vOTU-047716

Overview

vOTU representative UHGV-0203898

No. of genomes 14

Genome length 45,488 bps

Completeness 100.00% (complete)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047716
Number of genomes	14
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00135 › vGENUS-05710 › vSUBGEN-17797 › vOTU-047716
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0203898
BioSample	SAMN00066721
Genome length	45,488 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	75
CDS density	91.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0203898_1	Structural annotation	PF13560	NA	NA
UHGV-0203898_3	Structural annotation	PF12728, NF040990, COG3311	NA	NA
UHGV-0203898_6	UniRef90	UniRef90_A0A845R4W0	XRE family transcriptional regulator	NA
UHGV-0203898_6	eggNOG-mapper	742738.HMPREF9460_02486	NA	NA
UHGV-0203898_6	Structural annotation	PF13443, NF000090, COG1813	NA	NA
UHGV-0203898_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0203898_7	UniRef90	UniRef90_A0A1C6D4U5	Helix-turn-helix domain	NA
UHGV-0203898_7	eggNOG-mapper	1160721.RBI_I01471	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0203898_7	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0203898_7	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0203898_8	PHROG	phrog_87	metallo-protease	other
UHGV-0203898_8	UniRef90	UniRef90_A0A1Y3RG05	Peptidase_M78 domain-containing protein	NA
UHGV-0203898_8	eggNOG-mapper	1007096.BAGW01000011_gene2354	IrrE N-terminal-like domain	NA
UHGV-0203898_8	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0203898_8	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0203898_8	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0203898_9	UniRef90	UniRef90_UPI00189800B1	LITAF-like zinc ribbon domain-containing protein	NA
UHGV-0203898_9	eggNOG-mapper	218140.BPSY_1280	NA	NA
UHGV-0203898_9	Structural annotation	TIGR04165, COG3478	NA	NA
UHGV-0203898_10	PHROG	phrog_4980	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-0203898_10	eggNOG-mapper	411462.DORLON_00822	NA	NA
UHGV-0203898_10	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-0203898_12	KOfam	K01494	dcd; dCTP deaminase [EC:3.5.4.13]	NA
UHGV-0203898_12	UniRef90	UniRef90_R6HXT8	Deoxycytidine deaminase-like protein	NA
UHGV-0203898_12	eggNOG-mapper	591001.Acfer_0591	Belongs to the dCTP deaminase family	NA
UHGV-0203898_12	COG	COG0717	dCTP deaminase	NA
UHGV-0203898_12	Structural annotation	PF06559, MF_00146, TIGR02274, COG0717	NA	NA
UHGV-0203898_13	KOfam	K14059	int; integrase	NA
UHGV-0203898_13	PHROG	phrog_1	integrase	integration and excision
UHGV-0203898_13	UniRef90	UniRef90_A0A1C5N3H1	Integrase	NA
UHGV-0203898_13	eggNOG-mapper	1321814.HMPREF9089_00905	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0203898_13	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0203898_13	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0203898_13	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0203898_13	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0203898_14	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0203898_15	eggNOG-mapper	1408437.JNJN01000043_gene802	NA	NA
UHGV-0203898_16	PHROG	phrog_16490	NA	unknown function
UHGV-0203898_16	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0203898_18	eggNOG-mapper	445972.ANACOL_01878	NA	NA
UHGV-0203898_21	PHROG	phrog_21357	endolysin	lysis
UHGV-0203898_21	UniRef90	UniRef90_UPI00067EF636	CHAP domain-containing protein	NA
UHGV-0203898_21	eggNOG-mapper	1378168.N510_02471	NLP P60 protein	NA
UHGV-0203898_21	Pfam	PF05257	CHAP domain	CHAP
UHGV-0203898_21	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0203898_21	Structural annotation	PF00877, TIGR02594, COG0791	NA	NA
UHGV-0203898_22	PHROG	phrog_18218	NA	unknown function
UHGV-0203898_22	Structural annotation	PF06946	NA	NA
UHGV-0203898_24	PHROG	phrog_937	hemolysin	other
UHGV-0203898_24	eggNOG-mapper	445972.ANACOL_03381	NA	NA
UHGV-0203898_25	UniRef90	UniRef90_R6I1X1	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	NA
UHGV-0203898_25	eggNOG-mapper	552398.HMPREF0866_01159	NA	NA
UHGV-0203898_27	PHROG	phrog_5302	tail protein	tail
UHGV-0203898_27	UniRef90	UniRef90_R6M197	Ig-like_bact domain-containing protein	NA
UHGV-0203898_27	eggNOG-mapper	1203606.HMPREF1526_00261	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0203898_27	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0203898_27	Structural annotation	PF02368, MF_04116, NF010681, COG1262, COG1361	NA	NA
UHGV-0203898_28	KOfam	K19721	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	NA
UHGV-0203898_28	PHROG	phrog_819	tail protein	tail
UHGV-0203898_28	eggNOG-mapper	1203606.HMPREF1526_02029	Collagen triple helix repeat (20 copies)	NA
UHGV-0203898_28	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0203898_28	COG	COG1409	3',5'-cyclic AMP phosphodiesterase CpdA	NA
UHGV-0203898_30	PHROG	phrog_32744	NA	unknown function
UHGV-0203898_30	eggNOG-mapper	1120998.AUFC01000030_gene2247	NA	NA
UHGV-0203898_30	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-0203898_31	PHROG	phrog_1194	NA	unknown function
UHGV-0203898_31	eggNOG-mapper	1226322.HMPREF1545_00060	NA	NA
UHGV-0203898_31	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0203898_32	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0203898_32	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-0203898_32	COG	COG1511	NA	NA
UHGV-0203898_32	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-0203898_33	PHROG	phrog_8545	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UHGV-0203898_33	Pfam	PF12869	tRNA_anti-like	tRNA_anti-like
UHGV-0203898_34	PHROG	phrog_706	NA	unknown function
UHGV-0203898_34	UniRef90	UniRef90_UPI001D069FB9	Gp15 family bacteriophage protein	NA
UHGV-0203898_34	eggNOG-mapper	1235797.C816_04184	Bacteriophage Gp15 protein	NA
UHGV-0203898_34	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0203898_34	Structural annotation	PF06854	NA	NA
UHGV-0203898_35	PHROG	phrog_11299	NA	unknown function
UHGV-0203898_35	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0203898_35	Structural annotation	PF10666	NA	NA
UHGV-0203898_36	PHROG	phrog_3099	NA	unknown function
UHGV-0203898_36	eggNOG-mapper	1232443.BAIA02000078_gene23	NA	NA
UHGV-0203898_36	Structural annotation	PF10772, TIGR02126, COG3499	NA	NA
UHGV-0203898_37	PHROG	phrog_3266	tail completion	connector
UHGV-0203898_37	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0203898_37	Structural annotation	PF12691	NA	NA
UHGV-0203898_38	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0203898_38	UniRef90	UniRef90_A0A2U1BEM0	Minor capsid protein	NA
UHGV-0203898_38	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0203898_38	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0203898_38	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0203898_39	PHROG	phrog_3366	NA	unknown function
UHGV-0203898_39	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0203898_39	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0203898_40	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0203898_40	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-0203898_41	UniRef90	UniRef90_A0A8J6J3F8	Cadherin-like beta sandwich domain-containing protein	NA
UHGV-0203898_41	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0203898_42	PHROG	phrog_10	major head protein	head and packaging
UHGV-0203898_42	UniRef90	UniRef90_U2SBS0	Phage capsid family protein	NA
UHGV-0203898_42	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-0203898_42	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0203898_42	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0203898_42	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0203898_42	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0203898_43	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0203898_43	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-0203898_43	AcrCatalog	cluster_74817	NA	NA
UHGV-0203898_44	Structural annotation	PF11607, MF_00436, NF011232, COG1923	NA	NA
UHGV-0203898_45	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0203898_45	UniRef90	UniRef90_A0A1C5N7V1	Phage minor capsid protein 2	NA
UHGV-0203898_45	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0203898_45	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0203898_45	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-0203898_45	COG	COG2369	NA	NA
UHGV-0203898_45	Structural annotation	PF06152, PF15542, TIGR01641, COG2369	NA	NA
UHGV-0203898_46	PHROG	phrog_533	portal protein	head and packaging
UHGV-0203898_46	UniRef90	UniRef90_U2R2D2	Putative phage minor capsid protein	NA
UHGV-0203898_46	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-0203898_46	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0203898_46	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0203898_47	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0203898_47	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0203898_47	UniRef90	UniRef90_U2QJE0	Phage terminase, large subunit, PBSX family	NA
UHGV-0203898_47	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-0203898_47	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0203898_47	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0203898_47	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0203898_47	COG	COG1783	Phage terminase large subunit	NA
UHGV-0203898_47	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0203898_48	UniRef90	UniRef90_U2R3C0	Nascent polypeptide-associated complex domain protein	NA
UHGV-0203898_48	eggNOG-mapper	1226322.HMPREF1545_00042	NA	NA
UHGV-0203898_48	Structural annotation	PF13542	NA	NA
UHGV-0203898_50	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-0203898_50	UniRef90	UniRef90_A0A1C6B6A0	NA	NA
UHGV-0203898_50	eggNOG-mapper	1244856.K4PY83_9CAUD	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-0203898_50	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0203898_50	Structural annotation	PF18909	NA	NA
UHGV-0203898_51	PHROG	phrog_5692	NA	unknown function
UHGV-0203898_51	eggNOG-mapper	348058.B9UDH9_9CAUD	NA	NA
UHGV-0203898_55	PHROG	phrog_3377	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203898_55	eggNOG-mapper	1507.HMPREF0262_01169	NA	NA
UHGV-0203898_58	PHROG	phrog_3377	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203898_58	eggNOG-mapper	397290.C810_05173	NA	NA
UHGV-0203898_59	PHROG	phrog_37865	NA	unknown function
UHGV-0203898_62	PHROG	phrog_25732	NA	unknown function
UHGV-0203898_62	Structural annotation	PF21327, NF011240	NA	NA
UHGV-0203898_63	PHROG	phrog_954	DNA methyltransferase	other
UHGV-0203898_63	UniRef90	UniRef90_A0A845R569	Methyltransferase domain-containing protein	NA
UHGV-0203898_63	eggNOG-mapper	1280698.AUJS01000007_gene1028	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	NA
UHGV-0203898_63	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-0203898_63	Pfam	PF08241	Methyltransferase domain	Methyltransf_11
UHGV-0203898_63	COG	COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	NA
UHGV-0203898_63	Structural annotation	PF05148, MF_03044, NF033398, COG1041	NA	NA
UHGV-0203898_64	UniRef90	UniRef90_UPI001C3A10B1	Zinc ribbon domain-containing protein	NA
UHGV-0203898_65	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0203898_65	UniRef90	UniRef90_A0A4D7ASE3	DNA cytosine methyltransferase	NA
UHGV-0203898_65	eggNOG-mapper	742733.HMPREF9469_01835	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0203898_65	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0203898_65	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0203898_66	Structural annotation	PF20987	NA	NA
UHGV-0203898_67	PHROG	phrog_4632	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0203898_67	UniRef90	UniRef90_A0A7X8IB41	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0203898_67	eggNOG-mapper	469604.HMPREF0946_00819	NA	NA
UHGV-0203898_67	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0203898_68	PHROG	phrog_9804	NA	unknown function
UHGV-0203898_68	UniRef90	UniRef90_UPI0018976F94	replicative helicase loader/inhibitor	NA
UHGV-0203898_68	eggNOG-mapper	1121344.JHZO01000003_gene981	Loader and inhibitor of phage G40P	NA
UHGV-0203898_68	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0203898_68	Structural annotation	PF11417	NA	NA
UHGV-0203898_69	PHROG	phrog_16304	NA	unknown function
UHGV-0203898_69	UniRef90	UniRef90_UPI001E560709	NA	NA
UHGV-0203898_69	eggNOG-mapper	1035196.HMPREF9998_01752	NA	NA
UHGV-0203898_69	Pfam	PF19808	NA	DUF6291
UHGV-0203898_69	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0203898_69	Structural annotation	PF19808	NA	NA
UHGV-0203898_70	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0203898_70	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0203898_70	UniRef90	UniRef90_A0A8J7VJS5	Single-stranded DNA-binding protein	NA
UHGV-0203898_70	eggNOG-mapper	552398.HMPREF0866_02510	Single-stranded DNA-binding protein	NA
UHGV-0203898_70	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0203898_70	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0203898_70	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0203898_70	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0203898_70	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0203898_71	PHROG	phrog_4973	NA	unknown function
UHGV-0203898_71	UniRef90	UniRef90_UPI001D0904CC	helix-turn-helix domain-containing protein	NA
UHGV-0203898_71	eggNOG-mapper	1072685.IX83_07155	Helix-turn-helix domain	NA
UHGV-0203898_71	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-0203898_71	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-0203898_72	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203898_72	UniRef90	UniRef90_A0A2Z4QA94	Recombination protein	NA
UHGV-0203898_72	eggNOG-mapper	445972.ANACOL_01826	HNH nucleases	NA
UHGV-0203898_72	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0203898_73	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0203898_73	UniRef90	UniRef90_UPI001F3F3E5C	recombination protein NinB	NA
UHGV-0203898_73	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0203898_73	Structural annotation	PF05772	NA	NA
UHGV-0203898_74	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0203898_74	UniRef90	UniRef90_UPI001C126E67	ERF family protein	NA
UHGV-0203898_74	eggNOG-mapper	97138.C820_00777	ERF superfamily	NA
UHGV-0203898_74	Pfam	PF04404	ERF superfamily	ERF
UHGV-0203898_74	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0203898_75	PHROG	phrog_20532	NA	unknown function
UHGV-0203898_75	eggNOG-mapper	1280692.AUJL01000012_gene3222	NA	NA
UHGV-0203898_75	Structural annotation	PF00132	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0203898	Yes	45,488 bps	51.59%	100.00%	0.9814
UHGV-1280603	No	26,490 bps	52.97%	60.49%	0.9819
UHGV-1498123	No	25,721 bps	53.16%	59.75%	0.9822
UHGV-1425686	No	24,298 bps	52.78%	56.40%	0.9822
UHGV-1787983	No	19,821 bps	51.52%	46.08%	0.9822
UHGV-1580777	No	18,045 bps	52.40%	41.86%	0.9821
UHGV-1590654	No	18,214 bps	52.68%	41.83%	0.9821
UHGV-1777247	No	17,254 bps	52.74%	39.85%	0.9815
UHGV-0401269	No	15,075 bps	52.09%	34.52%	0.9798
UHGV-0268925	No	13,237 bps	52.11%	30.55%	0.9826
UHGV-1928786	No	12,587 bps	51.90%	28.99%	0.9824
UHGV-1970032	No	11,166 bps	51.72%	25.19%	0.9793
UHGV-1928784	No	10,704 bps	47.24%	22.47%	0.9737
UHGV-1937949	No	10,214 bps	55.17%	21.12%	0.9820