vOTU-047736

Overview

vOTU representative UHGV-0204074

No. of genomes 1

Genome length 38,513 bps

Completeness 100.00% (complete)

Host Clostridium paraputrificum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047736
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00984 › vGENUS-12687 › vSUBGEN-19539 › vOTU-047736
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium paraputrificum
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204074
BioSample	SAMN11031303
Genome length	38,513 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	57
CDS density	90.25%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204074_1	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0204074_1	UniRef90	UniRef90_UPI00189D84FA	replication terminator protein	NA
UHGV-0204074_1	eggNOG-mapper	1280689.AUJC01000003_gene943	replication terminator protein, phage associated	NA
UHGV-0204074_2	PHROG	phrog_25509	NA	unknown function
UHGV-0204074_2	eggNOG-mapper	1196322.A370_05735	NA	NA
UHGV-0204074_3	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0204074_3	UniRef90	UniRef90_A0A6B4KH41	DNA replication protein DnaD	NA
UHGV-0204074_3	eggNOG-mapper	1415774.U728_770	DnaD domain protein	NA
UHGV-0204074_3	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0204074_3	Structural annotation	PF09681, PF17214, MF_01819, TIGR01714, COG5529	NA	NA
UHGV-0204074_4	PHROG	phrog_674	NA	unknown function
UHGV-0204074_4	UniRef90	UniRef90_UPI00189D94AA	NA	NA
UHGV-0204074_4	eggNOG-mapper	1280689.AUJC01000003_gene937	NA	NA
UHGV-0204074_4	Pfam	PF07083	NA	DUF1351
UHGV-0204074_4	Structural annotation	PF07083	NA	NA
UHGV-0204074_5	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0204074_5	UniRef90	UniRef90_UPI000C086100	ERF family protein	NA
UHGV-0204074_5	eggNOG-mapper	1415775.U729_2586	ERF superfamily	NA
UHGV-0204074_5	Pfam	PF04404	ERF superfamily	ERF
UHGV-0204074_5	Structural annotation	PF04404	NA	NA
UHGV-0204074_7	PHROG	phrog_4292	NA	unknown function
UHGV-0204074_8	Structural annotation	PF18895, NF040614, COG0713	NA	NA
UHGV-0204074_9	PHROG	phrog_21773	NA	unknown function
UHGV-0204074_10	PHROG	phrog_7735	excisionase	integration and excision
UHGV-0204074_10	UniRef90	UniRef90_UPI0015D4F700	transcription factor	NA
UHGV-0204074_10	eggNOG-mapper	1499683.CCFF01000014_gene3568	NA	NA
UHGV-0204074_10	Structural annotation	PF21531, NF033787, COG3311	NA	NA
UHGV-0204074_11	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0204074_11	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0204074_11	UniRef90	UniRef90_UPI00189A939C	phage antirepressor KilAC domain-containing protein	NA
UHGV-0204074_11	eggNOG-mapper	1415775.U729_2580	BRO family, N-terminal domain	NA
UHGV-0204074_11	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0204074_11	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0204074_11	COG	COG3617	Prophage antirepressor	NA
UHGV-0204074_11	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-0204074_12	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0204074_12	UniRef90	UniRef90_UPI000C08CF07	helix-turn-helix domain-containing protein	NA
UHGV-0204074_12	eggNOG-mapper	1345695.CLSA_c04140	Helix-turn-helix XRE-family like proteins	NA
UHGV-0204074_12	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204074_13	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0204074_13	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204074_13	UniRef90	UniRef90_UPI0018AA4BEF	helix-turn-helix domain-containing protein	NA
UHGV-0204074_13	eggNOG-mapper	1134413.ANNK01000091_gene67	transcriptional	NA
UHGV-0204074_13	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0204074_13	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204074_13	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204074_13	Structural annotation	PF13443, MF_00535, NF041951, COG3655	NA	NA
UHGV-0204074_14	PHROG	phrog_1914	NA	unknown function
UHGV-0204074_14	UniRef90	UniRef90_UPI0006C3E0B5	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0204074_14	eggNOG-mapper	931276.Cspa_c07450	NA	NA
UHGV-0204074_14	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0204074_14	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0204074_14	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0204074_16	KOfam	K14059	int; integrase	NA
UHGV-0204074_16	PHROG	phrog_1	integrase	integration and excision
UHGV-0204074_16	UniRef90	UniRef90_UPI0018AA9F40	site-specific integrase	NA
UHGV-0204074_16	eggNOG-mapper	1280692.AUJL01000011_gene3214	Belongs to the 'phage' integrase family	NA
UHGV-0204074_16	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0204074_16	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0204074_16	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204074_16	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0204074_16	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0204074_17	PHROG	phrog_1758	acetyltransferase	other
UHGV-0204074_17	UniRef90	UniRef90_A0A060N362	Acetyltransferase, gnat family	NA
UHGV-0204074_17	eggNOG-mapper	717606.PaecuDRAFT_2625	acetyltransferase	NA
UHGV-0204074_17	Pfam	PF13673	Acetyltransferase (GNAT) domain	Acetyltransf_10
UHGV-0204074_17	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-0204074_17	Structural annotation	PF13673, MF_00824, NF010241, COG3153	NA	NA
UHGV-0204074_19	eggNOG-mapper	1415774.U728_182	NA	NA
UHGV-0204074_19	NCBIFam	TIGR04104.1	TIGR04104 family putative zinc finger protein	NA
UHGV-0204074_20	PHROG	phrog_2649	endolysin	lysis
UHGV-0204074_20	UniRef90	UniRef90_A0A7C6FL43	SH3 domain-containing protein	NA
UHGV-0204074_20	eggNOG-mapper	1280689.AUJC01000027_gene155	Peptidoglycan binding domain	NA
UHGV-0204074_20	Pfam	PF09374	Predicted Peptidoglycan domain	PG_binding_3
UHGV-0204074_20	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0204074_20	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0204074_21	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-0204074_21	PHROG	phrog_3088	amidase	lysis
UHGV-0204074_21	UniRef90	UniRef90_UPI0015D4A175	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204074_21	eggNOG-mapper	1280689.AUJC01000003_gene983	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0204074_21	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0204074_21	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0204074_21	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0204074_21	Structural annotation	PF01510, PF01471, MF_04111, NF008758, TIGR02869, COG5632, COG3409	NA	NA
UHGV-0204074_23	UniRef90	UniRef90_UPI00189AA7F1	hemolysin XhlA family protein	NA
UHGV-0204074_23	eggNOG-mapper	1294142.CINTURNW_1046	Haemolysin XhlA	NA
UHGV-0204074_23	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-0204074_24	PHROG	phrog_18444	NA	unknown function
UHGV-0204074_24	UniRef90	UniRef90_UPI0011788049	peptide chain release factor 2	NA
UHGV-0204074_24	eggNOG-mapper	1294142.CINTURNW_1043	NA	NA
UHGV-0204074_25	PHROG	phrog_16267	NA	unknown function
UHGV-0204074_25	UniRef90	UniRef90_U2NPC0	KID repeat-containing protein	NA
UHGV-0204074_25	eggNOG-mapper	1294142.CINTURNW_1706	Phage minor structural protein	NA
UHGV-0204074_25	Pfam	PF02018	Carbohydrate binding domain	CBM_4_9
UHGV-0204074_25	COG	COG4926	Phage-related protein	NA
UHGV-0204074_25	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0204074_26	PHROG	phrog_1401	NA	unknown function
UHGV-0204074_26	UniRef90	UniRef90_UPI0018ABCBD1	NA	NA
UHGV-0204074_26	eggNOG-mapper	1499683.CCFF01000014_gene3897	NA	NA
UHGV-0204074_26	Structural annotation	PF07761	NA	NA
UHGV-0204074_27	PHROG	phrog_1194	NA	unknown function
UHGV-0204074_27	eggNOG-mapper	1499683.CCFF01000014_gene3899	NA	NA
UHGV-0204074_27	Pfam	PF20458	NA	DUF6711
UHGV-0204074_27	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0204074_28	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0204074_28	UniRef90	UniRef90_A0A1I2KTM2	Phage-related protein	NA
UHGV-0204074_28	eggNOG-mapper	1321778.HMPREF1982_02681	SLT domain	NA
UHGV-0204074_28	COG	COG1511	NA	NA
UHGV-0204074_29	PHROG	phrog_2546	NA	unknown function
UHGV-0204074_29	UniRef90	UniRef90_A0A446IAV5	bPH_3 domain-containing protein	NA
UHGV-0204074_29	eggNOG-mapper	86416.Clopa_0586	NA	NA
UHGV-0204074_30	PHROG	phrog_8355	NA	unknown function
UHGV-0204074_30	UniRef90	UniRef90_UPI000665A2C9	Gp15 family bacteriophage protein	NA
UHGV-0204074_30	eggNOG-mapper	1280692.AUJL01000027_gene2152	NA	NA
UHGV-0204074_30	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0204074_30	Structural annotation	PF06854	NA	NA
UHGV-0204074_31	PHROG	phrog_8300	NA	unknown function
UHGV-0204074_31	eggNOG-mapper	1280692.AUJL01000027_gene2153	NA	NA
UHGV-0204074_31	Structural annotation	PF06896	NA	NA
UHGV-0204074_32	PHROG	phrog_820	major tail protein	tail
UHGV-0204074_32	eggNOG-mapper	1280692.AUJL01000027_gene2154	domain, Protein	NA
UHGV-0204074_32	COG	COG5492	NA	NA
UHGV-0204074_32	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0204074_34	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0204074_34	UniRef90	UniRef90_UPI000C08D995	minor capsid protein	NA
UHGV-0204074_34	eggNOG-mapper	1280692.AUJL01000027_gene2155	NA	NA
UHGV-0204074_34	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0204074_34	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0204074_35	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0204074_35	UniRef90	UniRef90_UPI000C085B44	minor capsid protein	NA
UHGV-0204074_35	eggNOG-mapper	1280692.AUJL01000027_gene2156	Minor capsid protein	NA
UHGV-0204074_35	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0204074_36	PHROG	phrog_8710	NA	unknown function
UHGV-0204074_36	UniRef90	UniRef90_UPI0018A9BDCF	ParB/RepB/Spo0J family partition protein	NA
UHGV-0204074_36	eggNOG-mapper	1294142.CINTURNW_1032	NA	NA
UHGV-0204074_36	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0204074_37	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0204074_37	eggNOG-mapper	1280692.AUJL01000027_gene2158	NA	NA
UHGV-0204074_38	PHROG	phrog_1378	NA	unknown function
UHGV-0204074_38	UniRef90	UniRef90_A0A0B3VH35	HALZ domain-containing protein	NA
UHGV-0204074_38	eggNOG-mapper	1280692.AUJL01000027_gene2159	NA	NA
UHGV-0204074_39	PHROG	phrog_422	major head protein	head and packaging
UHGV-0204074_39	UniRef90	UniRef90_UPI000C07344A	capsid protein	NA
UHGV-0204074_39	eggNOG-mapper	1280692.AUJL01000027_gene2160	NA	NA
UHGV-0204074_39	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0204074_40	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0204074_40	UniRef90	UniRef90_A0A0N7BTJ7	NA	NA
UHGV-0204074_40	eggNOG-mapper	1280692.AUJL01000027_gene2161	NA	NA
UHGV-0204074_40	AcrCatalog	cluster_74817	NA	NA
UHGV-0204074_40	Structural annotation	PF10788	NA	NA
UHGV-0204074_42	PHROG	phrog_1865	NA	unknown function
UHGV-0204074_42	Structural annotation	PF07073, MF_01077, NF037951, COG4568	NA	NA
UHGV-0204074_43	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0204074_43	UniRef90	UniRef90_UPI001896AD6F	polymorphic toxin type 50 domain-containing protein	NA
UHGV-0204074_43	eggNOG-mapper	1391647.AVSV01000003_gene1804	Phage minor capsid protein 2	NA
UHGV-0204074_43	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0204074_43	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-0204074_43	COG	COG2369	NA	NA
UHGV-0204074_43	Structural annotation	PF06152, TIGR01641	NA	NA
UHGV-0204074_44	PHROG	phrog_533	portal protein	head and packaging
UHGV-0204074_44	UniRef90	UniRef90_UPI001898ADC2	capsid protein	NA
UHGV-0204074_44	eggNOG-mapper	1280692.AUJL01000027_gene2165	NA	NA
UHGV-0204074_44	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0204074_45	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0204074_45	PHROG	phrog_10250	NA	unknown function
UHGV-0204074_45	UniRef90	UniRef90_UPI001898DC74	terminase family protein	NA
UHGV-0204074_45	eggNOG-mapper	1280692.AUJL01000027_gene2166	Phage terminase, large subunit, PBSX family	NA
UHGV-0204074_45	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0204074_45	COG	COG1783	Phage terminase large subunit	NA
UHGV-0204074_45	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0204074_46	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0204074_46	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0204074_46	UniRef90	UniRef90_UPI0011CAB70D	terminase small subunit	NA
UHGV-0204074_46	eggNOG-mapper	1294142.CINTURNW_1022	Terminase Small Subunit	NA
UHGV-0204074_46	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0204074_46	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0204074_46	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0204074_48	PHROG	phrog_9628	NA	unknown function
UHGV-0204074_48	UniRef90	UniRef90_UPI0018986DDA	DNA-binding response regulator	NA
UHGV-0204074_48	eggNOG-mapper	1121342.AUCO01000012_gene1709	NA	NA
UHGV-0204074_48	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-0204074_48	Structural annotation	PF06056, COG2771	NA	NA
UHGV-0204074_49	PHROG	phrog_38492	NA	unknown function
UHGV-0204074_49	UniRef90	UniRef90_UPI000C076F29	helix-turn-helix domain-containing protein	NA
UHGV-0204074_49	eggNOG-mapper	536233.CLO_0875	Helix-turn-helix	NA
UHGV-0204074_49	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0204074_49	Structural annotation	PF04545, MF_00674, NF009180, COG2771	NA	NA
UHGV-0204074_51	UniRef90	UniRef90_T4VFS3	Putative membrane protein	NA
UHGV-0204074_51	eggNOG-mapper	1391646.AVSU01000061_gene1065	NA	NA
UHGV-0204074_52	UniRef90	UniRef90_UPI00195E311F	ATPase	NA
UHGV-0204074_52	eggNOG-mapper	1294142.CINTURNW_1277	NA	NA
UHGV-0204074_53	Structural annotation	NF009256	NA	NA
UHGV-0204074_55	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0204074_55	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0204074_55	UniRef90	UniRef90_UPI00189B1822	single-stranded DNA-binding protein	NA
UHGV-0204074_55	eggNOG-mapper	1280689.AUJC01000014_gene1707	Single-stranded DNA-binding protein	NA
UHGV-0204074_55	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0204074_55	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0204074_55	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0204074_55	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0204074_55	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0204074_56	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0204074_56	UniRef90	UniRef90_A0A7X9XP27	NA	NA
UHGV-0204074_56	eggNOG-mapper	1280689.AUJC01000003_gene945	NA	NA
UHGV-0204074_56	Pfam	PF06356	NA	DUF1064
UHGV-0204074_56	Structural annotation	PF06356, MF_04160, NF033179, COG2887	NA	NA
UHGV-0204074_57	PHROG	phrog_1029	NA	unknown function
UHGV-0204074_57	eggNOG-mapper	1280689.AUJC01000003_gene944	NA	NA
UHGV-0204074_57	Structural annotation	PF10065, COG5532	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204074	Yes	38,513 bps	30.60%	100.00%	0.9735