vOTU-047766

Overview

vOTU representative UHGV-0204283

No. of genomes 18

Genome length 38,187 bps

Completeness 100.00% (complete)

Host Mediterraneibacter faecis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047766
Number of genomes	18
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00146 › vGENUS-00309 › vSUBGEN-01492 › vOTU-047766
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Mediterraneibacter › Mediterraneibacter faecis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204283
BioSample	NA
Genome length	38,187 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	55
CDS density	92.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204283_1	KOfam	K19719	COL2A; collagen type II alpha	NA
UHGV-0204283_1	PHROG	phrog_819	tail protein	tail
UHGV-0204283_1	UniRef90	UniRef90_UPI0006C6DE05	collagen-like protein	NA
UHGV-0204283_1	eggNOG-mapper	290402.Cbei_3387	NA	NA
UHGV-0204283_1	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0204283_3	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0204283_4	eggNOG-mapper	553973.CLOHYLEM_06551	to Mitochondrial intermediate peptidase K01410	NA
UHGV-0204283_4	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0204283_4	Structural annotation	NF012201	NA	NA
UHGV-0204283_5	KOfam	K03733	xerC; integrase/recombinase XerC	NA
UHGV-0204283_5	PHROG	phrog_1	integrase	integration and excision
UHGV-0204283_5	UniRef90	UniRef90_A0A844KCF3	Tyrosine-type recombinase/integrase	NA
UHGV-0204283_5	eggNOG-mapper	742765.HMPREF9457_03372	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0204283_5	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0204283_5	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204283_5	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0204283_5	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0204283_6	Structural annotation	PF17900	NA	NA
UHGV-0204283_8	UniRef90	UniRef90_A0A373CM53	Acyl carrier protein	NA
UHGV-0204283_8	eggNOG-mapper	1235799.C818_04237	NA	NA
UHGV-0204283_8	Structural annotation	PF14301	NA	NA
UHGV-0204283_9	PHROG	phrog_20274	NA	unknown function
UHGV-0204283_9	UniRef90	UniRef90_A0A173TUK0	Predicted membrane protein	NA
UHGV-0204283_9	eggNOG-mapper	1235799.C818_04238	Putative ABC-transporter type IV	NA
UHGV-0204283_9	Pfam	PF06541	Putative ABC-transporter type IV	ABC_trans_CmpB
UHGV-0204283_9	COG	COG4905	NA	NA
UHGV-0204283_9	Structural annotation	PF06541, COG4905	NA	NA
UHGV-0204283_10	PHROG	phrog_1863	NA	unknown function
UHGV-0204283_10	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-0204283_11	PHROG	phrog_18218	NA	unknown function
UHGV-0204283_11	UniRef90	UniRef90_A0A373SUI3	Ribonuclease	NA
UHGV-0204283_11	eggNOG-mapper	658655.HMPREF0988_02546	NA	NA
UHGV-0204283_11	Structural annotation	PF06946	NA	NA
UHGV-0204283_12	Structural annotation	PF13384, NF001074, COG3677	NA	NA
UHGV-0204283_13	KOfam	K07273	acm; lysozyme	NA
UHGV-0204283_13	PHROG	phrog_291	endolysin	lysis
UHGV-0204283_13	UniRef90	UniRef90_A0A564SYY2	Glycosyl hydrolases family 25	NA
UHGV-0204283_13	eggNOG-mapper	515620.EUBELI_01316	Glycoside Hydrolase Family 25-like lysozyme endolysin	NA
UHGV-0204283_13	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0204283_13	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0204283_13	Structural annotation	PF01183, NF003627, COG3757, COG5492	NA	NA
UHGV-0204283_14	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0204283_14	PHROG	phrog_95	integrase	integration and excision
UHGV-0204283_14	UniRef90	UniRef90_A0A374E9M4	Recombinase family protein	NA
UHGV-0204283_14	eggNOG-mapper	97139.C824_00068	Recombinase	NA
UHGV-0204283_14	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0204283_14	Pfam	PF07508	Recombinase	Recombinase
UHGV-0204283_14	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0204283_14	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0204283_15	KOfam	K10716	kch, trkA, mthK, pch; voltage-gated potassium channel	NA
UHGV-0204283_15	PHROG	phrog_7872	NA	unknown function
UHGV-0204283_15	UniRef90	UniRef90_A0A373MPY2	Ion channel	NA
UHGV-0204283_15	eggNOG-mapper	411459.RUMOBE_00964	Ion channel	NA
UHGV-0204283_15	Pfam	PF07885	Ion channel	Ion_trans_2
UHGV-0204283_15	COG	COG1226	Voltage-gated potassium channel Kch	NA
UHGV-0204283_15	Structural annotation	PF07885, NF040645	NA	NA
UHGV-0204283_16	PHROG	phrog_38135	NA	unknown function
UHGV-0204283_16	UniRef90	UniRef90_UPI001F3985DB	NA	NA
UHGV-0204283_16	eggNOG-mapper	411465.PEPMIC_00706	NA	NA
UHGV-0204283_16	Pfam	PF14020	NA	DUF4236
UHGV-0204283_16	COG	COG0457	Tetratricopeptide (TPR) repeat	NA
UHGV-0204283_16	Structural annotation	PF14020	NA	NA
UHGV-0204283_18	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0204283_18	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204283_18	UniRef90	UniRef90_A0A3E4LWU1	XRE family transcriptional regulator	NA
UHGV-0204283_18	eggNOG-mapper	445972.ANACOL_03315	NA	NA
UHGV-0204283_18	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204283_18	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204283_18	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0204283_21	PHROG	phrog_20330	NA	unknown function
UHGV-0204283_21	eggNOG-mapper	565664.EFXG_02669	NA	NA
UHGV-0204283_22	Structural annotation	PF11195	NA	NA
UHGV-0204283_26	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0204283_26	eggNOG-mapper	665950.HMPREF1025_02552	NA	NA
UHGV-0204283_26	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0204283_27	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0204283_27	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0204283_27	UniRef90	UniRef90_D4M578	Ribonuclease HI	NA
UHGV-0204283_27	eggNOG-mapper	665950.HMPREF1025_02551	RNase H	NA
UHGV-0204283_27	Pfam	PF00075	RNase H	RNase_H
UHGV-0204283_27	COG	COG0328	Ribonuclease HI	NA
UHGV-0204283_27	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0204283_28	eggNOG-mapper	1280698.AUJS01000007_gene1016	NA	NA
UHGV-0204283_29	PHROG	phrog_4433	NA	unknown function
UHGV-0204283_29	eggNOG-mapper	1280698.AUJS01000007_gene1017	NA	NA
UHGV-0204283_30	PHROG	phrog_8470	NA	unknown function
UHGV-0204283_30	UniRef90	UniRef90_UPI001C01E393	PcfJ domain-containing protein	NA
UHGV-0204283_30	eggNOG-mapper	1280698.AUJS01000007_gene1018	NA	NA
UHGV-0204283_30	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0204283_30	Structural annotation	PF14284	NA	NA
UHGV-0204283_31	PHROG	phrog_15077	NA	unknown function
UHGV-0204283_31	UniRef90	UniRef90_A0A3A6HZA9	NA	NA
UHGV-0204283_31	eggNOG-mapper	1280698.AUJS01000007_gene1019	NA	NA
UHGV-0204283_31	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0204283_32	PHROG	phrog_7566	NA	unknown function
UHGV-0204283_32	eggNOG-mapper	665950.HMPREF1025_02547	NA	NA
UHGV-0204283_34	PHROG	phrog_8684	NA	unknown function
UHGV-0204283_34	UniRef90	UniRef90_A0A844KDL0	YopX domain-containing protein	NA
UHGV-0204283_34	eggNOG-mapper	457412.RSAG_01162	YopX protein	NA
UHGV-0204283_34	Pfam	PF09643	YopX protein	YopX
UHGV-0204283_34	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0204283_34	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0204283_37	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0204283_37	UniRef90	UniRef90_UPI001899709D	NA	NA
UHGV-0204283_37	eggNOG-mapper	658655.HMPREF0988_02569	sigma factor activity	NA
UHGV-0204283_37	Pfam	PF07374	NA	DUF1492
UHGV-0204283_37	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0204283_37	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-0204283_38	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0204283_38	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204283_38	UniRef90	UniRef90_A0A1Q6K9L9	HNHc domain-containing protein	NA
UHGV-0204283_38	eggNOG-mapper	1232452.BAIB02000007_gene1631	HNH nucleases	NA
UHGV-0204283_38	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0204283_38	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0204283_39	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0204283_39	UniRef90	UniRef90_A0A1C5LZF0	Phage terminase, small subunit	NA
UHGV-0204283_39	eggNOG-mapper	926561.KB900623_gene765	NA	NA
UHGV-0204283_39	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0204283_39	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0204283_40	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0204283_40	UniRef90	UniRef90_D4M588	Phage terminase-like protein, large subunit	NA
UHGV-0204283_40	eggNOG-mapper	1232452.BAIB02000007_gene1629	Phage terminase-like protein large subunit	NA
UHGV-0204283_40	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0204283_40	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0204283_40	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0204283_40	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0204283_41	PHROG	phrog_12	portal protein	head and packaging
UHGV-0204283_41	UniRef90	UniRef90_A0A844KEF3	Phage portal protein	NA
UHGV-0204283_41	eggNOG-mapper	1232452.BAIB02000007_gene1627	Phage portal protein, HK97 family	NA
UHGV-0204283_41	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0204283_41	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0204283_41	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0204283_42	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0204283_42	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0204283_42	UniRef90	UniRef90_D4M590	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0204283_42	eggNOG-mapper	1235792.C808_00085	Clp protease	NA
UHGV-0204283_42	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0204283_42	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0204283_42	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0204283_43	PHROG	phrog_10	major head protein	head and packaging
UHGV-0204283_43	UniRef90	UniRef90_A0A844KDK0	Phage major capsid protein	NA
UHGV-0204283_43	eggNOG-mapper	1232452.BAIB02000007_gene1625	Phage capsid family	NA
UHGV-0204283_43	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0204283_43	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0204283_43	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0204283_43	Structural annotation	PF05065, TIGR01554, COG4653	NA	NA
UHGV-0204283_45	UniRef90	UniRef90_A0A844KCF4	Phage head closure protein	NA
UHGV-0204283_45	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0204283_45	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0204283_46	Structural annotation	PF05657	NA	NA
UHGV-0204283_47	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0204283_47	UniRef90	UniRef90_D4M595	Phage protein, HK97 gp10 family	NA
UHGV-0204283_47	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0204283_47	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-0204283_48	PHROG	phrog_88	major tail protein	tail
UHGV-0204283_48	UniRef90	UniRef90_D4M596	Phage major tail protein, phi13 family	NA
UHGV-0204283_48	Pfam	PF04630	Phage tail tube protein	Phage_TTP_1
UHGV-0204283_48	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0204283_48	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0204283_50	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0204283_50	PHROG	phrog_23464	NA	unknown function
UHGV-0204283_50	UniRef90	UniRef90_A0A7G5N113	Phage tail tape measure protein	NA
UHGV-0204283_50	eggNOG-mapper	1232452.BAIB02000007_gene1616	phage tail tape measure protein	NA
UHGV-0204283_50	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0204283_51	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0204283_51	UniRef90	UniRef90_A0A844KEE5	Phage tail protein	NA
UHGV-0204283_51	eggNOG-mapper	1232452.BAIB02000007_gene1615	phage tail	NA
UHGV-0204283_51	COG	COG4722	Phage-related protein YomH	NA
UHGV-0204283_51	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0204283_52	PHROG	phrog_13289	tail protein	tail
UHGV-0204283_52	UniRef90	UniRef90_A0A844KBR1	Prophage_tail domain-containing protein	NA
UHGV-0204283_52	eggNOG-mapper	1235798.C817_02568	Prophage endopeptidase tail	NA
UHGV-0204283_52	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0204283_52	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0204283_52	COG	COG2885	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	NA
UHGV-0204283_52	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0204283_53	PHROG	phrog_14030	NA	unknown function
UHGV-0204283_53	UniRef90	UniRef90_A0A844KDJ1	Peptidase M23	NA
UHGV-0204283_53	eggNOG-mapper	33035.JPJF01000093_gene2240	NlpC/P60 family	NA
UHGV-0204283_53	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0204283_53	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-0204283_53	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0204283_53	Structural annotation	PF18013, PF05382, NF033742, COG0791	NA	NA
UHGV-0204283_54	PHROG	phrog_6320	tail fiber protein	tail
UHGV-0204283_54	UniRef90	UniRef90_A0A374E9Q0	Collagen-like protein	NA
UHGV-0204283_54	eggNOG-mapper	1232452.BAIB02000007_gene1610	NA	NA
UHGV-0204283_54	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0204283_54	Structural annotation	PF10651, NF007636, COG5456	NA	NA
UHGV-0204283_55	PHROG	phrog_16164	NA	unknown function
UHGV-0204283_55	eggNOG-mapper	33035.JPJF01000093_gene2236	NA	NA
UHGV-0204283_55	Structural annotation	PF10651, NF032891	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204283	Yes	38,187 bps	42.55%	100.00%	0.9776
UHGV-0390318	No	38,629 bps	42.34%	99.90%	0.9775
UHGV-1357966	No	36,624 bps	42.85%	98.93%	0.9785
UHGV-1377205	No	36,084 bps	42.86%	98.84%	0.9792
UHGV-1524964	No	35,529 bps	42.73%	95.97%	0.9789
UHGV-0078240	No	32,700 bps	42.99%	89.70%	0.9768
UHGV-1450261	No	26,696 bps	43.85%	74.71%	0.9811
UHGV-2095684	No	27,151 bps	42.40%	74.39%	0.9752
UHGV-1968847	No	25,100 bps	42.63%	70.27%	0.9810
UHGV-2089778	No	23,578 bps	42.57%	64.60%	0.9758
UHGV-1467062	No	22,453 bps	43.06%	62.87%	0.9786
UHGV-2180843	No	21,754 bps	42.71%	60.93%	0.9779
UHGV-2182873	No	21,731 bps	42.77%	59.58%	0.9792
UHGV-1973857	No	21,241 bps	42.76%	59.29%	0.9780
UHGV-1399436	No	19,207 bps	43.02%	53.82%	0.9824
UHGV-1399733	No	19,140 bps	42.95%	53.65%	0.9802
UHGV-0383549	No	18,753 bps	42.68%	51.38%	0.9805
UHGV-0387540	No	16,664 bps	43.30%	47.28%	0.9821