vOTU-047842

Overview

vOTU representative UHGV-0204773

No. of genomes 1

Genome length 37,844 bps

Completeness 100.00% (complete)

Host Coprococcus eutactus A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047842
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-03866 › vGENUS-06089 › vSUBGEN-31720 › vOTU-047842
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Coprococcus › Coprococcus eutactus A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0204773
BioSample	NA
Genome length	37,844 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	57
CDS density	85.86%
tRNA count	2
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204773_3	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0204773_3	eggNOG-mapper	411468.CLOSCI_00558	NA	NA
UHGV-0204773_3	Structural annotation	PF21578	NA	NA
UHGV-0204773_4	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0204773_4	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0204773_4	UniRef90	UniRef90_A0A3C1XFU0	Single-stranded DNA-binding protein	NA
UHGV-0204773_4	eggNOG-mapper	1232447.BAHW02000038_gene2652	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0204773_4	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0204773_4	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0204773_4	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0204773_4	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0204773_4	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0204773_5	PHROG	phrog_7566	NA	unknown function
UHGV-0204773_5	eggNOG-mapper	1410650.JHWL01000003_gene2846	NA	NA
UHGV-0204773_7	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0204773_7	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0204773_7	UniRef90	UniRef90_UPI001EDA24F8	ribonuclease HI	NA
UHGV-0204773_7	eggNOG-mapper	795359.TOPB45_1464	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate	NA
UHGV-0204773_7	Pfam	PF00075	RNase H	RNase_H
UHGV-0204773_7	COG	COG0274	Deoxyribose-phosphate aldolase	NA
UHGV-0204773_8	PHROG	phrog_9958	NA	unknown function
UHGV-0204773_8	UniRef90	UniRef90_R5L718	NA	NA
UHGV-0204773_8	eggNOG-mapper	742735.HMPREF9467_00814	NA	NA
UHGV-0204773_8	Structural annotation	PF19789	NA	NA
UHGV-0204773_9	PHROG	phrog_9958	NA	unknown function
UHGV-0204773_9	UniRef90	UniRef90_A0A3E5ENL3	NA	NA
UHGV-0204773_9	eggNOG-mapper	658655.HMPREF0988_00873	NA	NA
UHGV-0204773_9	Pfam	PF19789	NA	DUF6273
UHGV-0204773_9	Structural annotation	PF19789	NA	NA
UHGV-0204773_10	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0204773_10	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0204773_10	UniRef90	UniRef90_UPI000CF24562	DNA cytosine methyltransferase	NA
UHGV-0204773_10	eggNOG-mapper	1235792.C808_05321	C-5 cytosine-specific DNA methylase	NA
UHGV-0204773_10	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0204773_10	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0204773_10	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0204773_10	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0204773_11	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0204773_11	UniRef90	UniRef90_UPI001C1E60AD	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0204773_11	eggNOG-mapper	1232447.BAHW02000005_gene152	NA	NA
UHGV-0204773_11	Structural annotation	PF07374, MF_00674, NF001074	NA	NA
UHGV-0204773_12	AcrCatalog	cluster_86620	NA	NA
UHGV-0204773_13	UniRef90	UniRef90_A0A174BR74	Chemotaxis protein	NA
UHGV-0204773_13	eggNOG-mapper	658088.HMPREF0987_01711	NA	NA
UHGV-0204773_13	Structural annotation	NF008671, COG4710	NA	NA
UHGV-0204773_15	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-0204773_15	UniRef90	UniRef90_UPI001D0DE0A6	P27 family phage terminase small subunit	NA
UHGV-0204773_15	eggNOG-mapper	1158604.I591_01771	Phage terminase, small subunit	NA
UHGV-0204773_15	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0204773_15	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0204773_15	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0204773_16	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0204773_16	UniRef90	UniRef90_A0A3E2WD31	Terminase large subunit	NA
UHGV-0204773_16	eggNOG-mapper	1232453.BAIF02000028_gene2720	Phage Terminase	NA
UHGV-0204773_16	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0204773_16	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0204773_16	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0204773_16	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-0204773_17	PHROG	phrog_12	portal protein	head and packaging
UHGV-0204773_17	UniRef90	UniRef90_A0A414B8G4	Phage portal protein	NA
UHGV-0204773_17	eggNOG-mapper	1235798.C817_04583	Phage portal protein, HK97 family	NA
UHGV-0204773_17	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0204773_17	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0204773_17	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0204773_17	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0204773_18	KOfam	K06904	NA	NA
UHGV-0204773_18	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0204773_18	UniRef90	UniRef90_UPI001D141099	HK97 family phage prohead protease	NA
UHGV-0204773_18	eggNOG-mapper	1232446.BAIE02000002_gene825	Phage prohead protease, HK97 family	NA
UHGV-0204773_18	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0204773_18	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0204773_18	COG	COG3740	Phage head maturation protease	NA
UHGV-0204773_18	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0204773_19	PHROG	phrog_10	major head protein	head and packaging
UHGV-0204773_19	UniRef90	UniRef90_A0A414B839	Phage major capsid protein	NA
UHGV-0204773_19	eggNOG-mapper	1235798.C817_04585	phage major capsid protein, HK97 family	NA
UHGV-0204773_19	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0204773_19	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0204773_19	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0204773_19	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0204773_20	PHROG	phrog_2550	NA	unknown function
UHGV-0204773_20	UniRef90	UniRef90_UPI0008717716	phage head-tail connector protein	NA
UHGV-0204773_20	eggNOG-mapper	1232446.BAIE02000002_gene827	NA	NA
UHGV-0204773_20	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0204773_21	PHROG	phrog_19734	NA	unknown function
UHGV-0204773_21	UniRef90	UniRef90_A0A3R6AW46	Head-tail adaptor protein	NA
UHGV-0204773_21	eggNOG-mapper	1235798.C817_04587	NA	NA
UHGV-0204773_21	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0204773_22	eggNOG-mapper	1235798.C817_04588	NA	NA
UHGV-0204773_22	Structural annotation	PF05657	NA	NA
UHGV-0204773_23	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0204773_23	UniRef90	UniRef90_R6FMT8	HK97 gp10 family phage protein	NA
UHGV-0204773_23	eggNOG-mapper	33035.JPJF01000039_gene277	NA	NA
UHGV-0204773_23	Structural annotation	TIGR01725	NA	NA
UHGV-0204773_24	PHROG	phrog_88	major tail protein	tail
UHGV-0204773_24	UniRef90	UniRef90_A0A3R6A072	Phage tail protein	NA
UHGV-0204773_24	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-0204773_24	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0204773_24	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0204773_25	eggNOG-mapper	1235798.C817_04591	NA	NA
UHGV-0204773_25	Structural annotation	PF11836	NA	NA
UHGV-0204773_26	KOfam	K05636	LAMB1; laminin, beta 1	NA
UHGV-0204773_26	PHROG	phrog_5218	NA	unknown function
UHGV-0204773_26	UniRef90	UniRef90_A0A3R6ARL8	PhageMin_Tail domain-containing protein	NA
UHGV-0204773_26	eggNOG-mapper	1235798.C817_04592	Phage-related minor tail protein	NA
UHGV-0204773_26	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0204773_26	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0204773_26	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0204773_27	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0204773_27	UniRef90	UniRef90_A0A3R6C171	Phage tail protein	NA
UHGV-0204773_27	eggNOG-mapper	1235798.C817_04593	phage tail	NA
UHGV-0204773_27	COG	COG4722	Phage-related protein YomH	NA
UHGV-0204773_27	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0204773_28	PHROG	phrog_13289	tail protein	tail
UHGV-0204773_28	UniRef90	UniRef90_UPI001570BE36	phage tail protein	NA
UHGV-0204773_28	eggNOG-mapper	1235798.C817_02568	Prophage endopeptidase tail	NA
UHGV-0204773_28	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0204773_28	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0204773_28	COG	COG2885	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	NA
UHGV-0204773_28	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0204773_29	PHROG	phrog_11037	NA	unknown function
UHGV-0204773_29	UniRef90	UniRef90_A0A843GNG3	CHAP domain-containing protein	NA
UHGV-0204773_29	eggNOG-mapper	33035.JPJF01000093_gene2240	NlpC/P60 family	NA
UHGV-0204773_29	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0204773_29	Pfam	PF05257	CHAP domain	CHAP
UHGV-0204773_29	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0204773_29	Structural annotation	PF18013, PF00877, NF006360, COG3942	NA	NA
UHGV-0204773_30	UniRef90	UniRef90_A0A412UTG5	Collagen-like protein	NA
UHGV-0204773_31	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-0204773_31	PHROG	phrog_11157	NA	unknown function
UHGV-0204773_31	UniRef90	UniRef90_A0A1M5CXW0	Big_13 domain-containing protein	NA
UHGV-0204773_31	eggNOG-mapper	33035.JPJF01000023_gene3227	NA	NA
UHGV-0204773_31	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0204773_31	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0204773_31	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0204773_32	PHROG	phrog_32322	NA	unknown function
UHGV-0204773_32	UniRef90	UniRef90_A0A414W315	Ig-like_bact domain-containing protein	NA
UHGV-0204773_32	eggNOG-mapper	1232446.BAIE02000011_gene1581	NA	NA
UHGV-0204773_32	Pfam	PF13754	NA	Big_3_4
UHGV-0204773_32	Structural annotation	PF13754	NA	NA
UHGV-0204773_33	eggNOG-mapper	1280698.AUJS01000007_gene1056	NA	NA
UHGV-0204773_33	Structural annotation	PF07703, NF038114, COG5501	NA	NA
UHGV-0204773_37	KOfam	K03733	xerC; integrase/recombinase XerC	NA
UHGV-0204773_37	PHROG	phrog_1	integrase	integration and excision
UHGV-0204773_37	UniRef90	UniRef90_A0A3A9BYI5	Integrase	NA
UHGV-0204773_37	eggNOG-mapper	1235793.C809_01951	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0204773_37	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0204773_37	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204773_37	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0204773_37	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0204773_39	PHROG	phrog_1863	NA	unknown function
UHGV-0204773_39	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-0204773_40	PHROG	phrog_1129	holin	lysis
UHGV-0204773_40	UniRef90	UniRef90_A0A4R2L6M0	Holin family Hol44 protein (Superfamily V)	NA
UHGV-0204773_40	eggNOG-mapper	1121115.AXVN01000006_gene2171	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0204773_40	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0204773_40	Structural annotation	PF16079	NA	NA
UHGV-0204773_41	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0204773_41	PHROG	phrog_3088	amidase	lysis
UHGV-0204773_41	UniRef90	UniRef90_A0A412AXM4	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0204773_41	eggNOG-mapper	428125.CLOLEP_01782	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204773_41	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0204773_41	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0204773_41	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0204773_42	KOfam	K14059	int; integrase	NA
UHGV-0204773_42	PHROG	phrog_1	integrase	integration and excision
UHGV-0204773_42	UniRef90	UniRef90_A0A2Y9BHA4	Site-specific recombinase XerD	NA
UHGV-0204773_42	eggNOG-mapper	476272.RUMHYD_01729	Belongs to the 'phage' integrase family	NA
UHGV-0204773_42	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0204773_42	Structural annotation	PF00589, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0204773_44	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0204773_44	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0204773_44	UniRef90	UniRef90_R6QF53	Putative repressor LexA	NA
UHGV-0204773_44	eggNOG-mapper	411490.ANACAC_00815	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0204773_44	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0204773_44	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0204773_44	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0204773_44	Structural annotation	PF01381, PF00717, MF_00015, NF041951, COG1396	NA	NA
UHGV-0204773_45	PHROG	phrog_87	metallo-protease	other
UHGV-0204773_45	UniRef90	UniRef90_R5C1M2	Peptidase_M78 domain-containing protein	NA
UHGV-0204773_45	eggNOG-mapper	476272.RUMHYD_01733	IrrE N-terminal-like domain	NA
UHGV-0204773_45	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0204773_45	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0204773_45	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0204773_46	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204773_46	UniRef90	UniRef90_A0A0X8VBR8	Helix-turn-helix domain protein	NA
UHGV-0204773_46	eggNOG-mapper	1235802.C823_04750	Helix-turn-helix XRE-family like proteins	NA
UHGV-0204773_46	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0204773_46	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204773_46	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0204773_47	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204773_47	UniRef90	UniRef90_A0A6A8V5Y2	Helix-turn-helix domain-containing protein	NA
UHGV-0204773_47	eggNOG-mapper	226185.EF_2040	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0204773_47	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0204773_47	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204773_47	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0204773_49	Structural annotation	PF21441, TIGR04176, COG1846	NA	NA
UHGV-0204773_51	PHROG	phrog_643	transcriptional regulator	transcription regulation
UHGV-0204773_51	UniRef90	UniRef90_A0A3E3JYK8	NA	NA
UHGV-0204773_51	eggNOG-mapper	562743.JH976434_gene1050	NA	NA
UHGV-0204773_52	UniRef90	UniRef90_UPI0012906A75	zinc ribbon domain-containing protein	NA
UHGV-0204773_53	PHROG	phrog_750	NA	unknown function
UHGV-0204773_53	eggNOG-mapper	97139.C824_00051	NA	NA
UHGV-0204773_53	Structural annotation	PF13835, NF040858	NA	NA
UHGV-0204773_56	Structural annotation	PF10743, NF040990	NA	NA
UHGV-0204773_57	PHROG	phrog_34638	NA	unknown function

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204773	Yes	37,844 bps	40.95%	100.00%	0.9777