vOTU-047854

Overview

vOTU representative UHGV-0204851

No. of genomes 3

Genome length 46,133 bps

Completeness 100.00% (complete)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047854
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 › vSUBFAM-00537 › vGENUS-18893 › vSUBGEN-36197 › vOTU-047854
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204851
BioSample	SAMN09781762
Genome length	46,133 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	82
CDS density	91.77%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204851_1	PHROG	phrog_7964	NA	unknown function
UHGV-0204851_1	eggNOG-mapper	665950.HMPREF1025_02555	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0204851_1	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-0204851_1	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0204851_5	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-0204851_5	UniRef90	UniRef90_A0A658JVV7	Radical SAM protein (Fragment)	NA
UHGV-0204851_5	eggNOG-mapper	1235793.C809_02647	NA	NA
UHGV-0204851_5	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-0204851_6	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0204851_6	UniRef90	UniRef90_A0A3A8YXV0	Class V aminotransferase	NA
UHGV-0204851_6	eggNOG-mapper	478749.BRYFOR_09719	NA	NA
UHGV-0204851_6	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0204851_6	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0204851_6	Structural annotation	PF01507, MF_00064	NA	NA
UHGV-0204851_7	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0204851_7	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0204851_7	UniRef90	UniRef90_A0A3R6DF97	Cytosine-specific methyltransferase	NA
UHGV-0204851_7	eggNOG-mapper	1499683.CCFF01000005_gene54	PFAM C-5 cytosine-specific DNA methylase	NA
UHGV-0204851_7	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0204851_7	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0204851_7	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0204851_7	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0204851_7	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0204851_9	UniRef90	UniRef90_A0A1C5S2Z1	C2H2-type domain-containing protein	NA
UHGV-0204851_10	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0204851_10	UniRef90	UniRef90_UPI001186151F	Lar family restriction alleviation protein	NA
UHGV-0204851_10	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0204851_12	PHROG	phrog_874	NA	unknown function
UHGV-0204851_12	UniRef90	UniRef90_UPI0018F57B3A	ASCH domain-containing protein	NA
UHGV-0204851_12	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0204851_12	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0204851_16	PHROG	phrog_8684	NA	unknown function
UHGV-0204851_16	UniRef90	UniRef90_UPI000677CD2A	YopX family protein	NA
UHGV-0204851_16	eggNOG-mapper	457412.RSAG_01162	YopX protein	NA
UHGV-0204851_16	Pfam	PF09643	YopX protein	YopX
UHGV-0204851_16	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0204851_16	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0204851_17	eggNOG-mapper	397290.C810_01492	NA	NA
UHGV-0204851_17	Structural annotation	PF11302	NA	NA
UHGV-0204851_18	PHROG	phrog_7711	NA	unknown function
UHGV-0204851_18	UniRef90	UniRef90_A0A0N7JDH6	NA	NA
UHGV-0204851_18	eggNOG-mapper	1304866.K413DRAFT_1204	NA	NA
UHGV-0204851_20	PHROG	phrog_419	NA	unknown function
UHGV-0204851_20	eggNOG-mapper	476272.RUMHYD_03324	NA	NA
UHGV-0204851_24	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0204851_24	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0204851_24	UniRef90	UniRef90_A0A1C6CDG5	Phage terminase, large subunit, PBSX family	NA
UHGV-0204851_24	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-0204851_24	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0204851_24	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0204851_24	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0204851_24	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0204851_24	COG	COG1783	Phage terminase large subunit	NA
UHGV-0204851_24	Structural annotation	PF04466, PF17288, PF03592, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0204851_25	PHROG	phrog_533	portal protein	head and packaging
UHGV-0204851_25	UniRef90	UniRef90_A0A1C6CDM8	Phage portal protein, putative, A118 family	NA
UHGV-0204851_25	eggNOG-mapper	33035.JPJF01000106_gene3135	phage minor capsid protein	NA
UHGV-0204851_25	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0204851_27	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0204851_27	UniRef90	UniRef90_A0A1C6CDG2	Phage minor capsid protein 2	NA
UHGV-0204851_27	eggNOG-mapper	33035.JPJF01000106_gene3134	Phage minor capsid protein 2	NA
UHGV-0204851_27	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0204851_27	COG	COG2369	NA	NA
UHGV-0204851_27	Structural annotation	PF06152	NA	NA
UHGV-0204851_28	UniRef90	UniRef90_A0A417UWY7	CTP synthase	NA
UHGV-0204851_28	eggNOG-mapper	476272.RUMHYD_01766	NA	NA
UHGV-0204851_29	PHROG	phrog_21718	NA	unknown function
UHGV-0204851_29	UniRef90	UniRef90_A0A8D9PDT7	Membrane fusogenic activity protein	NA
UHGV-0204851_29	eggNOG-mapper	1235790.C805_00058	NA	NA
UHGV-0204851_31	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0204851_32	PHROG	phrog_20016	NA	unknown function
UHGV-0204851_32	UniRef90	UniRef90_A0A316MV88	BclA_C domain-containing protein	NA
UHGV-0204851_32	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0204851_32	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0204851_33	Structural annotation	PF00210, MF_01441, NF011597, COG1528	NA	NA
UHGV-0204851_35	UniRef90	UniRef90_UPI001C0EBA51	phage scaffolding protein	NA
UHGV-0204851_35	eggNOG-mapper	742765.HMPREF9457_02126	COG NOG36366 non supervised orthologous group	NA
UHGV-0204851_36	PHROG	phrog_247	major head protein	head and packaging
UHGV-0204851_36	UniRef90	UniRef90_UPI001BA5448B	major capsid protein	NA
UHGV-0204851_36	eggNOG-mapper	33035.JPJF01000106_gene3132	NA	NA
UHGV-0204851_36	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0204851_37	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0204851_37	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-0204851_38	PHROG	phrog_18218	NA	unknown function
UHGV-0204851_38	UniRef90	UniRef90_A0A8D9PGR5	Holin	NA
UHGV-0204851_38	eggNOG-mapper	411902.CLOBOL_03424	NA	NA
UHGV-0204851_38	Structural annotation	PF06946	NA	NA
UHGV-0204851_39	PHROG	phrog_8680	NA	unknown function
UHGV-0204851_39	UniRef90	UniRef90_A0A412EKN2	NA	NA
UHGV-0204851_39	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-0204851_39	Pfam	PF14386	NA	DUF4417
UHGV-0204851_39	Structural annotation	PF14386	NA	NA
UHGV-0204851_41	PHROG	phrog_3366	NA	unknown function
UHGV-0204851_41	eggNOG-mapper	476272.RUMHYD_01779	NA	NA
UHGV-0204851_41	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0204851_42	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0204851_42	UniRef90	UniRef90_UPI000E4989EB	minor capsid protein	NA
UHGV-0204851_42	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-0204851_42	Structural annotation	PF11114	NA	NA
UHGV-0204851_43	PHROG	phrog_3266	tail completion	connector
UHGV-0204851_43	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-0204851_43	Structural annotation	PF12691	NA	NA
UHGV-0204851_44	PHROG	phrog_3099	NA	unknown function
UHGV-0204851_44	eggNOG-mapper	1449050.JNLE01000003_gene3884	NA	NA
UHGV-0204851_44	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0204851_45	PHROG	phrog_11299	NA	unknown function
UHGV-0204851_45	eggNOG-mapper	33035.JPJF01000106_gene3125	NA	NA
UHGV-0204851_45	Structural annotation	PF10666	NA	NA
UHGV-0204851_46	PHROG	phrog_706	NA	unknown function
UHGV-0204851_46	UniRef90	UniRef90_A0A173TZF2	Bacteriophage Gp15 protein	NA
UHGV-0204851_46	eggNOG-mapper	411459.RUMOBE_01383	Bacteriophage Gp15 protein	NA
UHGV-0204851_46	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0204851_46	Structural annotation	PF06854	NA	NA
UHGV-0204851_47	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0204851_47	UniRef90	UniRef90_A0A1C5N853	Phage-related protein	NA
UHGV-0204851_47	eggNOG-mapper	411902.CLOBOL_00126	NA	NA
UHGV-0204851_47	COG	COG5283	Phage-related tail protein	NA
UHGV-0204851_48	PHROG	phrog_1194	NA	unknown function
UHGV-0204851_48	eggNOG-mapper	416870.llmg_0845	NA	NA
UHGV-0204851_48	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0204851_49	PHROG	phrog_6616	tail protein	tail
UHGV-0204851_49	UniRef90	UniRef90_A0A3D3U8S7	Peptidase S74 domain-containing protein	NA
UHGV-0204851_49	eggNOG-mapper	33035.JPJF01000043_gene1002	NA	NA
UHGV-0204851_49	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0204851_51	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0204851_52	KOfam	K22708	tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]	NA
UHGV-0204851_52	UniRef90	UniRef90_A0A3C1DDJ5	Glyco_trans_2-like domain-containing protein	NA
UHGV-0204851_52	eggNOG-mapper	891391.LAC30SC_09350	transferase activity, transferring glycosyl groups	NA
UHGV-0204851_52	Pfam	PF00535	Glycosyl transferase family 2	Glycos_transf_2
UHGV-0204851_52	COG	COG1215	Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase	NA
UHGV-0204851_52	Structural annotation	PF13641, MF_01164, NF007482, COG1215	NA	NA
UHGV-0204851_53	PHROG	phrog_240	head protein	head and packaging
UHGV-0204851_53	eggNOG-mapper	1430331.EP10_10445	Belongs to the glycosyl hydrolase 8 (cellulase D) family	NA
UHGV-0204851_53	COG	COG3405	Endo-1,4-beta-D-glucanase Y	NA
UHGV-0204851_55	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0204851_55	PHROG	phrog_435	endolysin	lysis
UHGV-0204851_55	UniRef90	UniRef90_A0A373BKV9	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204851_55	eggNOG-mapper	411490.ANACAC_00597	Cell wall hydrolase autolysin	NA
UHGV-0204851_55	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0204851_55	Pfam	PF05036	SPOR domain	SPOR
UHGV-0204851_55	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204851_55	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0204851_57	eggNOG-mapper	742740.HMPREF9474_00056	NA	NA
UHGV-0204851_57	Structural annotation	PF12167, PF13392	NA	NA
UHGV-0204851_58	Pfam	PF08681	NA	DUF1778
UHGV-0204851_59	KOfam	K14059	int; integrase	NA
UHGV-0204851_59	PHROG	phrog_1	integrase	integration and excision
UHGV-0204851_59	UniRef90	UniRef90_A0A1C6K4B6	Tyrosine recombinase XerD	NA
UHGV-0204851_59	eggNOG-mapper	742740.HMPREF9474_03478	DNA integration	NA
UHGV-0204851_59	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204851_59	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0204851_59	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0204851_60	KOfam	K19370	DNAJC22; DnaJ homolog subfamily C member 22	NA
UHGV-0204851_60	PHROG	phrog_10292	NA	unknown function
UHGV-0204851_60	UniRef90	UniRef90_A0A7C6NR26	TM2 domain-containing protein	NA
UHGV-0204851_60	eggNOG-mapper	556261.HMPREF0240_02202	TM2 domain	NA
UHGV-0204851_60	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0204851_60	Pfam	PF05154	TM2 domain	TM2
UHGV-0204851_60	COG	COG2314	NA	NA
UHGV-0204851_62	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0204851_62	UniRef90	UniRef90_UPI001D029144	transcriptional regulator	NA
UHGV-0204851_62	eggNOG-mapper	457412.RSAG_00795	sequence-specific DNA binding	NA
UHGV-0204851_62	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204851_62	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204851_62	Structural annotation	PF01381, NF007257, COG3655	NA	NA
UHGV-0204851_63	UniRef90	UniRef90_A0A2N5PI32	NA	NA
UHGV-0204851_63	eggNOG-mapper	411470.RUMGNA_03231	NA	NA
UHGV-0204851_63	Pfam	PF05339	NA	DUF739
UHGV-0204851_63	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0204851_63	Structural annotation	PF05339, MF_00535, NF002773, COG3655	NA	NA
UHGV-0204851_64	Structural annotation	COG1321	NA	NA
UHGV-0204851_69	PHROG	phrog_7024	NA	unknown function
UHGV-0204851_69	eggNOG-mapper	1487921.DP68_11255	NA	NA
UHGV-0204851_71	eggNOG-mapper	596152.DesU5LDRAFT_1910	NA	NA
UHGV-0204851_71	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-0204851_76	PHROG	phrog_659	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0204851_76	UniRef90	UniRef90_A0A352BM23	NA	NA
UHGV-0204851_76	eggNOG-mapper	33035.JPJF01000135_gene5082	NA	NA
UHGV-0204851_76	Pfam	PF06378	NA	DUF1071
UHGV-0204851_76	Structural annotation	PF06378, TIGR00607, COG5055	NA	NA
UHGV-0204851_77	PHROG	phrog_398	NA	unknown function
UHGV-0204851_77	UniRef90	UniRef90_UPI00068C968F	putative HNHc nuclease	NA
UHGV-0204851_77	eggNOG-mapper	33035.JPJF01000122_gene2462	Putative HNHc nuclease	NA
UHGV-0204851_77	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0204851_77	Structural annotation	PF16784	NA	NA
UHGV-0204851_79	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0204851_79	eggNOG-mapper	33035.JPJF01000122_gene2460	NA	NA
UHGV-0204851_79	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0204851_80	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0204851_80	UniRef90	UniRef90_A0A416KCJ7	Phg_2220_C domain-containing protein	NA
UHGV-0204851_80	eggNOG-mapper	397291.C804_01603	DnaD domain protein	NA
UHGV-0204851_80	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0204851_80	Structural annotation	PF10771, MF_01177, TIGR01714, COG0640	NA	NA
UHGV-0204851_82	PHROG	phrog_5070	NA	unknown function
UHGV-0204851_82	UniRef90	UniRef90_A0A085HIF4	Gp229 family phage protein (Fragment)	NA
UHGV-0204851_82	eggNOG-mapper	411470.RUMGNA_02189	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0204851_82	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-0204851_82	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204851	Yes	46,133 bps	45.06%	100.00%	0.9800
UHGV-0178017	No	46,841 bps	44.99%	99.90%	0.9803
UHGV-0182161	No	46,219 bps	45.06%	99.90%	0.9787