vOTU-047887

Overview

vOTU representative UHGV-0205064

No. of genomes 10

Genome length 36,036 bps

Completeness 100.00% (complete)

Host Merdisoma sp900066385

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047887
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-01212 › vGENUS-01175 › vSUBGEN-12878 › vOTU-047887
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Merdisoma › Merdisoma sp900066385
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205064
BioSample	NA
Genome length	36,036 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	62
CDS density	91.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205064_1	eggNOG-mapper	742735.HMPREF9467_00844	NA	NA
UHGV-0205064_2	PHROG	phrog_20593	NA	unknown function
UHGV-0205064_4	PHROG	phrog_419	NA	unknown function
UHGV-0205064_4	UniRef90	UniRef90_A0A4U9RIR3	NA	NA
UHGV-0205064_4	eggNOG-mapper	476272.RUMHYD_03324	NA	NA
UHGV-0205064_4	Structural annotation	PF14083	NA	NA
UHGV-0205064_6	eggNOG-mapper	1499968.TCA2_4415	NA	NA
UHGV-0205064_6	Structural annotation	PF12286	NA	NA
UHGV-0205064_7	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-0205064_7	UniRef90	UniRef90_UPI001D097859	radical SAM protein	NA
UHGV-0205064_7	eggNOG-mapper	478749.BRYFOR_07592	NA	NA
UHGV-0205064_7	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-0205064_7	Structural annotation	MF_01865, NF010916, COG0621	NA	NA
UHGV-0205064_8	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0205064_8	UniRef90	UniRef90_UPI001BBBA8BA	NA	NA
UHGV-0205064_8	eggNOG-mapper	665950.HMPREF1025_01405	NA	NA
UHGV-0205064_8	Pfam	PF14359	NA	DUF4406
UHGV-0205064_8	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0205064_8	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0205064_9	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0205064_9	UniRef90	UniRef90_A0A355KVL2	DNA cytosine methyltransferase	NA
UHGV-0205064_9	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0205064_9	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0205064_9	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0205064_10	KOfam	K19779	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	NA
UHGV-0205064_10	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0205064_10	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0205064_10	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0205064_10	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0205064_11	PHROG	phrog_24386	NA	unknown function
UHGV-0205064_11	eggNOG-mapper	742733.HMPREF9469_05055	phosphatase activity	NA
UHGV-0205064_11	COG	COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	NA
UHGV-0205064_12	PHROG	phrog_21026	NA	unknown function
UHGV-0205064_14	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0205064_14	UniRef90	UniRef90_A0A3R6NEA8	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-0205064_14	eggNOG-mapper	742740.HMPREF9474_04310	NA	NA
UHGV-0205064_14	Structural annotation	PF07374, MF_00674, NF001074	NA	NA
UHGV-0205064_15	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0205064_15	UniRef90	UniRef90_UPI00046706B5	transposase	NA
UHGV-0205064_15	eggNOG-mapper	742733.HMPREF9469_01828	transposase activity	NA
UHGV-0205064_15	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-0205064_15	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0205064_15	Structural annotation	PF07141	NA	NA
UHGV-0205064_16	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0205064_16	PHROG	phrog_29775	NA	unknown function
UHGV-0205064_16	UniRef90	UniRef90_A0A1C6FVY4	Phage terminase, large subunit, PBSX family	NA
UHGV-0205064_16	eggNOG-mapper	428125.CLOLEP_01804	Phage terminase, large subunit, PBSX family	NA
UHGV-0205064_16	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0205064_16	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0205064_16	COG	COG1783	Phage terminase large subunit	NA
UHGV-0205064_16	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0205064_17	PHROG	phrog_533	portal protein	head and packaging
UHGV-0205064_17	UniRef90	UniRef90_A0A2V2F7J4	Portal protein	NA
UHGV-0205064_17	eggNOG-mapper	428125.CLOLEP_01803	NA	NA
UHGV-0205064_17	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0205064_17	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0205064_17	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0205064_18	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0205064_18	UniRef90	UniRef90_UPI001E5C8078	phage minor capsid protein	NA
UHGV-0205064_18	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0205064_18	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0205064_18	COG	COG2369	NA	NA
UHGV-0205064_18	Structural annotation	PF06152	NA	NA
UHGV-0205064_19	Structural annotation	PF14530, MF_01441, NF009990, COG0783	NA	NA
UHGV-0205064_21	PHROG	phrog_422	major head protein	head and packaging
UHGV-0205064_21	UniRef90	UniRef90_A0A316T938	S-l_SbsC_C domain-containing protein	NA
UHGV-0205064_21	eggNOG-mapper	428125.CLOLEP_00183	COG NOG28280 non supervised orthologous group	NA
UHGV-0205064_21	Structural annotation	PF19821, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0205064_22	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0205064_23	UniRef90	UniRef90_UPI001D06E7F2	minor capsid protein	NA
UHGV-0205064_23	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0205064_24	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0205064_24	UniRef90	UniRef90_UPI001899C432	minor capsid protein	NA
UHGV-0205064_24	eggNOG-mapper	1214217.ALNF01000014_gene1371	Minor capsid protein	NA
UHGV-0205064_24	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0205064_24	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0205064_25	Structural annotation	PF12691	NA	NA
UHGV-0205064_26	PHROG	phrog_820	major tail protein	tail
UHGV-0205064_26	UniRef90	UniRef90_A0A3A6EPU8	S-l_SbsC_C domain-containing protein	NA
UHGV-0205064_26	eggNOG-mapper	428125.CLOLEP_00178	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0205064_26	COG	COG5492	NA	NA
UHGV-0205064_26	Structural annotation	PF06199, PF18316, TIGR02126, COG5437	NA	NA
UHGV-0205064_27	Structural annotation	PF10666	NA	NA
UHGV-0205064_28	PHROG	phrog_706	NA	unknown function
UHGV-0205064_28	UniRef90	UniRef90_UPI000C819E80	Gp15 family bacteriophage protein	NA
UHGV-0205064_28	eggNOG-mapper	1449343.JQLQ01000002_gene1325	Bacteriophage Gp15 protein	NA
UHGV-0205064_28	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0205064_28	Structural annotation	PF06854	NA	NA
UHGV-0205064_29	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0205064_29	UniRef90	UniRef90_A0A3A6E908	TMP_3 domain-containing protein	NA
UHGV-0205064_29	eggNOG-mapper	883066.HMPREF9233_00612	tape measure	NA
UHGV-0205064_29	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0205064_29	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0205064_29	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0205064_29	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0205064_30	UniRef90	UniRef90_R6N293	Putative phage tail component domain protein	NA
UHGV-0205064_30	COG	COG4722	Phage-related protein YomH	NA
UHGV-0205064_30	Structural annotation	PF20753, PF20195, TIGR01633, COG4722	NA	NA
UHGV-0205064_31	PHROG	phrog_5555	tail protein	tail
UHGV-0205064_31	UniRef90	UniRef90_UPI00189BED7C	phage tail protein	NA
UHGV-0205064_31	eggNOG-mapper	1391647.AVSV01000039_gene1112	Phage minor structural protein	NA
UHGV-0205064_31	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0205064_31	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0205064_31	COG	COG4926	Phage-related protein	NA
UHGV-0205064_31	Structural annotation	PF06605, TIGR01665, COG4926	NA	NA
UHGV-0205064_32	PHROG	phrog_21765	NA	unknown function
UHGV-0205064_32	UniRef90	UniRef90_A0A1C5W6G3	BppU_N domain-containing protein	NA
UHGV-0205064_32	eggNOG-mapper	476272.RUMHYD_03672	PFAM Collagen triple helix	NA
UHGV-0205064_32	COG	COG2931	Ca2+-binding protein, RTX toxin-related	NA
UHGV-0205064_33	KOfam	K13276	bpr; bacillopeptidase F [EC:3.4.21.-]	NA
UHGV-0205064_33	PHROG	phrog_11157	NA	unknown function
UHGV-0205064_33	UniRef90	UniRef90_UPI00189E1472	Ig-like domain-containing protein	NA
UHGV-0205064_33	eggNOG-mapper	33035.JPJF01000023_gene3227	NA	NA
UHGV-0205064_33	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0205064_33	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0205064_33	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0205064_33	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0205064_34	PHROG	phrog_32322	NA	unknown function
UHGV-0205064_34	UniRef90	UniRef90_A0A1Y4B913	Ig-like_bact domain-containing protein	NA
UHGV-0205064_34	eggNOG-mapper	411461.DORFOR_01183	NA	NA
UHGV-0205064_34	Pfam	PF13754	NA	Big_3_4
UHGV-0205064_34	Structural annotation	PF13754	NA	NA
UHGV-0205064_35	eggNOG-mapper	476272.RUMHYD_02869	NA	NA
UHGV-0205064_35	Structural annotation	PF07703, NF038114, COG5501	NA	NA
UHGV-0205064_38	PHROG	phrog_937	hemolysin	other
UHGV-0205064_38	eggNOG-mapper	742740.HMPREF9474_03172	NA	NA
UHGV-0205064_39	PHROG	phrog_443	holin	lysis
UHGV-0205064_39	UniRef90	UniRef90_UPI001C0212A6	holin	NA
UHGV-0205064_39	eggNOG-mapper	626523.GCWU000342_01012	Putative lactococcus lactis phage r1t holin	NA
UHGV-0205064_39	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0205064_39	Structural annotation	PF16945	NA	NA
UHGV-0205064_40	PHROG	phrog_14030	NA	unknown function
UHGV-0205064_40	UniRef90	UniRef90_A0A417IER1	PG_binding_1 domain-containing protein	NA
UHGV-0205064_40	eggNOG-mapper	1235793.C809_02691	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0205064_40	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0205064_40	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0205064_40	Structural annotation	PF01471, NF038080, COG3409	NA	NA
UHGV-0205064_41	eggNOG-mapper	1304866.K413DRAFT_4686	NA	NA
UHGV-0205064_42	PHROG	phrog_99	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205064_42	eggNOG-mapper	742740.HMPREF9474_00056	NA	NA
UHGV-0205064_42	Pfam	PF00847	AP2 domain	AP2
UHGV-0205064_42	Structural annotation	PF00847, TIGR03826	NA	NA
UHGV-0205064_43	PHROG	phrog_2329	NA	unknown function
UHGV-0205064_43	UniRef90	UniRef90_A0A1C6EQW9	SpoVT-AbrB domain-containing protein	NA
UHGV-0205064_43	eggNOG-mapper	1292035.H476_0264	NA	NA
UHGV-0205064_43	Structural annotation	PF04014, NF007312, COG2336	NA	NA
UHGV-0205064_44	KOfam	K14059	int; integrase	NA
UHGV-0205064_44	PHROG	phrog_1	integrase	integration and excision
UHGV-0205064_44	UniRef90	UniRef90_UPI00164C6C3A	site-specific integrase	NA
UHGV-0205064_44	eggNOG-mapper	1280698.AUJS01000007_gene999	Phage integrase family	NA
UHGV-0205064_44	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205064_44	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0205064_44	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0205064_46	UniRef90	UniRef90_A0A3D5TFB0	HTH cro/C1-type domain-containing protein	NA
UHGV-0205064_46	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205064_46	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205064_48	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0205064_48	UniRef90	UniRef90_A0A416SLU4	XRE family transcriptional regulator	NA
UHGV-0205064_48	eggNOG-mapper	1235798.C817_00620	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0205064_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205064_48	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0205064_48	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0205064_49	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0205064_49	UniRef90	UniRef90_A0A412ELD4	XRE family transcriptional regulator	NA
UHGV-0205064_49	eggNOG-mapper	665950.HMPREF1025_01418	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205064_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205064_49	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205064_49	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205064_51	KOfam	K15773	hipB; HTH-type transcriptional regulator / antitoxin HipB	NA
UHGV-0205064_51	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-0205064_51	UniRef90	UniRef90_A0A1C5PS98	Transcriptional regulator, y4mF family	NA
UHGV-0205064_51	eggNOG-mapper	1033738.CAEP01000159_gene3305	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0205064_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205064_51	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205064_51	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0205064_52	UniRef90	UniRef90_UPI00129DCFE7	HTH domain-containing protein	NA
UHGV-0205064_53	PHROG	phrog_7024	NA	unknown function
UHGV-0205064_54	KOfam	K08309	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	NA
UHGV-0205064_54	PHROG	phrog_19890	NA	unknown function
UHGV-0205064_54	UniRef90	UniRef90_A0A1C6KI68	Invasion protein IagB	NA
UHGV-0205064_54	eggNOG-mapper	1410650.JHWL01000003_gene2854	lytic transglycosylase activity	NA
UHGV-0205064_54	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0205064_54	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0205064_54	Structural annotation	PF01464, MF_01616, NF008670, COG0741	NA	NA
UHGV-0205064_56	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205064_56	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0205064_56	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0205064_56	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-0205064_57	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0205064_57	eggNOG-mapper	411468.CLOSCI_00314	NA	NA
UHGV-0205064_57	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0205064_58	PHROG	phrog_7566	NA	unknown function
UHGV-0205064_58	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-0205064_58	eggNOG-mapper	1007096.BAGW01000031_gene114	NA	NA
UHGV-0205064_60	PHROG	phrog_1163	NA	unknown function
UHGV-0205064_60	UniRef90	UniRef90_UPI0018CE184B	NA	NA
UHGV-0205064_60	eggNOG-mapper	33035.JPJF01000122_gene2459	NA	NA
UHGV-0205064_60	Pfam	PF19808	NA	DUF6291
UHGV-0205064_60	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-0205064_60	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-0205064_60	Structural annotation	PF19808	NA	NA
UHGV-0205064_61	Structural annotation	PF06257, MF_00754, TIGR02728, COG4466	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205064	Yes	36,036 bps	50.21%	100.00%	0.9802
UHGV-0083033	No	35,598 bps	50.63%	99.90%	0.9802
UHGV-1462915	No	35,546 bps	50.61%	99.90%	0.9803
UHGV-0892016	No	26,324 bps	51.39%	78.63%	0.9823
UHGV-1496160	No	25,622 bps	51.30%	76.53%	0.9821
UHGV-1349575	No	19,854 bps	49.78%	59.32%	0.9792
UHGV-0483832	No	17,002 bps	49.71%	50.80%	0.9807
UHGV-1816035	No	15,306 bps	52.93%	44.69%	0.9816
UHGV-1809515	No	13,705 bps	53.13%	39.98%	0.9829
UHGV-1652954	No	11,016 bps	52.74%	32.53%	0.9823