vOTU-047891

Overview

vOTU representative UHGV-0205093

No. of genomes 7

Genome length 56,731 bps

Completeness 100.00% (complete)

Host Agathobacter rectalis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047891
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 › vSUBFAM-00048 › vGENUS-00024 › vSUBGEN-35408 › vOTU-047891
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Agathobacter › Agathobacter rectalis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205093
BioSample	SAMN00032708
Genome length	56,731 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	102
CDS density	85.97%
tRNA count	5
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205093_1	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0205093_1	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205093_1	UniRef90	UniRef90_A0A412RQV0	AAA_23 domain-containing protein	NA
UHGV-0205093_1	eggNOG-mapper	397290.C810_01461	nuclear chromosome segregation	NA
UHGV-0205093_1	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0205093_1	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0205093_5	PHROG	phrog_10056	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0205093_5	UniRef90	UniRef90_A0A412RR22	Phage recombination protein Bet	NA
UHGV-0205093_5	eggNOG-mapper	397290.C810_01467	Phage recombination protein Bet	NA
UHGV-0205093_5	Pfam	PF03837	RecT family	RecT
UHGV-0205093_5	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-0205093_5	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0205093_5	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0205093_6	PHROG	phrog_25456	NA	unknown function
UHGV-0205093_7	UniRef90	UniRef90_A0A412RQP5	PAPS_reduct domain-containing protein	NA
UHGV-0205093_7	eggNOG-mapper	1151292.QEW_4547	NA	NA
UHGV-0205093_7	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0205093_7	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0205093_7	Structural annotation	PF01507, NF002537, COG0175	NA	NA
UHGV-0205093_8	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0205093_8	UniRef90	UniRef90_A0A412RQR2	PAPS_reduct domain-containing protein	NA
UHGV-0205093_8	eggNOG-mapper	1280696.ATVY01000096_gene1971	NA	NA
UHGV-0205093_8	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0205093_8	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0205093_8	Structural annotation	PF01507, MF_00064, TIGR02055, COG0175	NA	NA
UHGV-0205093_9	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0205093_9	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0205093_9	UniRef90	UniRef90_A0A412RQX2	MBL fold metallo-hydrolase	NA
UHGV-0205093_9	eggNOG-mapper	397290.C810_01486	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-0205093_9	Pfam	PF00753	Metallo-beta-lactamase superfamily	Lactamase_B
UHGV-0205093_9	dbAPIS	APIS058	NA	NA
UHGV-0205093_9	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0205093_9	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0205093_13	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0205093_13	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205093_13	UniRef90	UniRef90_A0A412RR48	Single-stranded DNA-binding protein	NA
UHGV-0205093_13	eggNOG-mapper	397290.C810_01495	Single-strand binding protein family	NA
UHGV-0205093_13	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0205093_13	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0205093_13	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0205093_13	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0205093_13	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0205093_15	PHROG	phrog_20593	NA	unknown function
UHGV-0205093_16	PHROG	phrog_19106	NA	unknown function
UHGV-0205093_16	UniRef90	UniRef90_A0A412RQV5	GIY-YIG nuclease family protein	NA
UHGV-0205093_16	eggNOG-mapper	658655.HMPREF0988_00875	NA	NA
UHGV-0205093_16	Structural annotation	TIGR01453	NA	NA
UHGV-0205093_17	PHROG	phrog_6724	NA	unknown function
UHGV-0205093_17	eggNOG-mapper	1463936.JOJI01000043_gene7935	NA	NA
UHGV-0205093_18	Structural annotation	PF17388	NA	NA
UHGV-0205093_19	PHROG	phrog_5708	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0205093_19	UniRef90	UniRef90_UPI001BB8B78A	Phage replication initiation protein	NA
UHGV-0205093_19	eggNOG-mapper	1415774.U728_867	DnaD domain protein	NA
UHGV-0205093_19	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0205093_19	Structural annotation	PF09681, TIGR01714	NA	NA
UHGV-0205093_20	eggNOG-mapper	397291.C804_00971	NA	NA
UHGV-0205093_20	Structural annotation	NF007260	NA	NA
UHGV-0205093_21	PHROG	phrog_9804	NA	unknown function
UHGV-0205093_21	UniRef90	UniRef90_A0A412RQW3	Inhibitor_G39P domain-containing protein	NA
UHGV-0205093_21	eggNOG-mapper	1410650.JHWL01000003_gene2847	Loader and inhibitor of phage G40P	NA
UHGV-0205093_21	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0205093_21	Structural annotation	PF11417	NA	NA
UHGV-0205093_25	Structural annotation	COG4446	NA	NA
UHGV-0205093_30	eggNOG-mapper	658655.HMPREF0988_00884	NA	NA
UHGV-0205093_31	eggNOG-mapper	658655.HMPREF0988_00884	NA	NA
UHGV-0205093_31	AcrCatalog	cluster_47493	NA	NA
UHGV-0205093_32	Structural annotation	PF09889, MF_00649	NA	NA
UHGV-0205093_34	PHROG	phrog_16129	excisionase	integration and excision
UHGV-0205093_34	UniRef90	UniRef90_A0A412RR26	HTH luxR-type domain-containing protein	NA
UHGV-0205093_34	eggNOG-mapper	411489.CLOL250_01459	Excisionase from transposon Tn916	NA
UHGV-0205093_34	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-0205093_34	Pfam	PF09035	Excisionase from transposon Tn916	Tn916-Xis
UHGV-0205093_34	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0205093_34	Structural annotation	PF09035, PF00196, MF_00674, NF033787, NF008895, COG2771	NA	NA
UHGV-0205093_35	KOfam	K14059	int; integrase	NA
UHGV-0205093_35	PHROG	phrog_1	integrase	integration and excision
UHGV-0205093_35	UniRef90	UniRef90_A0A412RQS9	Site-specific integrase	NA
UHGV-0205093_35	eggNOG-mapper	1235799.C818_02711	Phage integrase family	NA
UHGV-0205093_35	Pfam	PF02920	DNA binding domain of tn916 integrase	Integrase_DNA
UHGV-0205093_35	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0205093_35	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205093_35	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0205093_35	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0205093_37	PHROG	phrog_21718	NA	unknown function
UHGV-0205093_37	eggNOG-mapper	658655.HMPREF0988_00919	NA	NA
UHGV-0205093_37	Structural annotation	NF033819	NA	NA
UHGV-0205093_39	PHROG	phrog_16490	NA	unknown function
UHGV-0205093_39	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0205093_40	PHROG	phrog_20016	NA	unknown function
UHGV-0205093_40	UniRef90	UniRef90_A0A2Z4QB67	Carbohydrate binding domain/collagen triple helix repeat protein	NA
UHGV-0205093_40	eggNOG-mapper	1235790.C805_00062	NA	NA
UHGV-0205093_40	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0205093_41	eggNOG-mapper	658655.HMPREF0988_00915	NA	NA
UHGV-0205093_42	PHROG	phrog_1233	NA	unknown function
UHGV-0205093_42	eggNOG-mapper	658655.HMPREF0988_00914	NA	NA
UHGV-0205093_50	UniRef90	UniRef90_A0A8D9UIS5	DNA-packaging protein	NA
UHGV-0205093_50	eggNOG-mapper	658655.HMPREF0988_00895	NA	NA
UHGV-0205093_50	Structural annotation	PF16677	NA	NA
UHGV-0205093_51	PHROG	phrog_236	nucleotide kinase	other
UHGV-0205093_51	UniRef90	UniRef90_A0A412RQV8	NA	NA
UHGV-0205093_51	eggNOG-mapper	1200557.JHWV01000001_gene285	NA	NA
UHGV-0205093_51	Pfam	PF11753	NA	DUF3310
UHGV-0205093_51	Structural annotation	PF11753	NA	NA
UHGV-0205093_53	PHROG	phrog_4707	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0205093_53	eggNOG-mapper	1122172.KB890259_gene1441	NA	NA
UHGV-0205093_53	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0205093_53	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0205093_53	Structural annotation	NF040939, COG3355	NA	NA
UHGV-0205093_54	UniRef90	UniRef90_A0A8D9PGW1	HTH psq-type domain-containing protein	NA
UHGV-0205093_54	Structural annotation	PF05225, COG2886	NA	NA
UHGV-0205093_57	UniRef90	UniRef90_A0A8D9PGN8	Acetyl-coA carboxylase zinc finger domain protein	NA
UHGV-0205093_64	PHROG	phrog_2316	NA	unknown function
UHGV-0205093_64	UniRef90	UniRef90_A0A3E4YBW5	NA	NA
UHGV-0205093_64	eggNOG-mapper	1280676.AUJO01000024_gene3262	NA	NA
UHGV-0205093_64	Structural annotation	PF16475, MF_00436, NF033216	NA	NA
UHGV-0205093_65	UniRef90	UniRef90_UPI0011072322	NA	NA
UHGV-0205093_65	eggNOG-mapper	1256908.HMPREF0373_00479	NA	NA
UHGV-0205093_65	Structural annotation	PF14359, COG3613	NA	NA
UHGV-0205093_66	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0205093_66	UniRef90	UniRef90_A0A318EQM2	Putative phage terminase large subunit-like protein	NA
UHGV-0205093_66	eggNOG-mapper	1123263.AUKY01000015_gene1608	chromosome segregation	NA
UHGV-0205093_66	COG	COG5410	NA	NA
UHGV-0205093_66	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0205093_67	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0205093_67	eggNOG-mapper	397290.C810_01391	NA	NA
UHGV-0205093_67	Structural annotation	PF02996	NA	NA
UHGV-0205093_68	PHROG	phrog_64	portal protein	head and packaging
UHGV-0205093_68	UniRef90	UniRef90_A0A412RQZ0	Phage portal protein	NA
UHGV-0205093_68	eggNOG-mapper	1232453.BAIF02000058_gene1625	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0205093_68	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0205093_68	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0205093_69	PHROG	phrog_2662	portal protein	head and packaging
UHGV-0205093_69	UniRef90	UniRef90_A0A412RR50	Phage_Mu_F domain-containing protein	NA
UHGV-0205093_69	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0205093_69	COG	COG2369	NA	NA
UHGV-0205093_69	Structural annotation	PF04233, TIGR01641	NA	NA
UHGV-0205093_71	PHROG	phrog_909	major head protein	head and packaging
UHGV-0205093_71	UniRef90	UniRef90_R7BGI8	Phage major capsid protein	NA
UHGV-0205093_72	PHROG	phrog_29	major head protein	head and packaging
UHGV-0205093_72	UniRef90	UniRef90_A0A412RQU1	Major capsid protein	NA
UHGV-0205093_72	eggNOG-mapper	1118054.CAGW01000102_gene4700	Phage major capsid protein E	NA
UHGV-0205093_72	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0205093_72	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0205093_73	UniRef90	UniRef90_A0A8D9UIY7	Rho termination factor	NA
UHGV-0205093_73	Structural annotation	PF21169	NA	NA
UHGV-0205093_74	eggNOG-mapper	397290.C810_01402	NA	NA
UHGV-0205093_75	PHROG	phrog_4105	NA	unknown function
UHGV-0205093_75	eggNOG-mapper	411459.RUMOBE_00911	NA	NA
UHGV-0205093_76	PHROG	phrog_1129	holin	lysis
UHGV-0205093_76	UniRef90	UniRef90_A0A412RR82	Enolase	NA
UHGV-0205093_76	eggNOG-mapper	411461.DORFOR_00721	NA	NA
UHGV-0205093_76	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0205093_76	Structural annotation	PF06946	NA	NA
UHGV-0205093_77	eggNOG-mapper	1298920.KI911353_gene2656	NA	NA
UHGV-0205093_77	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0205093_78	eggNOG-mapper	1232453.BAIF02000058_gene1631	NA	NA
UHGV-0205093_78	AcrCatalog	cluster_24841	NA	NA
UHGV-0205093_79	Structural annotation	PF05657	NA	NA
UHGV-0205093_80	UniRef90	UniRef90_R7BGF5	Phage tail protein	NA
UHGV-0205093_80	Structural annotation	PF16463, TIGR02126, COG5437	NA	NA
UHGV-0205093_83	KOfam	K07273	acm; lysozyme	NA
UHGV-0205093_83	PHROG	phrog_291	endolysin	lysis
UHGV-0205093_83	UniRef90	UniRef90_A0A174GRH8	Autolytic lysozyme	NA
UHGV-0205093_83	eggNOG-mapper	1235800.C819_00458	Glycosyl hydrolases family 25	NA
UHGV-0205093_83	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0205093_83	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0205093_83	Structural annotation	PF01183, PF01471, MF_01672, COG3757, COG3409	NA	NA
UHGV-0205093_84	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0205093_84	eggNOG-mapper	397288.C806_03052	domain protein	NA
UHGV-0205093_84	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0205093_85	PHROG	phrog_1194	NA	unknown function
UHGV-0205093_85	eggNOG-mapper	997830.HMPREF1124_0608	NA	NA
UHGV-0205093_85	Pfam	PF20458	NA	DUF6711
UHGV-0205093_85	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0205093_86	PHROG	phrog_6616	tail protein	tail
UHGV-0205093_86	UniRef90	UniRef90_A0A412RR71	Tail fiber domain-containing protein	NA
UHGV-0205093_86	eggNOG-mapper	476272.RUMHYD_01992	NA	NA
UHGV-0205093_86	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0205093_86	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0205093_87	eggNOG-mapper	476272.RUMHYD_01994	NA	NA
UHGV-0205093_87	Pfam	PF11839	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
UHGV-0205093_88	PHROG	phrog_5302	tail protein	tail
UHGV-0205093_88	UniRef90	UniRef90_A0A345BPB9	Lectin	NA
UHGV-0205093_88	eggNOG-mapper	665956.HMPREF1032_00690	NA	NA
UHGV-0205093_88	Structural annotation	COG1262	NA	NA
UHGV-0205093_89	PHROG	phrog_20201	NA	unknown function
UHGV-0205093_90	UniRef90	UniRef90_A0A349YRM6	XkdX family protein	NA
UHGV-0205093_90	eggNOG-mapper	411468.CLOSCI_01507	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-0205093_90	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-0205093_90	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0205093_94	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0205093_94	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0205093_94	UniRef90	UniRef90_A0A412RR31	Helix-turn-helix domain-containing protein	NA
UHGV-0205093_94	eggNOG-mapper	1304866.K413DRAFT_0834	PFAM helix-turn-helix domain protein	NA
UHGV-0205093_94	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205093_94	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0205093_94	Structural annotation	PF12844, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205093_95	UniRef90	UniRef90_A0A412RQX5	XRE family transcriptional regulator	NA
UHGV-0205093_95	eggNOG-mapper	1232449.BAHV02000016_gene1846	Peptidase S24-like	NA
UHGV-0205093_95	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205093_95	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0205093_95	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0205093_96	PHROG	phrog_32192	NA	unknown function
UHGV-0205093_96	UniRef90	UniRef90_UPI001D0221FF	alanine-zipper protein	NA
UHGV-0205093_97	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0205093_97	UniRef90	UniRef90_UPI001C012A29	helix-turn-helix domain-containing protein	NA
UHGV-0205093_97	eggNOG-mapper	1304866.K413DRAFT_0834	PFAM helix-turn-helix domain protein	NA
UHGV-0205093_97	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0205093_97	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0205093_97	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0205093_98	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0205093_98	UniRef90	UniRef90_A0A412RQX1	Phage repressor protein	NA
UHGV-0205093_98	eggNOG-mapper	1304866.K413DRAFT_1188	AntA/AntB antirepressor	NA
UHGV-0205093_98	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0205093_98	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0205093_98	COG	COG3617	Prophage antirepressor	NA
UHGV-0205093_98	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-0205093_100	UniRef90	UniRef90_A0A1L8RDA1	LysM domain-containing protein	NA
UHGV-0205093_100	eggNOG-mapper	742765.HMPREF9457_03017	peptidase	NA
UHGV-0205093_100	COG	COG4942	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205093	Yes	56,731 bps	38.77%	100.00%	0.9796
UHGV-1959199	No	59,493 bps	39.02%	99.90%	0.9805
UHGV-1435574	No	51,408 bps	38.68%	87.12%	0.9808
UHGV-1407985	No	49,583 bps	38.89%	84.02%	0.9812
UHGV-1930960	No	42,805 bps	39.11%	72.53%	0.9821
UHGV-2211110	No	25,759 bps	39.92%	43.66%	0.9831
UHGV-2225746	No	20,221 bps	37.86%	34.25%	0.9782