vOTU-047907

Overview

vOTU representative UHGV-0205192

No. of genomes 3

Genome length 40,149 bps

Completeness 100.00% (complete)

Host Oscillospirales

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047907
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-01336 › vGENUS-01727 › vSUBGEN-11039 › vOTU-047907
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales
Host range breadth	Order
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205192
BioSample	SAMN00042371
Genome length	40,149 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	67
CDS density	94.85%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205192_1	PHROG	phrog_8680	NA	unknown function
UHGV-0205192_1	UniRef90	UniRef90_UPI00189ACAD3	NA	NA
UHGV-0205192_1	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-0205192_1	Pfam	PF14386	NA	DUF4417
UHGV-0205192_1	Structural annotation	PF14386	NA	NA
UHGV-0205192_3	UniRef90	UniRef90_U2R3C0	Nascent polypeptide-associated complex domain protein	NA
UHGV-0205192_3	eggNOG-mapper	1226322.HMPREF1545_00042	NA	NA
UHGV-0205192_3	Structural annotation	PF13542	NA	NA
UHGV-0205192_4	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0205192_4	PHROG	phrog_10250	NA	unknown function
UHGV-0205192_4	UniRef90	UniRef90_A0A3D3Y0N9	PBSX family phage terminase large subunit	NA
UHGV-0205192_4	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-0205192_4	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0205192_4	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0205192_4	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0205192_4	COG	COG1783	Phage terminase large subunit	NA
UHGV-0205192_4	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0205192_5	PHROG	phrog_64	portal protein	head and packaging
UHGV-0205192_5	UniRef90	UniRef90_A0A856HZB4	Phage portal protein	NA
UHGV-0205192_5	eggNOG-mapper	1256908.HMPREF0373_00485	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0205192_5	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0205192_5	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0205192_6	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0205192_6	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-0205192_6	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0205192_6	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0205192_6	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-0205192_6	COG	COG2369	NA	NA
UHGV-0205192_6	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0205192_7	PHROG	phrog_1865	NA	unknown function
UHGV-0205192_7	Structural annotation	PF07073, MF_00436, NF037951, COG4568	NA	NA
UHGV-0205192_8	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0205192_8	UniRef90	UniRef90_UPI0018AA0B5A	HK97 gp10 family phage protein	NA
UHGV-0205192_8	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0205192_8	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0205192_8	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0205192_8	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0205192_9	Structural annotation	PF18152	NA	NA
UHGV-0205192_10	Structural annotation	PF06810	NA	NA
UHGV-0205192_11	PHROG	phrog_544	major head protein	head and packaging
UHGV-0205192_11	UniRef90	UniRef90_A0A810PZM2	S-l_SbsC_C domain-containing protein	NA
UHGV-0205192_11	eggNOG-mapper	1347392.CCEZ01000005_gene1236	NA	NA
UHGV-0205192_11	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0205192_13	PHROG	phrog_17977	NA	unknown function
UHGV-0205192_13	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0205192_13	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0205192_14	PHROG	phrog_17405	head protein	head and packaging
UHGV-0205192_14	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-0205192_14	Structural annotation	PF11367	NA	NA
UHGV-0205192_15	PHROG	phrog_885	major tail protein	tail
UHGV-0205192_15	UniRef90	UniRef90_UPI000BE41A82	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA
UHGV-0205192_15	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0205192_15	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0205192_16	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-0205192_18	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0205192_18	eggNOG-mapper	1499683.CCFF01000017_gene2565	tape measure	NA
UHGV-0205192_18	COG	COG1511	NA	NA
UHGV-0205192_19	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0205192_20	PHROG	phrog_13879	NA	unknown function
UHGV-0205192_20	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-0205192_20	Structural annotation	PF14594, PF06588, NF033848, COG4379, COG5156	NA	NA
UHGV-0205192_21	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0205192_21	Structural annotation	PF00354	NA	NA
UHGV-0205192_22	eggNOG-mapper	1226322.HMPREF1545_02881	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0205192_22	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0205192_24	UniRef90	UniRef90_A0A8J6JAX9	XkdX family protein	NA
UHGV-0205192_24	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0205192_25	PHROG	phrog_37604	NA	unknown function
UHGV-0205192_25	eggNOG-mapper	1232443.BAIA02000078_gene10	NA	NA
UHGV-0205192_26	PHROG	phrog_1129	holin	lysis
UHGV-0205192_26	UniRef90	UniRef90_A0A8J6J3M3	Phage holin family protein	NA
UHGV-0205192_26	eggNOG-mapper	1007096.BAGW01000036_gene2663	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0205192_26	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0205192_26	Structural annotation	PF06946	NA	NA
UHGV-0205192_28	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0205192_28	PHROG	phrog_435	endolysin	lysis
UHGV-0205192_28	UniRef90	UniRef90_A0A1G8HCT6	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0205192_28	eggNOG-mapper	1410668.JNKC01000001_gene1675	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0205192_28	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0205192_28	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-0205192_28	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0205192_28	Structural annotation	PF01520, PF09992, PF01471, MF_00562, TIGR02883, COG0860, COG4632, COG3409	NA	NA
UHGV-0205192_29	UniRef90	UniRef90_U2R3E6	KORA domain-containing protein	NA
UHGV-0205192_29	Structural annotation	PF16509, MF_00674, NF008895, COG2739	NA	NA
UHGV-0205192_31	PHROG	phrog_3754	NA	unknown function
UHGV-0205192_31	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0205192_32	PHROG	phrog_21718	NA	unknown function
UHGV-0205192_32	UniRef90	UniRef90_A0A285PT36	Consensus disorder prediction	NA
UHGV-0205192_32	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0205192_33	PHROG	phrog_22984	NA	unknown function
UHGV-0205192_34	PHROG	phrog_16490	NA	unknown function
UHGV-0205192_34	eggNOG-mapper	658655.HMPREF0988_00917	NA	NA
UHGV-0205192_35	PHROG	phrog_20016	NA	unknown function
UHGV-0205192_35	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0205192_35	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0205192_35	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0205192_36	eggNOG-mapper	476272.RUMHYD_01772	NA	NA
UHGV-0205192_37	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0205192_38	KOfam	K14059	int; integrase	NA
UHGV-0205192_38	PHROG	phrog_1	integrase	integration and excision
UHGV-0205192_38	UniRef90	UniRef90_UPI0018A8CCD8	site-specific integrase	NA
UHGV-0205192_38	eggNOG-mapper	1321814.HMPREF9089_00905	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0205192_38	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0205192_38	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205192_38	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0205192_38	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0205192_39	KOfam	K01174	nuc; micrococcal nuclease [EC:3.1.31.1]	NA
UHGV-0205192_39	PHROG	phrog_20876	nuclease	DNA, RNA and nucleotide metabolism
UHGV-0205192_39	UniRef90	UniRef90_A0A140L9P1	Thermonuclease	NA
UHGV-0205192_39	eggNOG-mapper	1089548.KI783301_gene2029	Staphylococcal nuclease homologues	NA
UHGV-0205192_39	PADLOC	shah_acc_0212	SNc+LTD	CRISPR-CAS
UHGV-0205192_39	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-0205192_39	Pfam	PF00565	Staphylococcal nuclease homologue	SNase
UHGV-0205192_39	COG	COG1525	Endonuclease YncB, thermonuclease family	NA
UHGV-0205192_40	PHROG	phrog_87	metallo-protease	other
UHGV-0205192_40	UniRef90	UniRef90_A0A1C5P6H3	Metallopeptidase immA	NA
UHGV-0205192_40	eggNOG-mapper	1294142.CINTURNW_1002	IrrE N-terminal-like domain	NA
UHGV-0205192_40	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0205192_40	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0205192_40	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0205192_41	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0205192_41	UniRef90	UniRef90_A0A174FRM3	Helix-turn-helix domain	NA
UHGV-0205192_41	eggNOG-mapper	294382.Q5YAA4_9CAUD	sequence-specific DNA binding	NA
UHGV-0205192_41	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205192_42	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0205192_42	UniRef90	UniRef90_A0A412EXN2	XRE family transcriptional regulator	NA
UHGV-0205192_42	eggNOG-mapper	394503.Ccel_3076	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0205192_42	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0205192_42	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205192_42	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0205192_44	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0205192_44	UniRef90	UniRef90_UPI0019672DEA	helix-turn-helix domain-containing protein	NA
UHGV-0205192_44	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0205192_44	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0205192_45	Structural annotation	PF12728, NF040990, COG3311	NA	NA
UHGV-0205192_47	Structural annotation	PF13560	NA	NA
UHGV-0205192_50	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0205192_50	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205192_50	UniRef90	UniRef90_UPI001959E3D8	AAA family ATPase	NA
UHGV-0205192_50	eggNOG-mapper	1203606.HMPREF1526_00309	nuclear chromosome segregation	NA
UHGV-0205192_50	Pfam	PF13476	AAA domain	AAA_23
UHGV-0205192_50	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0205192_50	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0205192_51	PHROG	phrog_862	NA	unknown function
UHGV-0205192_51	eggNOG-mapper	1203606.HMPREF1526_00310	NA	NA
UHGV-0205192_51	Structural annotation	PF05037, COG2965	NA	NA
UHGV-0205192_52	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0205192_52	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0205192_52	UniRef90	UniRef90_UPI00195A5026	MBL fold metallo-hydrolase	NA
UHGV-0205192_52	eggNOG-mapper	1203606.HMPREF1526_00311	Metallo-beta-lactamase superfamily	NA
UHGV-0205192_52	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0205192_52	dbAPIS	APIS058	NA	NA
UHGV-0205192_52	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0205192_52	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0205192_53	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0205192_53	UniRef90	UniRef90_R6MCS9	NA	NA
UHGV-0205192_53	eggNOG-mapper	1203606.HMPREF1526_01889	replication terminator protein, phage associated	NA
UHGV-0205192_54	PHROG	phrog_1029	NA	unknown function
UHGV-0205192_54	eggNOG-mapper	552398.HMPREF0866_01625	NA	NA
UHGV-0205192_54	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0205192_55	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0205192_55	UniRef90	UniRef90_A0A1C6D5S6	NA	NA
UHGV-0205192_55	eggNOG-mapper	1235790.C805_00030	NA	NA
UHGV-0205192_55	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0205192_55	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0205192_56	Structural annotation	PF11417	NA	NA
UHGV-0205192_58	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0205192_58	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0205192_58	UniRef90	UniRef90_H1CIV2	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0205192_58	eggNOG-mapper	1121334.KB911073_gene1852	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0205192_58	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0205192_58	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0205192_58	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0205192_58	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0205192_59	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-0205192_59	UniRef90	UniRef90_A0A6L5TFB3	Radical SAM protein	NA
UHGV-0205192_59	eggNOG-mapper	1235800.C819_00846	NA	NA
UHGV-0205192_59	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-0205192_59	Structural annotation	MF_01864, NF010916, COG2516	NA	NA
UHGV-0205192_61	PHROG	phrog_22389	NA	unknown function
UHGV-0205192_64	eggNOG-mapper	216594.MMAR_1994	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	NA
UHGV-0205192_64	COG	COG1327	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	NA
UHGV-0205192_66	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0205192_66	UniRef90	UniRef90_A0A096DGF2	HTH cro/C1-type domain-containing protein	NA
UHGV-0205192_66	eggNOG-mapper	742738.HMPREF9460_00887	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205192_66	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205192_66	Structural annotation	PF01381, NF041951, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205192	Yes	40,149 bps	56.21%	100.00%	0.9796
UHGV-1390931	No	40,466 bps	56.28%	99.90%	0.9799
UHGV-0921740	No	21,525 bps	56.03%	53.65%	0.9778