vOTU-047955

Overview

vOTU representative UHGV-0205581

No. of genomes 3

Genome length 51,862 bps

Completeness 100.00% (complete)

Host Clostridium AQ innocuum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047955
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00262 › vSUBFAM-03007 › vGENUS-12817 › vSUBGEN-19908 › vOTU-047955
Host taxonomy	Bacteria › Firmicutes › Bacilli › Erysipelotrichales › Erysipelotrichaceae › Clostridium AQ › Clostridium AQ innocuum
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0205581
BioSample	SAMN11031376
Genome length	51,862 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	75
CDS density	88.02%
tRNA count	3
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205581_1	eggNOG-mapper	1423775.BAMN01000014_gene788	NA	NA
UHGV-0205581_3	PHROG	phrog_989	NA	unknown function
UHGV-0205581_3	UniRef90	UniRef90_UPI001E5628F7	MarR family transcriptional regulator	NA
UHGV-0205581_3	eggNOG-mapper	428125.CLOLEP_03223	NA	NA
UHGV-0205581_4	PHROG	phrog_21057	NA	unknown function
UHGV-0205581_4	eggNOG-mapper	1027292.HMPREF9372_1279	NA	NA
UHGV-0205581_4	Structural annotation	PF13451	NA	NA
UHGV-0205581_5	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0205581_5	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0205581_5	UniRef90	UniRef90_A0A223MJW9	Toxin Bro	NA
UHGV-0205581_5	eggNOG-mapper	552396.HMPREF0863_00756	P22_AR N-terminal domain	NA
UHGV-0205581_5	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-0205581_5	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0205581_5	Structural annotation	PF08346, TIGR02681, COG3561	NA	NA
UHGV-0205581_6	UniRef90	UniRef90_A0A223MJG5	Transcriptional regulator	NA
UHGV-0205581_6	eggNOG-mapper	1504823.CCMM01000008_gene1079	sequence-specific DNA binding	NA
UHGV-0205581_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205581_6	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205581_6	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0205581_7	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0205581_7	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0205581_7	UniRef90	UniRef90_A0A223MJ37	HTH cro/C1-type domain-containing protein	NA
UHGV-0205581_7	eggNOG-mapper	1111454.HMPREF1250_0782	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205581_7	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0205581_7	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0205581_7	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0205581_7	Structural annotation	PF00717, PF01381, MF_00015, MF_00535, TIGR00498, NF041951, COG1974	NA	NA
UHGV-0205581_8	KOfam	K14059	int; integrase	NA
UHGV-0205581_8	PHROG	phrog_1	integrase	integration and excision
UHGV-0205581_8	UniRef90	UniRef90_A0A223MJ99	Tyr recombinase domain-containing protein	NA
UHGV-0205581_8	eggNOG-mapper	1460635.JCM19038_3434	Phage integrase family	NA
UHGV-0205581_8	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205581_8	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0205581_8	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-0205581_11	eggNOG-mapper	1211844.CBLM010000025_gene2164	NA	NA
UHGV-0205581_14	UniRef90	UniRef90_A0A1C7HSY4	CHAP domain-containing protein	NA
UHGV-0205581_14	eggNOG-mapper	658659.HMPREF0983_03290	lysozyme activity	NA
UHGV-0205581_14	Pfam	PF05257	CHAP domain	CHAP
UHGV-0205581_14	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0205581_14	Structural annotation	PF00877, TIGR02594, COG3942	NA	NA
UHGV-0205581_15	PHROG	phrog_1863	NA	unknown function
UHGV-0205581_15	eggNOG-mapper	1232449.BAHV02000017_gene1511	NA	NA
UHGV-0205581_17	PHROG	phrog_16267	NA	unknown function
UHGV-0205581_17	UniRef90	UniRef90_UPI0006C02713	tail fiber domain-containing protein	NA
UHGV-0205581_17	eggNOG-mapper	552396.HMPREF0863_01647	Phage minor structural protein	NA
UHGV-0205581_17	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0205581_17	COG	COG4926	Phage-related protein	NA
UHGV-0205581_17	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0205581_18	PHROG	phrog_1401	NA	unknown function
UHGV-0205581_18	Structural annotation	PF07761	NA	NA
UHGV-0205581_20	PHROG	phrog_1194	NA	unknown function
UHGV-0205581_20	eggNOG-mapper	1232453.BAIF02000058_gene1638	NA	NA
UHGV-0205581_20	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0205581_21	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0205581_21	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0205581_21	UniRef90	UniRef90_A8RD17	Cation diffusion facilitator family transporter	NA
UHGV-0205581_21	eggNOG-mapper	428127.EUBDOL_01563	homoserine transmembrane transporter activity	NA
UHGV-0205581_21	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-0205581_22	PHROG	phrog_3845	NA	unknown function
UHGV-0205581_22	eggNOG-mapper	552396.HMPREF0863_04116	NA	NA
UHGV-0205581_22	Pfam	PF17032	zinc-ribbon family	zinc_ribbon_15
UHGV-0205581_25	Structural annotation	PF16463, PF17892, MF_04116, TIGR02241, NF012211, COG5437	NA	NA
UHGV-0205581_26	Structural annotation	PF08873, COG5003	NA	NA
UHGV-0205581_27	eggNOG-mapper	1235800.C819_00481	NA	NA
UHGV-0205581_27	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0205581_29	Structural annotation	PF19586, TIGR01563, COG5614	NA	NA
UHGV-0205581_30	UniRef90	UniRef90_A0A7C7ERG0	DNA-packaging protein	NA
UHGV-0205581_32	PHROG	phrog_29	major head protein	head and packaging
UHGV-0205581_32	UniRef90	UniRef90_UPI000CDB6260	major capsid protein	NA
UHGV-0205581_32	eggNOG-mapper	476272.RUMHYD_01946	Phage major capsid protein E	NA
UHGV-0205581_32	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0205581_32	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0205581_33	PHROG	phrog_909	major head protein	head and packaging
UHGV-0205581_33	eggNOG-mapper	476272.RUMHYD_01945	NA	NA
UHGV-0205581_34	UniRef90	UniRef90_UPI000E41BB01	NA	NA
UHGV-0205581_34	eggNOG-mapper	1232453.BAIF02000058_gene1626	NA	NA
UHGV-0205581_34	Structural annotation	PF14265	NA	NA
UHGV-0205581_35	PHROG	phrog_64	portal protein	head and packaging
UHGV-0205581_35	UniRef90	UniRef90_A0A374HKE8	Phage portal protein	NA
UHGV-0205581_35	eggNOG-mapper	1121866.AUGK01000003_gene1429	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0205581_35	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0205581_35	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0205581_37	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0205581_37	UniRef90	UniRef90_UPI001D063AE7	phage terminase large subunit	NA
UHGV-0205581_37	eggNOG-mapper	476272.RUMHYD_01940	TIGRFAM Phage	NA
UHGV-0205581_37	COG	COG5410	NA	NA
UHGV-0205581_37	Structural annotation	PF17289, PF04466, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0205581_38	PHROG	phrog_419	NA	unknown function
UHGV-0205581_38	UniRef90	UniRef90_A0A060QMU0	NA	NA
UHGV-0205581_38	eggNOG-mapper	1123312.KB904569_gene346	NA	NA
UHGV-0205581_40	UniRef90	UniRef90_UPI001D07B715	DNA-packaging protein	NA
UHGV-0205581_40	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0205581_40	COG	COG5484	NA	NA
UHGV-0205581_43	Pfam	PF20323	NA	DUF6618
UHGV-0205581_43	Structural annotation	PF20323	NA	NA
UHGV-0205581_44	Structural annotation	PF21485, MF_00085, NF003076, COG0231	NA	NA
UHGV-0205581_45	PHROG	phrog_19458	primase	DNA, RNA and nucleotide metabolism
UHGV-0205581_45	UniRef90	UniRef90_A0A7X5DCK0	LPD15 domain-containing protein	NA
UHGV-0205581_45	eggNOG-mapper	411459.RUMOBE_01108	NA	NA
UHGV-0205581_45	COG	COG4227	Antirestriction protein ArdC	NA
UHGV-0205581_46	Structural annotation	PF08281, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0205581_48	PHROG	phrog_12834	NA	unknown function
UHGV-0205581_48	eggNOG-mapper	1123013.AUIC01000006_gene1279	NA	NA
UHGV-0205581_48	Structural annotation	PF07065, MF_00047, NF004085, COG1181	NA	NA
UHGV-0205581_49	Structural annotation	PF04319, TIGR00686	NA	NA
UHGV-0205581_51	UniRef90	UniRef90_A0A223MTW1	NA	NA
UHGV-0205581_51	Pfam	PF04448	NA	DUF551
UHGV-0205581_51	Structural annotation	PF04448, NF041588	NA	NA
UHGV-0205581_53	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0205581_53	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205581_53	UniRef90	UniRef90_A0A099I4V0	Single-stranded DNA-binding protein	NA
UHGV-0205581_53	eggNOG-mapper	658659.HMPREF0983_02345	Single-stranded DNA-binding protein	NA
UHGV-0205581_53	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0205581_53	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0205581_53	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0205581_53	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0205581_53	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0205581_54	PHROG	phrog_98	NA	unknown function
UHGV-0205581_54	UniRef90	UniRef90_A0A223MTV0	YopX domain-containing protein	NA
UHGV-0205581_54	eggNOG-mapper	1499683.CCFF01000017_gene2588	YopX protein	NA
UHGV-0205581_54	Pfam	PF09643	YopX protein	YopX
UHGV-0205581_54	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0205581_54	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0205581_56	KOfam	K07317	K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0205581_56	PHROG	phrog_799	DNA methyltransferase	other
UHGV-0205581_56	UniRef90	UniRef90_A0A175AAH1	SAM-dependent methyltransferase	NA
UHGV-0205581_56	eggNOG-mapper	1144275.COCOR_07683	rRNA (adenine-N6,N6-)-dimethyltransferase activity	NA
UHGV-0205581_56	PADLOC	MTase_II_00044	Type II methyltransferase	RM
UHGV-0205581_56	Pfam	PF05175	Methyltransferase small domain	MTS
UHGV-0205581_56	COG	COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	NA
UHGV-0205581_56	Structural annotation	PF02384, MF_01872, NF012220, COG0286	NA	NA
UHGV-0205581_59	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0205581_59	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0205581_59	UniRef90	UniRef90_A0A223MJF7	DNA helicase	NA
UHGV-0205581_59	eggNOG-mapper	1232449.BAHV02000016_gene1835	Participates in initiation and elongation during chromosome replication	NA
UHGV-0205581_59	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0205581_59	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0205581_59	COG	COG0305	Replicative DNA helicase	NA
UHGV-0205581_59	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0205581_60	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0205581_60	UniRef90	UniRef90_UPI001CE32ADC	helix-turn-helix domain-containing protein	NA
UHGV-0205581_60	eggNOG-mapper	1122173.AXVL01000001_gene1649	NA	NA
UHGV-0205581_60	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0205581_60	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0205581_60	Structural annotation	PF02334, MF_01909, NF040939, COG1675	NA	NA
UHGV-0205581_61	eggNOG-mapper	1336234.JAGN01000004_gene538	NA	NA
UHGV-0205581_64	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0205581_64	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0205581_64	UniRef90	UniRef90_A0A7G9GLS4	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0205581_64	eggNOG-mapper	411459.RUMOBE_01038	COG COG4570 Holliday junction resolvase	NA
UHGV-0205581_64	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0205581_64	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0205581_64	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0205581_65	PHROG	phrog_1029	NA	unknown function
UHGV-0205581_65	eggNOG-mapper	1232449.BAHV02000016_gene1838	NA	NA
UHGV-0205581_65	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0205581_66	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0205581_66	UniRef90	UniRef90_UPI001C0ED106	replication terminator protein	NA
UHGV-0205581_66	eggNOG-mapper	1486428.A0A097BY30_9CAUD	NA	NA
UHGV-0205581_68	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0205581_68	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0205581_68	UniRef90	UniRef90_A0A223MJW4	Lactamase_B domain-containing protein	NA
UHGV-0205581_68	eggNOG-mapper	537013.CLOSTMETH_01716	Metallo-beta-lactamase superfamily	NA
UHGV-0205581_68	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0205581_68	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0205581_68	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0205581_69	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0205581_69	PHROG	phrog_2185	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0205581_69	UniRef90	UniRef90_UPI000F797C57	recombinase RecT	NA
UHGV-0205581_69	eggNOG-mapper	1336234.JAGN01000004_gene545	NA	NA
UHGV-0205581_69	Structural annotation	NF007351, COG3723	NA	NA
UHGV-0205581_70	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0205581_70	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205581_70	UniRef90	UniRef90_A0A6N7S5U7	AAA family ATPase	NA
UHGV-0205581_70	eggNOG-mapper	666686.B1NLA3E_01100	nuclear chromosome segregation	NA
UHGV-0205581_70	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0205581_70	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205581	Yes	51,862 bps	37.55%	100.00%	0.9735
UHGV-1598792	No	25,809 bps	38.32%	46.85%	0.9742
UHGV-0048578	No	24,066 bps	38.72%	43.62%	0.9746