vOTU-047964

Overview

vOTU representative UHGV-0205629

No. of genomes 2

Genome length 35,374 bps

Completeness 100.00% (complete)

Host CAG-508

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047964
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 › vSUBFAM-00887 › vGENUS-14353 › vSUBGEN-23989 › vOTU-047964
Host taxonomy	Bacteria › Firmicutes A › Clostridia › TANB77 › CAG-508
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205629
BioSample	SAMN11893704
Genome length	35,374 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	56
CDS density	93.95%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205629_1	eggNOG-mapper	1200567.JNKD01000011_gene654	sigma factor activity	NA
UHGV-0205629_1	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0205629_1	Structural annotation	PF04545, MF_00962, TIGR02984, COG1191	NA	NA
UHGV-0205629_5	Structural annotation	PF09871, TIGR00739	NA	NA
UHGV-0205629_8	KOfam	K18959	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	NA
UHGV-0205629_8	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0205629_8	UniRef90	UniRef90_R7FBH8	Helicase C-terminal domain-containing protein	NA
UHGV-0205629_8	eggNOG-mapper	1449050.JNLE01000003_gene3908	Type III restriction protein res subunit	NA
UHGV-0205629_8	PADLOC	mREase_IV_00004	Type IV methyl-directed restriction enzyme	RM
UHGV-0205629_8	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0205629_8	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0205629_8	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0205629_8	Structural annotation	PF04851, PF16203, MF_01489, TIGR00603, COG1061	NA	NA
UHGV-0205629_9	eggNOG-mapper	1449050.JNLE01000003_gene3909	Recombination protein U	NA
UHGV-0205629_9	Structural annotation	PF03838, MF_01490, NF040854, COG1591	NA	NA
UHGV-0205629_12	PHROG	phrog_8841	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-0205629_12	UniRef90	UniRef90_UPI0006936C9D	NA	NA
UHGV-0205629_12	eggNOG-mapper	903814.ELI_3221	NA	NA
UHGV-0205629_12	Pfam	PF06048	NA	DUF927
UHGV-0205629_12	Pfam	PF18662	Cch helix turn helix domain	HTH_56
UHGV-0205629_12	COG	COG5519	NA	NA
UHGV-0205629_12	Structural annotation	PF06048, PF18662, MF_00016, NF011296, COG5519	NA	NA
UHGV-0205629_13	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-0205629_13	PHROG	phrog_11992	NA	unknown function
UHGV-0205629_13	UniRef90	UniRef90_R7F6U7	DNA primase (Bacterial type)	NA
UHGV-0205629_13	eggNOG-mapper	180332.JTGN01000007_gene3543	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	NA
UHGV-0205629_13	PADLOC	drt-cluster192	DRT	DRT
UHGV-0205629_13	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-0205629_13	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-0205629_13	Structural annotation	PF01807	NA	NA
UHGV-0205629_14	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205629_14	UniRef90	UniRef90_A0A4P6YX48	HNH endonuclease	NA
UHGV-0205629_14	eggNOG-mapper	945021.TEH_18310	NUMOD4 motif	NA
UHGV-0205629_14	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0205629_14	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0205629_14	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0205629_14	Structural annotation	PF07463	NA	NA
UHGV-0205629_15	PHROG	phrog_18107	NA	unknown function
UHGV-0205629_15	UniRef90	UniRef90_R7F806	PF05037 family protein	NA
UHGV-0205629_15	eggNOG-mapper	1232453.BAIF02000010_gene3338	NA	NA
UHGV-0205629_15	Pfam	PF05037	NA	DUF669
UHGV-0205629_15	Structural annotation	PF05037	NA	NA
UHGV-0205629_16	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0205629_16	UniRef90	UniRef90_UPI0013D1CBB8	AAA family ATPase	NA
UHGV-0205629_16	eggNOG-mapper	1345695.CLSA_c30180	AAA domain	NA
UHGV-0205629_16	Pfam	PF13479	AAA domain	AAA_24
UHGV-0205629_16	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0205629_19	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0205629_19	UniRef90	UniRef90_UPI00051BDF29	siphovirus Gp157 family protein	NA
UHGV-0205629_19	eggNOG-mapper	397290.C810_05162	Siphovirus Gp157	NA
UHGV-0205629_19	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0205629_19	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0205629_22	UniRef90	UniRef90_R7F8M8	LysM domain-containing protein	NA
UHGV-0205629_22	eggNOG-mapper	720554.Clocl_1747	Lysin motif	NA
UHGV-0205629_22	Pfam	PF01476	LysM domain	LysM
UHGV-0205629_22	COG	COG1388	LysM repeat	NA
UHGV-0205629_22	Structural annotation	PF01476, MF_02014, NF010723, COG1388	NA	NA
UHGV-0205629_23	PHROG	phrog_6058	NA	unknown function
UHGV-0205629_23	UniRef90	UniRef90_A0A7X9GS36	Helix-turn-helix domain-containing protein	NA
UHGV-0205629_23	eggNOG-mapper	1238184.CM001792_gene70	NA	NA
UHGV-0205629_23	Structural annotation	PF12728, NF033787	NA	NA
UHGV-0205629_24	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205629_24	UniRef90	UniRef90_UPI001959A293	HNH endonuclease	NA
UHGV-0205629_24	eggNOG-mapper	1283338.Q4Z9A7_BPTWO	sequence-specific DNA binding transcription factor activity	NA
UHGV-0205629_24	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0205629_24	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0205629_25	UniRef90	UniRef90_A0A3D1PJT4	HTH cro/C1-type domain-containing protein	NA
UHGV-0205629_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205629_25	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0205629_25	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0205629_26	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0205629_26	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0205629_26	UniRef90	UniRef90_R6H5R4	LexA repressor	NA
UHGV-0205629_26	eggNOG-mapper	394503.Ccel_3317	Peptidase S24-like	NA
UHGV-0205629_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205629_26	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0205629_26	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205629_26	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, NF010465, COG1974, COG1476	NA	NA
UHGV-0205629_27	PHROG	phrog_10226	NA	unknown function
UHGV-0205629_27	eggNOG-mapper	1121091.AUMP01000069_gene1397	Restriction endonuclease	NA
UHGV-0205629_27	COG	COG1715	Restriction endonuclease Mrr	NA
UHGV-0205629_28	PHROG	phrog_10226	NA	unknown function
UHGV-0205629_28	eggNOG-mapper	1347369.CCAD010000077_gene2877	Restriction endonuclease	NA
UHGV-0205629_28	COG	COG1715	Restriction endonuclease Mrr	NA
UHGV-0205629_30	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0205629_30	PHROG	phrog_1	integrase	integration and excision
UHGV-0205629_30	UniRef90	UniRef90_A0A1Q6L7V2	Tyr recombinase domain-containing protein	NA
UHGV-0205629_30	eggNOG-mapper	1462527.CCDM010000010_gene473	Phage integrase family	NA
UHGV-0205629_30	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205629_30	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0205629_30	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0205629_31	PHROG	phrog_1281	NA	unknown function
UHGV-0205629_31	UniRef90	UniRef90_R5N7Q9	NA	NA
UHGV-0205629_31	eggNOG-mapper	875454.BAEW01000002_gene485	NA	NA
UHGV-0205629_31	Pfam	PF13274	Antitoxin SocA-like, Panacea domain	SocA_Panacea
UHGV-0205629_31	COG	COG3600	NA	NA
UHGV-0205629_31	Structural annotation	PF13274, COG3600	NA	NA
UHGV-0205629_33	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0205629_33	PHROG	phrog_7767	metallo-endopeptidase	other
UHGV-0205629_33	UniRef90	UniRef90_UPI000A593315	M23 family metallopeptidase	NA
UHGV-0205629_33	eggNOG-mapper	285535.JOEY01000005_gene7939	Peptidase family M23	NA
UHGV-0205629_33	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0205629_33	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0205629_33	Structural annotation	PF01551, PF08239, NF040883, COG0739, COG4991	NA	NA
UHGV-0205629_34	PHROG	phrog_199	holin	lysis
UHGV-0205629_34	UniRef90	UniRef90_A0A843HL15	Phage holin family protein	NA
UHGV-0205629_34	eggNOG-mapper	877414.ATWA01000062_gene1614	Bacteriophage holin family	NA
UHGV-0205629_34	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0205629_34	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0205629_34	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0205629_35	PHROG	phrog_24267	NA	unknown function
UHGV-0205629_35	UniRef90	UniRef90_A0A0K9NII1	Putative prophage LambdaSa04, minor structural protein	NA
UHGV-0205629_35	eggNOG-mapper	1123302.KB904167_gene530	the current gene model (or a revised gene model) may contain a frame shift	NA
UHGV-0205629_35	COG	COG4675	Phage tail collar domain	NA
UHGV-0205629_38	Structural annotation	PF14594, MF_01370, NF033848, COG4379	NA	NA
UHGV-0205629_39	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0205629_39	eggNOG-mapper	536233.CLO_1577	tape measure	NA
UHGV-0205629_39	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0205629_39	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-0205629_40	eggNOG-mapper	411461.DORFOR_00736	NA	NA
UHGV-0205629_40	Structural annotation	PF10122, COG4416	NA	NA
UHGV-0205629_41	PHROG	phrog_10934	NA	unknown function
UHGV-0205629_41	eggNOG-mapper	883114.HMPREF9709_01227	NA	NA
UHGV-0205629_42	PHROG	phrog_706	NA	unknown function
UHGV-0205629_42	UniRef90	UniRef90_UPI001F1BBF0E	bacteriophage Gp15 family protein	NA
UHGV-0205629_42	eggNOG-mapper	1499683.CCFF01000017_gene2567	Bacteriophage Gp15 protein	NA
UHGV-0205629_42	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0205629_42	Structural annotation	PF06854	NA	NA
UHGV-0205629_43	PHROG	phrog_4450	NA	unknown function
UHGV-0205629_43	Pfam	PF20378	NA	DUF6673
UHGV-0205629_43	Structural annotation	PF20378	NA	NA
UHGV-0205629_44	PHROG	phrog_3099	NA	unknown function
UHGV-0205629_44	eggNOG-mapper	428127.EUBDOL_01218	NA	NA
UHGV-0205629_44	Structural annotation	PF13715, PF08813, TIGR02126, TIGR04134, COG5437	NA	NA
UHGV-0205629_45	PHROG	phrog_3266	tail completion	connector
UHGV-0205629_45	UniRef90	UniRef90_UPI001570657D	chloramphenicol resistance protein	NA
UHGV-0205629_45	eggNOG-mapper	411470.RUMGNA_02223	NA	NA
UHGV-0205629_45	Structural annotation	PF12691	NA	NA
UHGV-0205629_46	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0205629_46	UniRef90	UniRef90_A0A1M7NJ72	Minor capsid protein	NA
UHGV-0205629_46	eggNOG-mapper	642492.Clole_0824	Minor capsid protein	NA
UHGV-0205629_46	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0205629_46	Structural annotation	PF11114	NA	NA
UHGV-0205629_47	PHROG	phrog_3366	NA	unknown function
UHGV-0205629_47	Pfam	PF20536	NA	DUF6751
UHGV-0205629_47	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0205629_48	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0205629_48	eggNOG-mapper	536233.CLO_0887	NA	NA
UHGV-0205629_49	PHROG	phrog_283	major head protein	head and packaging
UHGV-0205629_49	UniRef90	UniRef90_A0A173REC9	p22 coat protein-gene protein 5	NA
UHGV-0205629_49	eggNOG-mapper	411461.DORFOR_01167	P22 coat protein - gene protein 5	NA
UHGV-0205629_49	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-0205629_49	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0205629_50	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0205629_50	UniRef90	UniRef90_R6XV28	Phage minor structural protein GP20	NA
UHGV-0205629_50	eggNOG-mapper	458233.MCCL_0964	Phage minor structural protein GP20	NA
UHGV-0205629_50	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0205629_50	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-0205629_51	PHROG	phrog_34144	NA	unknown function
UHGV-0205629_51	UniRef90	UniRef90_R6AQU3	Conserved protein	NA
UHGV-0205629_51	eggNOG-mapper	1064535.MELS_1696	NA	NA
UHGV-0205629_51	Structural annotation	PF20111	NA	NA
UHGV-0205629_52	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0205629_52	UniRef90	UniRef90_UPI000C06AD72	polymorphic toxin type 50 domain-containing protein	NA
UHGV-0205629_52	eggNOG-mapper	411473.RUMCAL_01925	NA	NA
UHGV-0205629_52	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0205629_52	COG	COG2369	NA	NA
UHGV-0205629_52	Structural annotation	PF06152	NA	NA
UHGV-0205629_53	PHROG	phrog_533	portal protein	head and packaging
UHGV-0205629_53	UniRef90	UniRef90_F2JPK0	Bacteriophage portal protein, SPP1 Gp6-like protein	NA
UHGV-0205629_53	eggNOG-mapper	642492.Clole_0815	NA	NA
UHGV-0205629_53	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0205629_54	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0205629_54	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-0205629_54	UniRef90	UniRef90_R6XV26	Phage terminase	NA
UHGV-0205629_54	eggNOG-mapper	411461.DORFOR_01162	Phage terminase, large subunit, PBSX family	NA
UHGV-0205629_54	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0205629_54	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0205629_54	COG	COG1783	Phage terminase large subunit	NA
UHGV-0205629_54	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205629	Yes	35,374 bps	27.10%	100.00%	0.9722
UHGV-0044550	No	17,518 bps	28.67%	48.92%	0.9770