vOTU-047992

Overview

vOTU representative UHGV-0205822

No. of genomes 13

Genome length 44,550 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047992
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-00581 › vSUBGEN-26955 › vOTU-047992
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205822
BioSample	NA
Genome length	44,550 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	78
CDS density	90.60%
tRNA count	3
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205822_1	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0205822_1	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0205822_1	UniRef90	UniRef90_UPI001C0FBB84	RNA-directed DNA polymerase	NA
UHGV-0205822_1	eggNOG-mapper	33035.JPJF01000043_gene1000	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-0205822_1	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0205822_1	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0205822_1	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0205822_1	Structural annotation	PF00078, MF_04065, TIGR04416, COG3344	NA	NA
UHGV-0205822_2	eggNOG-mapper	457412.RSAG_04672	NA	NA
UHGV-0205822_3	PHROG	phrog_1382	NA	unknown function
UHGV-0205822_3	eggNOG-mapper	33035.JPJF01000043_gene998	NA	NA
UHGV-0205822_4	KOfam	K07273	acm; lysozyme	NA
UHGV-0205822_4	PHROG	phrog_291	endolysin	lysis
UHGV-0205822_4	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-0205822_4	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-0205822_4	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0205822_4	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0205822_4	Structural annotation	PF01183, TIGR04053, COG3757	NA	NA
UHGV-0205822_6	PHROG	phrog_15303	NA	unknown function
UHGV-0205822_8	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0205822_8	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0205822_8	UniRef90	UniRef90_A0A844D5R9	Phage regulatory protein/antirepressor Ant	NA
UHGV-0205822_8	eggNOG-mapper	947981.E9LUT0_9CAUD	DNA binding	NA
UHGV-0205822_8	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0205822_8	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0205822_8	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0205822_8	Structural annotation	PF09669, PF03374, TIGR02681, COG3646, COG3645	NA	NA
UHGV-0205822_9	Structural annotation	PF07342	NA	NA
UHGV-0205822_10	UniRef90	UniRef90_A0A845R8K0	CopG family transcriptional regulator	NA
UHGV-0205822_10	eggNOG-mapper	663952.SDD27957_09060	NA	NA
UHGV-0205822_10	Pfam	PF01402	Ribbon-helix-helix protein, copG family	RHH_1
UHGV-0205822_10	Structural annotation	PF12651, NF041793, COG4710	NA	NA
UHGV-0205822_11	PHROG	phrog_3754	NA	unknown function
UHGV-0205822_11	UniRef90	UniRef90_A0A7U3NK13	Putative peptidase	NA
UHGV-0205822_11	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-0205822_12	PHROG	phrog_21718	NA	unknown function
UHGV-0205822_12	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0205822_13	PHROG	phrog_22984	NA	unknown function
UHGV-0205822_14	PHROG	phrog_16490	NA	unknown function
UHGV-0205822_14	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0205822_16	PHROG	phrog_20016	NA	unknown function
UHGV-0205822_16	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0205822_16	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0205822_16	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0205822_17	Structural annotation	PF12510	NA	NA
UHGV-0205822_19	KOfam	K14059	int; integrase	NA
UHGV-0205822_19	PHROG	phrog_1	integrase	integration and excision
UHGV-0205822_19	UniRef90	UniRef90_A0A6N7TNQ4	Tyrosine-type recombinase/integrase	NA
UHGV-0205822_19	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-0205822_19	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205822_19	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0205822_19	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0205822_20	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-0205822_20	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0205822_20	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-0205822_23	PHROG	phrog_4980	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-0205822_23	UniRef90	UniRef90_UPI000F643789	Ltp family lipoprotein	NA
UHGV-0205822_23	eggNOG-mapper	1410658.JHWI01000002_gene16	Host cell surface-exposed lipoprotein	NA
UHGV-0205822_23	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0205822_23	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-0205822_23	Structural annotation	PF02631, MF_01114, NF001062, COG2137	NA	NA
UHGV-0205822_26	Structural annotation	PF21715, NF008122, COG1846	NA	NA
UHGV-0205822_27	UniRef90	UniRef90_UPI001C020D87	helix-turn-helix domain-containing protein	NA
UHGV-0205822_27	eggNOG-mapper	411483.FAEPRAA2165_00756	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0205822_27	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205822_27	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0205822_27	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0205822_28	UniRef90	UniRef90_A0A1C7FQD9	Transcriptional regulator	NA
UHGV-0205822_28	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205822_28	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0205822_31	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0205822_31	UniRef90	UniRef90_UPI00156FBCEE	ORF6C domain-containing protein	NA
UHGV-0205822_31	eggNOG-mapper	411490.ANACAC_00813	BRO family, N-terminal domain	NA
UHGV-0205822_31	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0205822_31	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0205822_31	COG	COG3617	Prophage antirepressor	NA
UHGV-0205822_31	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-0205822_32	UniRef90	UniRef90_A0A843GUM6	Membrane lipoprotein lipid attachment site-containing protein	NA
UHGV-0205822_32	eggNOG-mapper	1121865.OMW_01950	NA	NA
UHGV-0205822_32	Structural annotation	PF17516, NF007197	NA	NA
UHGV-0205822_36	Structural annotation	PF10743, NF033787	NA	NA
UHGV-0205822_40	Structural annotation	PF06718	NA	NA
UHGV-0205822_42	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205822_42	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0205822_42	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0205822_42	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-0205822_43	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0205822_43	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205822_43	UniRef90	UniRef90_D4K451	Single-stranded DNA-binding protein	NA
UHGV-0205822_43	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0205822_43	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0205822_43	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0205822_43	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0205822_43	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0205822_43	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0205822_44	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0205822_44	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0205822_44	UniRef90	UniRef90_A0A6N7TLH4	DnaD domain protein	NA
UHGV-0205822_44	eggNOG-mapper	877411.JMMA01000002_gene2292	NA	NA
UHGV-0205822_44	Pfam	PF19808	NA	DUF6291
UHGV-0205822_44	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0205822_44	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0205822_44	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-0205822_45	Structural annotation	PF11417	NA	NA
UHGV-0205822_46	Structural annotation	PF01775, MF_00273, NF001981, COG2157	NA	NA
UHGV-0205822_48	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0205822_48	UniRef90	UniRef90_A0A417JTT5	DNA cytosine methyltransferase	NA
UHGV-0205822_48	eggNOG-mapper	1095750.HMPREF9970_0173	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0205822_48	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0205822_48	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0205822_50	PHROG	phrog_3136	NA	unknown function
UHGV-0205822_50	UniRef90	UniRef90_A0A6N7TMC2	ASCH domain-containing protein	NA
UHGV-0205822_50	eggNOG-mapper	1235793.C809_02645	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0205822_50	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0205822_50	Structural annotation	PF12961, NF008917, COG4933	NA	NA
UHGV-0205822_51	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0205822_51	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0205822_51	UniRef90	UniRef90_A0A6N7TND6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0205822_51	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-0205822_51	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0205822_51	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0205822_51	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0205822_53	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0205822_53	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0205822_54	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0205822_54	UniRef90	UniRef90_UPI001C02EFD1	DNA-packaging protein	NA
UHGV-0205822_54	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-0205822_54	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0205822_54	Structural annotation	PF16677	NA	NA
UHGV-0205822_55	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0205822_55	PHROG	phrog_10250	NA	unknown function
UHGV-0205822_55	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-0205822_55	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-0205822_55	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0205822_55	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0205822_55	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0205822_55	COG	COG1783	Phage terminase large subunit	NA
UHGV-0205822_55	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0205822_56	PHROG	phrog_64	portal protein	head and packaging
UHGV-0205822_56	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-0205822_56	eggNOG-mapper	642492.Clole_2764	phage portal protein, SPP1	NA
UHGV-0205822_56	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0205822_56	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0205822_58	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0205822_58	UniRef90	UniRef90_A0A6N7TLR7	Phage_Mu_F domain-containing protein	NA
UHGV-0205822_58	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0205822_58	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0205822_58	COG	COG2369	NA	NA
UHGV-0205822_58	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0205822_60	PHROG	phrog_8680	NA	unknown function
UHGV-0205822_60	UniRef90	UniRef90_A0A844D688	NA	NA
UHGV-0205822_60	eggNOG-mapper	1423790.BN53_04265	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0205822_60	Pfam	PF14386	NA	DUF4417
UHGV-0205822_60	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0205822_60	Structural annotation	PF14386	NA	NA
UHGV-0205822_62	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0205822_62	UniRef90	UniRef90_A0A6N7TNP6	HK97 gp10 family phage protein	NA
UHGV-0205822_62	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0205822_62	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0205822_62	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0205822_64	Structural annotation	PF06810	NA	NA
UHGV-0205822_65	PHROG	phrog_544	major head protein	head and packaging
UHGV-0205822_65	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-0205822_65	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0205822_65	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0205822_67	PHROG	phrog_17977	NA	unknown function
UHGV-0205822_67	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0205822_68	Structural annotation	PF13554	NA	NA
UHGV-0205822_69	PHROG	phrog_885	major tail protein	tail
UHGV-0205822_69	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0205822_69	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0205822_72	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0205822_72	UniRef90	UniRef90_UPI001C038824	tape measure protein	NA
UHGV-0205822_72	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-0205822_72	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0205822_72	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0205822_72	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0205822_72	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0205822_73	UniRef90	UniRef90_A0A7G9WF98	MtfA protein	NA
UHGV-0205822_73	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-0205822_74	PHROG	phrog_3558	tail protein	tail
UHGV-0205822_74	UniRef90	UniRef90_A0A844DGT5	Prophage_tail domain-containing protein	NA
UHGV-0205822_74	eggNOG-mapper	411460.RUMTOR_00484	Prophage endopeptidase tail	NA
UHGV-0205822_74	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0205822_74	COG	COG4926	Phage-related protein	NA
UHGV-0205822_74	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0205822_75	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0205822_75	UniRef90	UniRef90_UPI001D0EF571	Ig-like domain-containing protein	NA
UHGV-0205822_75	eggNOG-mapper	718252.FP2_14370	domain, Protein	NA
UHGV-0205822_75	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0205822_75	COG	COG5492	NA	NA
UHGV-0205822_76	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-0205822_77	eggNOG-mapper	411483.FAEPRAA2165_00757	NA	NA
UHGV-0205822_77	Structural annotation	PF10651	NA	NA
UHGV-0205822_78	PHROG	phrog_17147	NA	unknown function
UHGV-0205822_78	UniRef90	UniRef90_A0A374JQW7	NA	NA
UHGV-0205822_78	eggNOG-mapper	478749.BRYFOR_08557	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205822	Yes	44,550 bps	54.44%	100.00%	0.9794
UHGV-1108836	No	53,234 bps	53.61%	99.90%	0.9815
UHGV-1352610	No	49,753 bps	53.80%	99.90%	0.9808
UHGV-1170004	No	44,664 bps	54.44%	99.90%	0.9794
UHGV-1162478	No	44,251 bps	54.44%	99.90%	0.9817
UHGV-0931561	No	42,129 bps	54.21%	99.69%	0.9814
UHGV-0912102	No	39,454 bps	54.58%	93.36%	0.9808
UHGV-1450437	No	38,640 bps	54.49%	91.49%	0.9802
UHGV-1814618	No	15,906 bps	55.68%	37.67%	0.9832
UHGV-0132502	No	14,942 bps	55.11%	35.42%	0.9818
UHGV-1814855	No	14,942 bps	55.11%	35.42%	0.9818
UHGV-1764142	No	13,937 bps	55.65%	33.00%	0.9832
UHGV-1939003	No	11,570 bps	54.65%	27.42%	0.9822