vOTU-047996

Overview

vOTU representative UHGV-0205878

No. of genomes 26

Genome length 39,669 bps

Completeness 100.00% (complete)

Host Fusicatenibacter saccharivorans

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047996
Number of genomes	26
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00743 › vGENUS-00607 › vSUBGEN-26951 › vOTU-047996
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Fusicatenibacter › Fusicatenibacter saccharivorans
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205878
BioSample	SAMN00094410
Genome length	39,669 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	55
CDS density	92.05%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205878_2	PHROG	phrog_14030	NA	unknown function
UHGV-0205878_2	UniRef90	UniRef90_A0A174JX56	Spore cortex-lytic enzyme	NA
UHGV-0205878_2	eggNOG-mapper	742741.HMPREF9475_00446	NA	NA
UHGV-0205878_2	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0205878_2	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0205878_2	Structural annotation	PF18013, PF01471, COG3409	NA	NA
UHGV-0205878_4	PHROG	phrog_13890	NA	unknown function
UHGV-0205878_4	UniRef90	UniRef90_A0A1Q9J4Y8	HTH cro/C1-type domain-containing protein	NA
UHGV-0205878_4	eggNOG-mapper	411468.CLOSCI_01452	NA	NA
UHGV-0205878_8	KOfam	K19117	csd1, cas8c; CRISPR-associated protein Csd1	NA
UHGV-0205878_8	UniRef90	UniRef90_UPI001570630B	type I-C CRISPR-associated protein Cas8c/Csd1	NA
UHGV-0205878_8	eggNOG-mapper	469381.Dpep_1072	CRISPR-associated protein (Cas_Csd1)	NA
UHGV-0205878_8	PADLOC	cd09757	CAS-I-C; effector_LS	CRISPR-CAS
UHGV-0205878_8	Pfam	PF09709	CRISPR-associated protein (Cas_Csd1)	Cas_Csd1
UHGV-0205878_8	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0205878_8	Structural annotation	PF09709, TIGR01863	NA	NA
UHGV-0205878_9	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-0205878_9	PHROG	phrog_2104	NA	unknown function
UHGV-0205878_9	UniRef90	UniRef90_A0A373MZ63	Helix-turn-helix domain-containing protein	NA
UHGV-0205878_9	eggNOG-mapper	1280673.AUJJ01000023_gene3124	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205878_9	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0205878_9	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0205878_9	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-0205878_10	Structural annotation	PF00196, NF040595, COG2771	NA	NA
UHGV-0205878_11	KOfam	K14059	int; integrase	NA
UHGV-0205878_11	PHROG	phrog_1	integrase	integration and excision
UHGV-0205878_11	UniRef90	UniRef90_A0A373N009	Site-specific integrase	NA
UHGV-0205878_11	eggNOG-mapper	33035.JPJF01000071_gene4457	Phage integrase family	NA
UHGV-0205878_11	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205878_11	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0205878_11	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0205878_12	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-0205878_12	PHROG	phrog_38135	NA	unknown function
UHGV-0205878_12	UniRef90	UniRef90_A0A416ZS49	NA	NA
UHGV-0205878_12	eggNOG-mapper	1280686.AUKE01000005_gene2337	NA	NA
UHGV-0205878_12	Pfam	PF14020	NA	DUF4236
UHGV-0205878_12	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0205878_12	Structural annotation	PF14020	NA	NA
UHGV-0205878_14	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0205878_14	UniRef90	UniRef90_A0A2T3F6C0	Transcriptional regulator	NA
UHGV-0205878_14	eggNOG-mapper	1280698.AUJS01000007_gene1002	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205878_14	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205878_14	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0205878_16	PHROG	phrog_36464	NA	unknown function
UHGV-0205878_16	eggNOG-mapper	1235798.C817_05488	NA	NA
UHGV-0205878_18	PHROG	phrog_28508	NA	unknown function
UHGV-0205878_18	Structural annotation	PF19005	NA	NA
UHGV-0205878_21	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0205878_21	eggNOG-mapper	1280698.AUJS01000007_gene1013	NA	NA
UHGV-0205878_21	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0205878_22	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0205878_22	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0205878_22	UniRef90	UniRef90_A0A373MZB7	RNase H type-1 domain-containing protein	NA
UHGV-0205878_22	eggNOG-mapper	1268635.Loa_01114	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	NA
UHGV-0205878_22	Pfam	PF00075	RNase H	RNase_H
UHGV-0205878_22	COG	COG0328	Ribonuclease HI	NA
UHGV-0205878_22	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0205878_23	eggNOG-mapper	1235792.C808_00065	NA	NA
UHGV-0205878_24	PHROG	phrog_8470	NA	unknown function
UHGV-0205878_24	UniRef90	UniRef90_UPI001D086F83	PcfJ domain-containing protein	NA
UHGV-0205878_24	eggNOG-mapper	1235792.C808_03081	PcfJ-like protein	NA
UHGV-0205878_24	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0205878_24	Structural annotation	PF14284	NA	NA
UHGV-0205878_25	PHROG	phrog_15077	NA	unknown function
UHGV-0205878_25	UniRef90	UniRef90_A5ZPN2	NA	NA
UHGV-0205878_25	eggNOG-mapper	97139.C824_05986	NA	NA
UHGV-0205878_25	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0205878_26	PHROG	phrog_3502	NA	unknown function
UHGV-0205878_26	UniRef90	UniRef90_A0A373N0F2	Winged helix-turn-helix transcriptional regulator	NA
UHGV-0205878_26	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-0205878_26	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0205878_26	Structural annotation	PF01726, MF_00732, NF041852, COG0640	NA	NA
UHGV-0205878_27	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0205878_27	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205878_27	UniRef90	UniRef90_A0A373N003	Single-stranded DNA-binding protein	NA
UHGV-0205878_27	eggNOG-mapper	1256908.HMPREF0373_03133	Single-stranded DNA-binding protein	NA
UHGV-0205878_27	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0205878_27	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0205878_27	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0205878_27	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0205878_27	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0205878_28	PHROG	phrog_7566	NA	unknown function
UHGV-0205878_28	eggNOG-mapper	411459.RUMOBE_00948	NA	NA
UHGV-0205878_29	Structural annotation	PF02796, NF040595	NA	NA
UHGV-0205878_31	PHROG	phrog_16351	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205878_31	UniRef90	UniRef90_D7GWI5	NA	NA
UHGV-0205878_31	eggNOG-mapper	658655.HMPREF0988_02575	NA	NA
UHGV-0205878_33	Structural annotation	PF10627	NA	NA
UHGV-0205878_34	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0205878_34	UniRef90	UniRef90_A0A373MZQ3	NA	NA
UHGV-0205878_34	eggNOG-mapper	658655.HMPREF0988_02569	sigma factor activity	NA
UHGV-0205878_34	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0205878_34	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0205878_34	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-0205878_35	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0205878_35	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0205878_35	UniRef90	UniRef90_A0A373N028	HNH endonuclease	NA
UHGV-0205878_35	eggNOG-mapper	1232452.BAIB02000007_gene1631	HNH nucleases	NA
UHGV-0205878_35	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0205878_35	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0205878_36	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0205878_36	UniRef90	UniRef90_A0A371IJQ7	RNA polymerase subunit sigma-70	NA
UHGV-0205878_36	eggNOG-mapper	349161.Dred_2608	NA	NA
UHGV-0205878_36	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0205878_36	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0205878_37	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0205878_37	UniRef90	UniRef90_A0A373MZZ0	Terminase large subunit	NA
UHGV-0205878_37	eggNOG-mapper	1232452.BAIB02000007_gene1629	Phage terminase-like protein large subunit	NA
UHGV-0205878_37	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0205878_37	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0205878_37	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0205878_37	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0205878_38	PHROG	phrog_12	portal protein	head and packaging
UHGV-0205878_38	UniRef90	UniRef90_A0A416ZRW1	Phage portal protein	NA
UHGV-0205878_38	eggNOG-mapper	1232452.BAIB02000007_gene1627	Phage portal protein, HK97 family	NA
UHGV-0205878_38	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0205878_38	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0205878_38	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0205878_39	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0205878_39	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0205878_39	UniRef90	UniRef90_A0A416ZS51	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0205878_39	eggNOG-mapper	1235792.C808_00085	Clp protease	NA
UHGV-0205878_39	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0205878_39	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0205878_39	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0205878_40	PHROG	phrog_10	major head protein	head and packaging
UHGV-0205878_40	UniRef90	UniRef90_A0A373N0L7	Phage major capsid protein	NA
UHGV-0205878_40	eggNOG-mapper	1232452.BAIB02000007_gene1625	Phage capsid family	NA
UHGV-0205878_40	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0205878_40	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0205878_40	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0205878_40	Structural annotation	PF05065, TIGR01554, COG4653	NA	NA
UHGV-0205878_41	PHROG	phrog_749	NA	unknown function
UHGV-0205878_42	UniRef90	UniRef90_UPI00189B1559	phage head closure protein	NA
UHGV-0205878_42	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0205878_42	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0205878_43	PHROG	phrog_78	tail terminator	connector
UHGV-0205878_43	Structural annotation	PF05657	NA	NA
UHGV-0205878_44	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0205878_44	UniRef90	UniRef90_D4M595	Phage protein, HK97 gp10 family	NA
UHGV-0205878_44	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-0205878_45	PHROG	phrog_88	major tail protein	tail
UHGV-0205878_45	UniRef90	UniRef90_A0A416ZS16	Phage tail protein	NA
UHGV-0205878_45	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0205878_45	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0205878_47	KOfam	K06675	SMC4; structural maintenance of chromosome 4	NA
UHGV-0205878_47	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0205878_47	UniRef90	UniRef90_A0A373N0I0	Phage tail tape measure protein	NA
UHGV-0205878_47	eggNOG-mapper	742740.HMPREF9474_01203	Phage tail tape measure protein, TP901 family	NA
UHGV-0205878_47	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0205878_47	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0205878_47	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0205878_47	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0205878_48	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0205878_48	UniRef90	UniRef90_A0A844KEE5	Phage tail protein	NA
UHGV-0205878_48	eggNOG-mapper	1232452.BAIB02000007_gene1615	phage tail	NA
UHGV-0205878_48	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0205878_48	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0205878_48	COG	COG4722	Phage-related protein YomH	NA
UHGV-0205878_48	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0205878_49	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0205878_49	UniRef90	UniRef90_A0A373N0D4	Prophage_tail domain-containing protein	NA
UHGV-0205878_49	eggNOG-mapper	33035.JPJF01000023_gene3230	Phage minor structural protein	NA
UHGV-0205878_49	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0205878_49	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0205878_49	COG	COG4926	Phage-related protein	NA
UHGV-0205878_49	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0205878_50	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-0205878_50	PHROG	phrog_14030	NA	unknown function
UHGV-0205878_50	UniRef90	UniRef90_UPI0013140944	phage tail tip lysozyme	NA
UHGV-0205878_50	eggNOG-mapper	33035.JPJF01000093_gene2240	NlpC/P60 family	NA
UHGV-0205878_50	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0205878_50	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0205878_50	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0205878_50	Structural annotation	PF18013, PF05382, NF033742, COG0791	NA	NA
UHGV-0205878_51	PHROG	phrog_24267	NA	unknown function
UHGV-0205878_51	UniRef90	UniRef90_R5HGH3	Phage minor structural protein	NA
UHGV-0205878_51	eggNOG-mapper	526218.Sterm_2930	NA	NA
UHGV-0205878_52	PHROG	phrog_19695	NA	unknown function
UHGV-0205878_52	eggNOG-mapper	411462.DORLON_00772	NA	NA
UHGV-0205878_52	Structural annotation	PF19714	NA	NA
UHGV-0205878_53	PHROG	phrog_2234	tail spike protein	tail
UHGV-0205878_53	UniRef90	UniRef90_UPI000AF21017	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA
UHGV-0205878_53	eggNOG-mapper	1196031.ALEG01000067_gene4794	Right handed beta helix region	NA
UHGV-0205878_53	COG	COG5434	Polygalacturonase	NA
UHGV-0205878_54	KOfam	K03733	xerC; integrase/recombinase XerC	NA
UHGV-0205878_54	PHROG	phrog_1	integrase	integration and excision
UHGV-0205878_54	UniRef90	UniRef90_A0A373N0F6	Integrase	NA
UHGV-0205878_54	eggNOG-mapper	888743.HMPREF9141_2430	Belongs to the 'phage' integrase family	NA
UHGV-0205878_54	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0205878_54	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205878_54	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0205878_54	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0205878_55	PHROG	phrog_199	holin	lysis
UHGV-0205878_55	UniRef90	UniRef90_A0A373MZ88	Holin	NA
UHGV-0205878_55	eggNOG-mapper	411460.RUMTOR_02100	NA	NA
UHGV-0205878_55	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0205878_55	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0205878_55	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205878	Yes	39,669 bps	44.98%	100.00%	0.9792
UHGV-1523746	No	36,088 bps	45.80%	95.54%	0.9810
UHGV-1512169	No	34,762 bps	45.23%	92.03%	0.9821
UHGV-0107170	No	30,415 bps	46.97%	80.52%	0.9820
UHGV-0117833	No	28,895 bps	46.84%	76.49%	0.9813
UHGV-1498810	No	25,571 bps	44.96%	67.69%	0.9816
UHGV-1467762	No	25,542 bps	44.96%	67.62%	0.9817
UHGV-0132350	No	25,479 bps	46.08%	67.45%	0.9810
UHGV-2242563	No	25,008 bps	44.84%	66.20%	0.9823
UHGV-1512802	No	23,063 bps	45.88%	61.06%	0.9820
UHGV-1462446	No	21,240 bps	45.25%	56.23%	0.9815
UHGV-1398184	No	19,091 bps	46.44%	50.54%	0.9827
UHGV-1398185	No	19,091 bps	46.44%	50.54%	0.9828
UHGV-1398187	No	19,091 bps	46.44%	50.54%	0.9827
UHGV-1398188	No	19,091 bps	46.44%	50.54%	0.9827
UHGV-1398189	No	19,091 bps	46.44%	50.54%	0.9827
UHGV-1398190	No	19,091 bps	46.44%	50.54%	0.9827
UHGV-1398191	No	19,091 bps	46.44%	50.54%	0.9828
UHGV-1396722	No	19,067 bps	46.72%	50.48%	0.9821
UHGV-0184760	No	18,380 bps	45.85%	48.66%	0.9812
UHGV-1946640	No	15,000 bps	43.63%	39.71%	0.9792
UHGV-1805900	No	13,487 bps	46.70%	35.70%	0.9833
UHGV-1814425	No	13,487 bps	46.69%	35.70%	0.9827
UHGV-1831048	No	12,019 bps	47.18%	31.82%	0.9833
UHGV-0242025	No	11,038 bps	43.32%	29.22%	0.9805
UHGV-1614617	No	10,364 bps	43.68%	20.77%	0.9757