vOTU-047998

Overview

vOTU representative UHGV-0205910

No. of genomes 3

Genome length 42,192 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047998
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-06416 › vSUBGEN-26956 › vOTU-047998
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0205910
BioSample	SAMN00094479
Genome length	42,192 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	68
CDS density	91.05%
tRNA count	4
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0205910_2	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0205910_2	UniRef90	UniRef90_A0A6N7TNN9	NA	NA
UHGV-0205910_2	eggNOG-mapper	748224.HMPREF9436_01463	NA	NA
UHGV-0205910_2	Pfam	PF07374	NA	DUF1492
UHGV-0205910_2	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-0205910_4	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0205910_4	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0205910_4	UniRef90	UniRef90_A0A6N7TND6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0205910_4	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-0205910_4	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0205910_4	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0205910_4	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0205910_5	PHROG	phrog_3136	NA	unknown function
UHGV-0205910_5	UniRef90	UniRef90_UPI001C02A61B	ASCH domain-containing protein	NA
UHGV-0205910_5	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0205910_5	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0205910_6	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0205910_6	UniRef90	UniRef90_UPI001C00B13F	DNA cytosine methyltransferase	NA
UHGV-0205910_6	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0205910_6	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0205910_6	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0205910_7	Structural annotation	PF11417	NA	NA
UHGV-0205910_8	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0205910_8	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0205910_8	UniRef90	UniRef90_A0A844D5V0	DnaD domain protein	NA
UHGV-0205910_8	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-0205910_8	Pfam	PF19808	NA	DUF6291
UHGV-0205910_8	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0205910_8	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0205910_8	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-0205910_9	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0205910_9	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0205910_9	UniRef90	UniRef90_D4K451	Single-stranded DNA-binding protein	NA
UHGV-0205910_9	eggNOG-mapper	748224.HMPREF9436_00638	Single-stranded DNA-binding protein	NA
UHGV-0205910_9	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0205910_9	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0205910_9	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0205910_9	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0205910_9	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0205910_10	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0205910_10	UniRef90	UniRef90_UPI0011C8A287	recombinase RecT	NA
UHGV-0205910_10	eggNOG-mapper	33035.JPJF01000071_gene4462	NA	NA
UHGV-0205910_10	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0205910_12	Structural annotation	PF14120	NA	NA
UHGV-0205910_14	Structural annotation	PF09537	NA	NA
UHGV-0205910_15	Structural annotation	PF12270, NF040944	NA	NA
UHGV-0205910_16	Structural annotation	PF10743, NF033787	NA	NA
UHGV-0205910_17	PHROG	phrog_4433	NA	unknown function
UHGV-0205910_17	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0205910_18	PHROG	phrog_15946	NA	unknown function
UHGV-0205910_18	eggNOG-mapper	1041147.AUFB01000014_gene330	NA	NA
UHGV-0205910_19	PHROG	phrog_4652	NA	unknown function
UHGV-0205910_19	eggNOG-mapper	397290.C810_01459	NA	NA
UHGV-0205910_19	Structural annotation	TIGR02582, COG1604	NA	NA
UHGV-0205910_20	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0205910_20	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0205910_20	UniRef90	UniRef90_A0A6N7TLD1	Phage antirepressor Ant	NA
UHGV-0205910_20	eggNOG-mapper	394503.Ccel_2852	Phage antirepressor protein	NA
UHGV-0205910_20	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-0205910_20	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0205910_20	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0205910_20	Structural annotation	PF03374, PF08346, TIGR02681, COG3561, COG3645	NA	NA
UHGV-0205910_21	UniRef90	UniRef90_UPI0018995761	helix-turn-helix transcriptional regulator	NA
UHGV-0205910_21	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0205910_22	UniRef90	UniRef90_UPI001C020D87	helix-turn-helix domain-containing protein	NA
UHGV-0205910_22	eggNOG-mapper	1226322.HMPREF1545_00148	Transcriptional	NA
UHGV-0205910_22	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0205910_22	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205910_22	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-0205910_23	Structural annotation	PF21715, NF008122, COG1846	NA	NA
UHGV-0205910_26	PHROG	phrog_888	NA	unknown function
UHGV-0205910_26	UniRef90	UniRef90_A0A6N7TMA2	SHOCT domain-containing protein	NA
UHGV-0205910_26	eggNOG-mapper	1415774.U728_165	Short C-terminal domain	NA
UHGV-0205910_26	Pfam	PF14471	NA	DUF4428
UHGV-0205910_26	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-0205910_26	Structural annotation	PF15947, PF14471	NA	NA
UHGV-0205910_29	KOfam	K15773	hipB; HTH-type transcriptional regulator / antitoxin HipB	NA
UHGV-0205910_29	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-0205910_29	eggNOG-mapper	266265.Bxe_A3948	Helix-turn-helix domain	NA
UHGV-0205910_29	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205910_29	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0205910_29	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-0205910_30	KOfam	K14059	int; integrase	NA
UHGV-0205910_30	PHROG	phrog_1	integrase	integration and excision
UHGV-0205910_30	UniRef90	UniRef90_A0A174D176	Tyrosine recombinase XerD	NA
UHGV-0205910_30	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-0205910_30	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0205910_30	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0205910_30	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0205910_32	Structural annotation	PF12510	NA	NA
UHGV-0205910_33	PHROG	phrog_20016	NA	unknown function
UHGV-0205910_33	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0205910_33	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0205910_33	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0205910_34	PHROG	phrog_16490	NA	unknown function
UHGV-0205910_34	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0205910_35	PHROG	phrog_22984	NA	unknown function
UHGV-0205910_36	PHROG	phrog_21718	NA	unknown function
UHGV-0205910_36	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0205910_37	PHROG	phrog_3754	NA	unknown function
UHGV-0205910_37	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-0205910_39	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0205910_39	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-0205910_39	eggNOG-mapper	944479.JQLX01000018_gene150	Helix-turn-helix XRE-family like proteins	NA
UHGV-0205910_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0205910_39	COG	COG0662	Mannose-6-phosphate isomerase, cupin superfamily	NA
UHGV-0205910_39	Structural annotation	PF01381, TIGR03070, COG1396	NA	NA
UHGV-0205910_42	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-0205910_42	PHROG	phrog_5073	tail fiber protein	tail
UHGV-0205910_42	UniRef90	UniRef90_UPI0018835F0C	collagen-like protein	NA
UHGV-0205910_42	eggNOG-mapper	411483.FAEPRAA2165_00757	NA	NA
UHGV-0205910_42	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0205910_43	PHROG	phrog_15303	NA	unknown function
UHGV-0205910_43	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-0205910_45	KOfam	K07273	acm; lysozyme	NA
UHGV-0205910_45	PHROG	phrog_291	endolysin	lysis
UHGV-0205910_45	UniRef90	UniRef90_E2ZES5	Glycosyl hydrolase family 25	NA
UHGV-0205910_45	eggNOG-mapper	748224.HMPREF9436_00154	hydrolase, family 25	NA
UHGV-0205910_45	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0205910_45	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0205910_45	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0205910_46	PHROG	phrog_1382	NA	unknown function
UHGV-0205910_46	eggNOG-mapper	411468.CLOSCI_00272	NA	NA
UHGV-0205910_48	eggNOG-mapper	748224.HMPREF9436_03323	COG NOG18825 non supervised orthologous group	NA
UHGV-0205910_49	PHROG	phrog_3558	tail protein	tail
UHGV-0205910_49	UniRef90	UniRef90_UPI001C01D15B	phage tail protein	NA
UHGV-0205910_49	eggNOG-mapper	1235799.C818_04233	Prophage endopeptidase tail	NA
UHGV-0205910_49	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0205910_49	COG	COG4926	Phage-related protein	NA
UHGV-0205910_49	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0205910_50	UniRef90	UniRef90_A0A417QGC1	MtfA protein	NA
UHGV-0205910_50	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-0205910_50	COG	COG4722	Phage-related protein YomH	NA
UHGV-0205910_50	Structural annotation	PF05709, PF02408, TIGR01633, COG4722	NA	NA
UHGV-0205910_51	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-0205910_51	UniRef90	UniRef90_A0A6N7TLD3	Tape measure protein	NA
UHGV-0205910_51	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-0205910_51	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0205910_51	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0205910_51	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0205910_51	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0205910_54	PHROG	phrog_885	major tail protein	tail
UHGV-0205910_54	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0205910_54	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0205910_55	Structural annotation	PF13554	NA	NA
UHGV-0205910_56	PHROG	phrog_17977	NA	unknown function
UHGV-0205910_56	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-0205910_56	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0205910_58	PHROG	phrog_544	major head protein	head and packaging
UHGV-0205910_58	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-0205910_58	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0205910_58	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0205910_59	Structural annotation	PF06810	NA	NA
UHGV-0205910_61	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0205910_61	UniRef90	UniRef90_A0A6N7TNP6	HK97 gp10 family phage protein	NA
UHGV-0205910_61	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0205910_61	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0205910_61	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0205910_63	PHROG	phrog_8680	NA	unknown function
UHGV-0205910_63	UniRef90	UniRef90_A0A6N7TNE8	NA	NA
UHGV-0205910_63	eggNOG-mapper	1423790.BN53_04265	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0205910_63	Pfam	PF14386	NA	DUF4417
UHGV-0205910_63	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0205910_63	Structural annotation	PF14386	NA	NA
UHGV-0205910_64	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0205910_64	UniRef90	UniRef90_A0A6N7TLR7	Phage_Mu_F domain-containing protein	NA
UHGV-0205910_64	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0205910_64	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0205910_64	COG	COG2369	NA	NA
UHGV-0205910_64	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0205910_66	PHROG	phrog_64	portal protein	head and packaging
UHGV-0205910_66	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-0205910_66	eggNOG-mapper	642492.Clole_2764	phage portal protein, SPP1	NA
UHGV-0205910_66	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0205910_66	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0205910_67	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0205910_67	PHROG	phrog_10250	NA	unknown function
UHGV-0205910_67	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-0205910_67	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-0205910_67	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0205910_67	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0205910_67	COG	COG1783	Phage terminase large subunit	NA
UHGV-0205910_67	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0205910_68	UniRef90	UniRef90_UPI0018CC2891	helix-turn-helix domain-containing protein	NA
UHGV-0205910_68	eggNOG-mapper	1226322.HMPREF1545_00042	NA	NA
UHGV-0205910_68	Structural annotation	PF04218	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0205910	Yes	42,192 bps	55.11%	100.00%	0.9822
UHGV-1417341	No	45,225 bps	54.92%	99.90%	0.9817
UHGV-1828149	No	15,961 bps	56.27%	37.79%	0.9826