vOTU-048082

Overview

vOTU representative UHGV-0206555

No. of genomes 14

Genome length 59,124 bps

Completeness 100.00% (complete)

Host Megasphaera massiliensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048082
Number of genomes	14
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 › vSUBFAM-00668 › vGENUS-18464 › vSUBGEN-35038 › vOTU-048082
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Megasphaeraceae › Megasphaera › Megasphaera massiliensis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0206555
BioSample	NA
Genome length	59,124 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	76
CDS density	94.49%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0206555_4	KOfam	K01493	comEB; dCMP deaminase [EC:3.5.4.12]	NA
UHGV-0206555_4	PHROG	phrog_174	dCMP deaminase	DNA, RNA and nucleotide metabolism
UHGV-0206555_4	UniRef90	UniRef90_UPI00197DB886	dCMP deaminase family protein	NA
UHGV-0206555_4	eggNOG-mapper	693746.OBV_35660	MafB19-like deaminase	NA
UHGV-0206555_4	PADLOC	dCTPase	NA	NA
UHGV-0206555_4	Pfam	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
UHGV-0206555_4	COG	COG2131	Deoxycytidylate deaminase	NA
UHGV-0206555_4	Structural annotation	PF00383, TIGR02571, COG2131	NA	NA
UHGV-0206555_5	Structural annotation	PF05263, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0206555_8	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-0206555_9	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0206555_9	UniRef90	UniRef90_A0A2S0M9J8	Transposase	NA
UHGV-0206555_9	eggNOG-mapper	1118057.CAGX01000020_gene1623	transposase activity	NA
UHGV-0206555_9	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0206555_10	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0206555_10	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0206555_10	UniRef90	UniRef90_A0A7C3XQX3	Terminase_3 domain-containing protein	NA
UHGV-0206555_10	eggNOG-mapper	1232428.CAVO010000067_gene427	DNA packaging	NA
UHGV-0206555_10	COG	COG1783	Phage terminase large subunit	NA
UHGV-0206555_10	Structural annotation	PF03354, PF17289, MF_04146, TIGR01547, COG4373	NA	NA
UHGV-0206555_11	PHROG	phrog_1216	portal protein	head and packaging
UHGV-0206555_11	UniRef90	UniRef90_A0A0U1L376	Phage portal protein	NA
UHGV-0206555_11	eggNOG-mapper	1232428.CAVO010000067_gene425	Membrane	NA
UHGV-0206555_11	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0206555_11	Structural annotation	PF16510, MF_04120, TIGR01538, COG4383	NA	NA
UHGV-0206555_13	eggNOG-mapper	1232428.CAVO010000067_gene424	NA	NA
UHGV-0206555_14	PHROG	phrog_1328	major head protein	head and packaging
UHGV-0206555_14	UniRef90	UniRef90_UPI000413677B	NA	NA
UHGV-0206555_14	eggNOG-mapper	1232428.CAVO010000067_gene423	NA	NA
UHGV-0206555_14	Pfam	PF17236	NA	DUF5309
UHGV-0206555_14	Structural annotation	PF17236, MF_04133, NF033394, COG4834	NA	NA
UHGV-0206555_16	Structural annotation	PF20387	NA	NA
UHGV-0206555_17	eggNOG-mapper	1485543.JMME01000020_gene785	NA	NA
UHGV-0206555_17	Structural annotation	PF20387	NA	NA
UHGV-0206555_18	eggNOG-mapper	1232428.CAVO010000067_gene421	cellulase activity	NA
UHGV-0206555_18	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0206555_18	Structural annotation	PF18001, PF01828, PF16389, MF_01905, NF010681, COG3401, COG3506	NA	NA
UHGV-0206555_19	PHROG	phrog_5417	NA	unknown function
UHGV-0206555_19	UniRef90	UniRef90_H8FY63	Putative BcepGomrgp18	NA
UHGV-0206555_19	eggNOG-mapper	1589747.A0A0B5A4F6_9CAUD	NA	NA
UHGV-0206555_19	Structural annotation	PF12571	NA	NA
UHGV-0206555_20	eggNOG-mapper	1150626.PHAMO_80093	extracellular polysaccharide biosynthetic process	NA
UHGV-0206555_20	COG	COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	NA
UHGV-0206555_21	PHROG	phrog_5717	tail protein	tail
UHGV-0206555_21	UniRef90	UniRef90_UPI0008EFFA34	phage tail protein	NA
UHGV-0206555_21	eggNOG-mapper	568816.Acin_1301	tail collar domain protein	NA
UHGV-0206555_21	COG	COG4675	Phage tail collar domain	NA
UHGV-0206555_21	Structural annotation	COG4675	NA	NA
UHGV-0206555_23	eggNOG-mapper	1232428.CAVO010000067_gene418	NA	NA
UHGV-0206555_23	Structural annotation	PF14301	NA	NA
UHGV-0206555_24	PHROG	phrog_6465	tail protein	tail
UHGV-0206555_24	UniRef90	UniRef90_G4Q8U0	Side tail fiber protein from lambdoid prophage Rac	NA
UHGV-0206555_24	eggNOG-mapper	568816.Acin_1822	Collagen triple helix repeat (20 copies)	NA
UHGV-0206555_24	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0206555_26	KOfam	K14059	int; integrase	NA
UHGV-0206555_26	PHROG	phrog_1	integrase	integration and excision
UHGV-0206555_26	UniRef90	UniRef90_UPI0004143D65	tyrosine-type recombinase/integrase	NA
UHGV-0206555_26	eggNOG-mapper	568816.Acin_1821	Phage integrase family	NA
UHGV-0206555_26	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0206555_26	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0206555_26	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0206555_27	PHROG	phrog_4105	NA	unknown function
UHGV-0206555_27	eggNOG-mapper	706434.HMPREF9429_00642	NA	NA
UHGV-0206555_28	PHROG	phrog_28789	NA	unknown function
UHGV-0206555_28	UniRef90	UniRef90_R7MZN4	Conserved domain protein	NA
UHGV-0206555_28	eggNOG-mapper	1273103.NM10_00934	NA	NA
UHGV-0206555_29	KOfam	K07273	acm; lysozyme	NA
UHGV-0206555_29	PHROG	phrog_6745	endolysin	lysis
UHGV-0206555_29	UniRef90	UniRef90_A0A0U1L0T6	Glycosyl hydrolase, family 25	NA
UHGV-0206555_29	eggNOG-mapper	1232428.CAVO010000067_gene417	Glycosyl hydrolases family 25	NA
UHGV-0206555_29	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0206555_29	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0206555_29	Structural annotation	PF01183, NF008377, COG3757	NA	NA
UHGV-0206555_31	eggNOG-mapper	1401067.HMPREF0872_03755	NA	NA
UHGV-0206555_31	Structural annotation	PF11134, MF_03008, NF010237, TIGR04362, COG4257	NA	NA
UHGV-0206555_32	Structural annotation	PF00765, MF_02210, NF007644, COG2153	NA	NA
UHGV-0206555_33	UniRef90	UniRef90_UPI00047F33D6	Hint domain-containing protein	NA
UHGV-0206555_33	eggNOG-mapper	1232428.CAVO010000067_gene416	NA	NA
UHGV-0206555_33	NCBIFam	TIGR01443.1	intein C-terminal splicing region	NA
UHGV-0206555_33	Structural annotation	PF01079, NF038136	NA	NA
UHGV-0206555_35	PHROG	phrog_10691	NA	unknown function
UHGV-0206555_35	UniRef90	UniRef90_UPI000413C241	transglycosylase SLT domain-containing protein	NA
UHGV-0206555_35	eggNOG-mapper	1232428.CAVO010000067_gene414	Type III restriction enzyme, res subunit	NA
UHGV-0206555_35	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0206555_35	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0206555_35	Pfam	PF13871	C-terminal domain on Strawberry notch homologue	Helicase_C_4
UHGV-0206555_35	Pfam	PF18819	Phage MuF-C-terminal domain	MuF_C
UHGV-0206555_35	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0206555_36	KOfam	K07491	rayT; REP-associated tyrosine transposase	NA
UHGV-0206555_36	PHROG	phrog_2577	transposase	integration and excision
UHGV-0206555_36	UniRef90	UniRef90_A0A133SJB5	Transposase-like protein	NA
UHGV-0206555_36	eggNOG-mapper	879309.HMPREF9199_1970	hmm pf01797	NA
UHGV-0206555_36	Pfam	PF01797	Transposase IS200 like	Y1_Tnp
UHGV-0206555_36	NCBIFam	NF033573.1	IS200/IS605 family transposase	NA
UHGV-0206555_36	COG	COG1943	REP element-mobilizing transposase RayT	NA
UHGV-0206555_36	Structural annotation	PF01797, MF_00360, NF033573, COG1943	NA	NA
UHGV-0206555_37	KOfam	K14059	int; integrase	NA
UHGV-0206555_37	PHROG	phrog_1	integrase	integration and excision
UHGV-0206555_37	UniRef90	UniRef90_UPI000408977B	site-specific integrase	NA
UHGV-0206555_37	eggNOG-mapper	1232428.CAVO010000003_gene1025	Belongs to the 'phage' integrase family	NA
UHGV-0206555_37	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0206555_37	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0206555_37	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0206555_37	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0206555_39	PHROG	phrog_87	metallo-protease	other
UHGV-0206555_39	UniRef90	UniRef90_A0A1M6P4K0	Peptidase_M78 domain-containing protein	NA
UHGV-0206555_39	eggNOG-mapper	1123489.AUAN01000010_gene379	IrrE N-terminal-like domain	NA
UHGV-0206555_39	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0206555_39	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0206555_39	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0206555_40	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0206555_40	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0206555_40	UniRef90	UniRef90_UPI0005C953B1	helix-turn-helix domain-containing protein	NA
UHGV-0206555_40	eggNOG-mapper	1232428.CAVO010000067_gene444	Helix-turn-helix XRE-family like proteins	NA
UHGV-0206555_40	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0206555_40	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0206555_40	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0206555_40	Structural annotation	PF01381, MF_02017, NF041951, COG1476	NA	NA
UHGV-0206555_41	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0206555_41	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0206555_41	UniRef90	UniRef90_UPI00041A226F	helix-turn-helix transcriptional regulator	NA
UHGV-0206555_41	eggNOG-mapper	444158.MmarC6_1664	PFAM helix-turn-helix domain protein	NA
UHGV-0206555_41	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0206555_41	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0206555_41	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0206555_42	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0206555_42	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0206555_42	UniRef90	UniRef90_UPI00040C741F	phage antirepressor	NA
UHGV-0206555_42	eggNOG-mapper	887325.HMPREF0381_0355	Phage antirepressor protein KilAC domain	NA
UHGV-0206555_42	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0206555_42	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0206555_42	COG	COG3617	Prophage antirepressor	NA
UHGV-0206555_42	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-0206555_43	PHROG	phrog_7735	excisionase	integration and excision
UHGV-0206555_43	Structural annotation	PF12728, NF033787	NA	NA
UHGV-0206555_44	PHROG	phrog_25045	NA	unknown function
UHGV-0206555_44	UniRef90	UniRef90_UPI0004197DD0	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0206555_44	eggNOG-mapper	1232428.CAVO010000067_gene442	Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery	NA
UHGV-0206555_44	Pfam	PF01476	LysM domain	LysM
UHGV-0206555_44	COG	COG1388	LysM repeat	NA
UHGV-0206555_44	Structural annotation	PF01476, MF_02014, NF010723, COG1388	NA	NA
UHGV-0206555_46	PHROG	phrog_674	NA	unknown function
UHGV-0206555_46	UniRef90	UniRef90_UPI00040C7130	NA	NA
UHGV-0206555_46	eggNOG-mapper	1280689.AUJC01000003_gene937	NA	NA
UHGV-0206555_46	Pfam	PF07083	NA	DUF1351
UHGV-0206555_46	Structural annotation	PF07083	NA	NA
UHGV-0206555_47	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0206555_47	UniRef90	UniRef90_UPI0003F57DB3	ERF family protein	NA
UHGV-0206555_47	eggNOG-mapper	1204534.J9QD21_9CAUD	ERF superfamily	NA
UHGV-0206555_47	Pfam	PF04404	ERF superfamily	ERF
UHGV-0206555_47	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0206555_48	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0206555_48	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0206555_49	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0206555_49	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0206555_49	UniRef90	UniRef90_A0A2S0M9D0	HNHc domain-containing protein	NA
UHGV-0206555_49	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0206555_49	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0206555_49	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0206555_50	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0206555_50	PHROG	phrog_16986	NA	unknown function
UHGV-0206555_50	UniRef90	UniRef90_UPI000411E56C	HNH endonuclease	NA
UHGV-0206555_50	eggNOG-mapper	411490.ANACAC_00801	endonuclease activity	NA
UHGV-0206555_50	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0206555_50	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0206555_50	Structural annotation	PF01844, TIGR02646	NA	NA
UHGV-0206555_51	PHROG	phrog_6251	replisome organizer DnaA-like	DNA, RNA and nucleotide metabolism
UHGV-0206555_51	eggNOG-mapper	1232428.CAVO010000067_gene439	NA	NA
UHGV-0206555_51	Structural annotation	PF09681, PF07261, TIGR01714, TIGR01446, COG3935	NA	NA
UHGV-0206555_52	Structural annotation	PF11417	NA	NA
UHGV-0206555_53	PHROG	phrog_37395	NA	unknown function
UHGV-0206555_54	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0206555_54	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0206555_54	UniRef90	UniRef90_UPI0005CA9A35	single-stranded DNA-binding protein	NA
UHGV-0206555_54	eggNOG-mapper	1232428.CAVO010000067_gene437	single-stranded DNA binding	NA
UHGV-0206555_54	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0206555_54	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0206555_54	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0206555_54	Structural annotation	PF00436, MF_00984, NF005406, COG0629	NA	NA
UHGV-0206555_55	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0206555_55	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0206555_55	UniRef90	UniRef90_A0A2S0MAB6	dUTP diphosphatase	NA
UHGV-0206555_55	eggNOG-mapper	706434.HMPREF9429_00398	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-0206555_55	Pfam	PF00692	dUTPase	dUTPase
UHGV-0206555_55	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0206555_55	Structural annotation	PF00692, MF_00116, NF001862, COG0756	NA	NA
UHGV-0206555_58	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0206555_58	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0206555_58	UniRef90	UniRef90_UPI0005CAF2BA	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0206555_58	eggNOG-mapper	1273103.NM10_01114	Endodeoxyribonuclease RusA	NA
UHGV-0206555_58	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0206555_58	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0206555_60	PHROG	phrog_24490	NA	unknown function
UHGV-0206555_60	eggNOG-mapper	1232428.CAVO010000067_gene435	NA	NA
UHGV-0206555_62	PHROG	phrog_1672	NA	unknown function
UHGV-0206555_62	eggNOG-mapper	394503.Ccel_3301	NA	NA
UHGV-0206555_64	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0206555_64	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0206555_64	UniRef90	UniRef90_UPI0005C86B35	DNA cytosine methyltransferase	NA
UHGV-0206555_64	eggNOG-mapper	1273103.NM10_02362	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0206555_64	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0206555_64	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0206555_64	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0206555_64	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0206555_64	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0206555_65	PHROG	phrog_11227	protease	other
UHGV-0206555_65	UniRef90	UniRef90_A0A7U0GBL0	Membrane protease subunit	NA
UHGV-0206555_65	eggNOG-mapper	1232428.CAVO010000067_gene434	NA	NA
UHGV-0206555_75	PHROG	phrog_98	NA	unknown function
UHGV-0206555_75	UniRef90	UniRef90_UPI0003F72417	YopX family protein	NA
UHGV-0206555_75	Pfam	PF09643	YopX protein	YopX
UHGV-0206555_75	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0206555_76	Structural annotation	PF07867, MF_01302_B, NF001109	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0206555	Yes	59,124 bps	43.30%	100.00%	0.9665
UHGV-0090273	No	56,143 bps	43.54%	93.27%	0.9740
UHGV-2071932	No	56,143 bps	43.54%	93.27%	0.9740
UHGV-0215120	No	37,495 bps	44.53%	59.99%	0.9736
UHGV-1533506	No	36,180 bps	43.42%	57.89%	0.9695
UHGV-1460521	No	35,409 bps	43.41%	56.66%	0.9675
UHGV-1750524	No	22,425 bps	43.37%	37.88%	0.9706
UHGV-1566186	No	22,208 bps	43.28%	37.51%	0.9701
UHGV-1751934	No	20,692 bps	43.40%	34.95%	0.9667
UHGV-1744771	No	20,687 bps	43.27%	34.95%	0.9664
UHGV-1340548	No	20,648 bps	43.45%	34.88%	0.9669
UHGV-1751884	No	20,439 bps	43.34%	34.53%	0.9765
UHGV-1733711	No	21,209 bps	43.35%	33.94%	0.9664
UHGV-0312395	No	21,278 bps	44.40%	33.91%	0.9758