vOTU-048094

Overview

vOTU representative UHGV-0206637

No. of genomes 13

Genome length 34,759 bps

Completeness 100.00% (complete)

Host Ruminococcus F champanellensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048094
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-03507 › vGENUS-10024 › vSUBGEN-12620 › vOTU-048094
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Ruminococcus F › Ruminococcus F champanellensis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0206637
BioSample	SAMN00088016
Genome length	34,759 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	48
CDS density	94.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0206637_1	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0206637_1	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0206637_1	UniRef90	UniRef90_D4LDS3	SOS-response transcriptional repressors (RecA-mediated autopeptidases)	NA
UHGV-0206637_1	eggNOG-mapper	1121423.JONT01000002_gene2372	Peptidase S24-like	NA
UHGV-0206637_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0206637_1	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0206637_1	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0206637_1	Structural annotation	PF00717, PF12844, MF_00015, TIGR00498, TIGR03070, COG1974	NA	NA
UHGV-0206637_2	eggNOG-mapper	411468.CLOSCI_02275	NA	NA
UHGV-0206637_2	Structural annotation	PF14020	NA	NA
UHGV-0206637_3	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0206637_3	PHROG	phrog_95	integrase	integration and excision
UHGV-0206637_3	UniRef90	UniRef90_A0A315Y0V2	DNA invertase Pin-like site-specific DNA recombinase	NA
UHGV-0206637_3	eggNOG-mapper	537013.CLOSTMETH_01697	Resolvase, N terminal domain	NA
UHGV-0206637_3	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0206637_3	Pfam	PF07508	Recombinase	Recombinase
UHGV-0206637_3	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0206637_3	Structural annotation	PF00239, PF07508, PF13408, NF041201, COG1961	NA	NA
UHGV-0206637_4	PHROG	phrog_1863	NA	unknown function
UHGV-0206637_4	eggNOG-mapper	1235797.C816_02840	NA	NA
UHGV-0206637_5	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0206637_5	PHROG	phrog_2649	endolysin	lysis
UHGV-0206637_5	UniRef90	UniRef90_UPI0006D154CD	peptidoglycan-binding protein	NA
UHGV-0206637_5	eggNOG-mapper	1341157.RF007C_02545	hydrolase, family 25	NA
UHGV-0206637_5	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0206637_5	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0206637_5	COG	COG3108	NA	NA
UHGV-0206637_5	Structural annotation	PF05951, PF01471, COG3108, COG3409	NA	NA
UHGV-0206637_6	PHROG	phrog_13256	NA	unknown function
UHGV-0206637_6	eggNOG-mapper	641112.ACOK01000073_gene2912	NA	NA
UHGV-0206637_8	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0206637_8	UniRef90	UniRef90_UPI0011C788B1	phage tail protein	NA
UHGV-0206637_8	eggNOG-mapper	1567011.A0A0A7RUI9_9VIRU	N-acetylmuramoyl-L-alanine amidase activity	NA
UHGV-0206637_8	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0206637_8	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0206637_8	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0206637_8	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0206637_10	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0206637_10	UniRef90	UniRef90_R5ADI0	Putative phage tail component	NA
UHGV-0206637_10	eggNOG-mapper	1121342.AUCO01000004_gene648	tail component	NA
UHGV-0206637_10	COG	COG4722	Phage-related protein YomH	NA
UHGV-0206637_10	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0206637_11	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0206637_11	UniRef90	UniRef90_UPI001C0A6D30	phage tail tape measure protein	NA
UHGV-0206637_11	eggNOG-mapper	428125.CLOLEP_00174	tail tape measure protein, TP901	NA
UHGV-0206637_11	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0206637_11	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0206637_11	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0206637_11	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0206637_12	PHROG	phrog_706	NA	unknown function
UHGV-0206637_12	UniRef90	UniRef90_A0A143ZUS4	Bacteriophage Gp15 protein	NA
UHGV-0206637_12	eggNOG-mapper	428125.CLOLEP_01787	Bacteriophage Gp15 protein	NA
UHGV-0206637_12	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0206637_12	Structural annotation	PF06854	NA	NA
UHGV-0206637_13	UniRef90	UniRef90_A0A143ZVS5	Cse1 domain-containing protein	NA
UHGV-0206637_13	Structural annotation	PF10666	NA	NA
UHGV-0206637_14	PHROG	phrog_820	major tail protein	tail
UHGV-0206637_14	UniRef90	UniRef90_A0A355UYH2	Capsid protein	NA
UHGV-0206637_14	eggNOG-mapper	1231057.AMGD01000018_gene3613	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0206637_14	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0206637_14	COG	COG5492	NA	NA
UHGV-0206637_15	Structural annotation	PF12691	NA	NA
UHGV-0206637_16	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0206637_16	UniRef90	UniRef90_A0A7T9LSG3	Minor capsid protein	NA
UHGV-0206637_16	eggNOG-mapper	935836.JAEL01000021_gene1490	Minor capsid protein	NA
UHGV-0206637_16	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0206637_16	Structural annotation	PF11114	NA	NA
UHGV-0206637_17	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0206637_17	UniRef90	UniRef90_UPI00093A08E9	putative minor capsid protein	NA
UHGV-0206637_17	eggNOG-mapper	997296.PB1_16194	Minor capsid protein	NA
UHGV-0206637_17	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0206637_17	COG	COG5652	VanZ-like family protein (function unknown)	NA
UHGV-0206637_17	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0206637_18	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0206637_18	UniRef90	UniRef90_R5RS10	Protein gp8	NA
UHGV-0206637_18	eggNOG-mapper	935836.JAEL01000086_gene50	NA	NA
UHGV-0206637_19	PHROG	phrog_267	major head protein	head and packaging
UHGV-0206637_19	UniRef90	UniRef90_A0A1C6GMA6	S-l_SbsC_C domain-containing protein	NA
UHGV-0206637_19	eggNOG-mapper	718252.FP2_06660	NA	NA
UHGV-0206637_19	Structural annotation	PF05065, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0206637_20	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0206637_20	eggNOG-mapper	764299.STRIC_2530	NA	NA
UHGV-0206637_20	Structural annotation	PF10788	NA	NA
UHGV-0206637_22	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0206637_22	UniRef90	UniRef90_A0A174ZWV0	Phage minor capsid protein 2	NA
UHGV-0206637_22	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0206637_22	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0206637_22	COG	COG2369	NA	NA
UHGV-0206637_23	PHROG	phrog_533	portal protein	head and packaging
UHGV-0206637_23	UniRef90	UniRef90_A0A349GP64	Portal protein	NA
UHGV-0206637_23	eggNOG-mapper	428125.CLOLEP_01803	NA	NA
UHGV-0206637_23	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0206637_23	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0206637_24	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0206637_24	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0206637_24	UniRef90	UniRef90_A0A1C6FMV1	Phage terminase, large subunit, PBSX family	NA
UHGV-0206637_24	eggNOG-mapper	1120998.AUFC01000030_gene2231	Phage terminase, large subunit, PBSX family	NA
UHGV-0206637_24	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0206637_24	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0206637_24	COG	COG1783	Phage terminase large subunit	NA
UHGV-0206637_24	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0206637_25	PHROG	phrog_2412	NA	unknown function
UHGV-0206637_25	eggNOG-mapper	1232449.BAHV02000018_gene1532	NA	NA
UHGV-0206637_26	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0206637_26	UniRef90	UniRef90_UPI000490E1E4	NA	NA
UHGV-0206637_26	eggNOG-mapper	411471.SUBVAR_05843	NA	NA
UHGV-0206637_26	Pfam	PF07638	ECF sigma factor	Sigma70_ECF
UHGV-0206637_26	Structural annotation	PF07374, MF_00674, TIGR01636, COG2739	NA	NA
UHGV-0206637_27	PHROG	phrog_8684	NA	unknown function
UHGV-0206637_27	UniRef90	UniRef90_A0A1C5PC30	YopX protein	NA
UHGV-0206637_27	eggNOG-mapper	742767.HMPREF9456_02399	YopX protein	NA
UHGV-0206637_27	Pfam	PF09643	YopX protein	YopX
UHGV-0206637_27	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0206637_27	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0206637_29	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0206637_29	UniRef90	UniRef90_A0A315Y0X2	MazG-like nucleotide pyrophosphohydrolase family protein	NA
UHGV-0206637_29	eggNOG-mapper	1203606.HMPREF1526_01892	NA	NA
UHGV-0206637_29	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-0206637_29	Structural annotation	NF001611, COG1694	NA	NA
UHGV-0206637_33	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0206637_33	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0206637_33	UniRef90	UniRef90_A0A348ZC79	DNA primase	NA
UHGV-0206637_33	eggNOG-mapper	1410670.JHXF01000015_gene2274	Phage plasmid primase, P4 family	NA
UHGV-0206637_33	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0206637_33	Pfam	PF19263	NA	DUF5906
UHGV-0206637_33	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0206637_33	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0206637_33	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0206637_33	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF011296, COG3378, COG4983	NA	NA
UHGV-0206637_34	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0206637_34	UniRef90	UniRef90_UPI0006852132	NA	NA
UHGV-0206637_34	eggNOG-mapper	1410670.JHXF01000015_gene2272	NA	NA
UHGV-0206637_34	Pfam	PF05037	NA	DUF669
UHGV-0206637_34	Structural annotation	PF05037, NF004948	NA	NA
UHGV-0206637_35	KOfam	K19789	radD; DNA repair protein RadD	NA
UHGV-0206637_35	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0206637_35	UniRef90	UniRef90_UPI001A983115	DEAD/DEAH box helicase	NA
UHGV-0206637_35	eggNOG-mapper	1410670.JHXF01000015_gene2270	helicase	NA
UHGV-0206637_35	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0206637_35	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0206637_35	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0206637_35	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0206637_35	Structural annotation	PF04851, PF00271, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-0206637_36	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0206637_36	UniRef90	UniRef90_UPI001A9B3ECC	AAA family ATPase	NA
UHGV-0206637_36	eggNOG-mapper	754027.HMPREF9554_00709	NA	NA
UHGV-0206637_36	Pfam	PF13479	AAA domain	AAA_24
UHGV-0206637_36	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0206637_37	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0206637_37	UniRef90	UniRef90_UPI0019171ADA	siphovirus Gp157 family protein	NA
UHGV-0206637_37	eggNOG-mapper	997350.HMPREF9129_1673	Siphovirus Gp157	NA
UHGV-0206637_37	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0206637_37	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0206637_38	PHROG	phrog_15609	NA	unknown function
UHGV-0206637_38	UniRef90	UniRef90_A0A373VML2	NA	NA
UHGV-0206637_38	eggNOG-mapper	641112.ACOK01000073_gene2872	NA	NA
UHGV-0206637_38	Pfam	PF11300	NA	DUF3102
UHGV-0206637_38	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0206637_40	PHROG	phrog_8470	NA	unknown function
UHGV-0206637_40	UniRef90	UniRef90_UPI0019175B9C	PcfJ domain-containing protein	NA
UHGV-0206637_40	eggNOG-mapper	641112.ACOK01000073_gene2870	PcfJ-like protein	NA
UHGV-0206637_40	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0206637_40	Structural annotation	PF14284	NA	NA
UHGV-0206637_41	PHROG	phrog_38338	NA	unknown function
UHGV-0206637_41	UniRef90	UniRef90_UPI00137B3A8C	Cas9 inhibitor AcrIIA9 family protein	NA
UHGV-0206637_41	eggNOG-mapper	641112.ACOK01000073_gene2869	NA	NA
UHGV-0206637_43	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0206637_43	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-0206637_44	Pfam	PF20084	Conjugative transfer region protein TrbK	TrbK
UHGV-0206637_47	Structural annotation	PF11614, TIGR02588, COG2847	NA	NA
UHGV-0206637_48	UniRef90	UniRef90_UPI000FDA89FE	helix-turn-helix domain-containing protein	NA
UHGV-0206637_48	eggNOG-mapper	1410650.JHWL01000003_gene2856	NA	NA
UHGV-0206637_48	Structural annotation	PF05339, NF041951, COG1396	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0206637	Yes	34,759 bps	52.77%	100.00%	0.9816
UHGV-0004339	No	35,727 bps	52.55%	99.90%	0.9814
UHGV-1458901	No	34,483 bps	52.85%	99.90%	0.9812
UHGV-0003622	No	31,101 bps	52.99%	91.06%	0.9810
UHGV-0012082	No	26,862 bps	52.22%	77.49%	0.9813
UHGV-0023238	No	26,357 bps	53.64%	77.29%	0.9823
UHGV-0006379	No	26,478 bps	52.44%	76.42%	0.9821
UHGV-0017551	No	21,633 bps	53.71%	62.37%	0.9827
UHGV-1765144	No	16,449 bps	53.60%	50.61%	0.9800
UHGV-2125910	No	10,793 bps	54.01%	32.65%	0.9783
UHGV-0089591	No	10,311 bps	53.42%	30.66%	0.9827
UHGV-1652622	No	10,311 bps	53.42%	30.66%	0.9826
UHGV-1685995	No	10,666 bps	52.94%	30.29%	0.9808