vOTU-048186

Overview

vOTU representative UHGV-0207243

No. of genomes 2

Genome length 53,751 bps

Completeness 100.00% (complete)

Host UBA11524 sp000437595

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048186
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00252 › vGENUS-00142 › vSUBGEN-40974 › vOTU-048186
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › CAG-74 › UBA11524 › UBA11524 sp000437595
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0207243
BioSample	SAMN09781785
Genome length	53,751 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	95
CDS density	87.59%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0207243_1	PHROG	phrog_28918	NA	unknown function
UHGV-0207243_1	eggNOG-mapper	1235800.C819_00476	tape measure	NA
UHGV-0207243_1	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0207243_2	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0207243_2	Structural annotation	PF20753, PF20195, TIGR01633, COG4722	NA	NA
UHGV-0207243_3	PHROG	phrog_4311	minor head protein	head and packaging
UHGV-0207243_3	UniRef90	UniRef90_K1UCK4	Phage minor structural protein	NA
UHGV-0207243_3	eggNOG-mapper	1341151.ASZU01000008_gene1548	Prophage endopeptidase tail	NA
UHGV-0207243_3	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0207243_3	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0207243_3	COG	COG4926	Phage-related protein	NA
UHGV-0207243_6	UniRef90	UniRef90_K1TIU6	Protein containing SH3, type 3 domain protein	NA
UHGV-0207243_6	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0207243_6	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0207243_6	Structural annotation	PF18342, PF05382, NF040670, COG4991	NA	NA
UHGV-0207243_8	eggNOG-mapper	411470.RUMGNA_00254	NA	NA
UHGV-0207243_9	Structural annotation	PF07638, MF_00674, TIGR02954, COG1846	NA	NA
UHGV-0207243_10	eggNOG-mapper	1384065.JAGS01000001_gene3279	Plasmid pRiA4b ORF-3-like protein	NA
UHGV-0207243_10	Pfam	PF13542	Helix-turn-helix domain of transposase family ISL3	HTH_Tnp_ISL3
UHGV-0207243_10	Pfam	PF13518	Helix-turn-helix domain	HTH_28
UHGV-0207243_10	Structural annotation	PF00196, NF040595, COG2771	NA	NA
UHGV-0207243_12	eggNOG-mapper	1125712.HMPREF1316_1548	NA	NA
UHGV-0207243_13	Structural annotation	PF01402, NF041793, COG4710	NA	NA
UHGV-0207243_17	PHROG	phrog_3754	NA	unknown function
UHGV-0207243_17	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0207243_18	PHROG	phrog_21718	NA	unknown function
UHGV-0207243_18	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0207243_19	PHROG	phrog_22984	NA	unknown function
UHGV-0207243_20	PHROG	phrog_16490	NA	unknown function
UHGV-0207243_20	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0207243_21	PHROG	phrog_20016	NA	unknown function
UHGV-0207243_21	UniRef90	UniRef90_A0A345BPX4	Carbohydrate binding domain/collagen triple helix repeat protein	NA
UHGV-0207243_21	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0207243_21	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0207243_22	PHROG	phrog_28802	NA	unknown function
UHGV-0207243_22	Structural annotation	PF12510	NA	NA
UHGV-0207243_24	KOfam	K14059	int; integrase	NA
UHGV-0207243_24	PHROG	phrog_1	integrase	integration and excision
UHGV-0207243_24	UniRef90	UniRef90_A0A1Q6PWD2	Tyr recombinase domain-containing protein	NA
UHGV-0207243_24	eggNOG-mapper	1203606.HMPREF1526_00215	Phage integrase family	NA
UHGV-0207243_24	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0207243_24	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0207243_24	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0207243_24	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0207243_26	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0207243_26	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0207243_26	UniRef90	UniRef90_K1TK02	Protein containing Helix-turn-helix type 3 domain protein	NA
UHGV-0207243_26	eggNOG-mapper	562743.JH976441_gene411	transcriptional	NA
UHGV-0207243_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_26	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0207243_26	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0207243_27	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0207243_27	UniRef90	UniRef90_K1TNQ1	Transcriptional regulator	NA
UHGV-0207243_27	eggNOG-mapper	443254.Marpi_0298	Bacteriophage CI repressor helix-turn-helix domain	NA
UHGV-0207243_27	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_27	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0207243_27	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0207243_28	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0207243_28	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_28	COG	COG0662	Mannose-6-phosphate isomerase, cupin superfamily	NA
UHGV-0207243_28	Structural annotation	PF03374, PF01381, MF_00535, NF041951, COG1476, COG3645	NA	NA
UHGV-0207243_29	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0207243_29	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0207243_29	UniRef90	UniRef90_A0A3A9INB1	XRE family transcriptional regulator	NA
UHGV-0207243_29	eggNOG-mapper	864563.HMPREF9166_0595	Helix-turn-helix XRE-family like proteins	NA
UHGV-0207243_29	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0207243_29	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0207243_29	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0207243_30	UniRef90	UniRef90_K1U3G0	Transcriptional regulator, XRE family	NA
UHGV-0207243_30	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_30	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0207243_30	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0207243_35	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0207243_35	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0207243_35	UniRef90	UniRef90_K1UYS1	Protein containing Helix-turn-helix type 3 domain protein	NA
UHGV-0207243_35	eggNOG-mapper	365048.Q0H244_9CAUD	protein disulfide oxidoreductase activity	NA
UHGV-0207243_35	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_35	Structural annotation	PF12844, MF_00535, NF041951, COG1476	NA	NA
UHGV-0207243_36	KOfam	K21686	prpR; XRE family transcriptional regulator, fatty acid utilization regulator	NA
UHGV-0207243_36	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0207243_36	UniRef90	UniRef90_K1UES9	Transcriptional regulator	NA
UHGV-0207243_36	eggNOG-mapper	1117108.PAALTS15_10379	Transcriptional regulator	NA
UHGV-0207243_36	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_36	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0207243_36	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-0207243_37	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0207243_37	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0207243_37	UniRef90	UniRef90_UPI0004964948	helix-turn-helix domain-containing protein	NA
UHGV-0207243_37	eggNOG-mapper	240015.ACP_1956	Helix-turn-helix XRE-family like proteins	NA
UHGV-0207243_37	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_37	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0207243_37	Structural annotation	PF12844, NF041951, COG1476	NA	NA
UHGV-0207243_39	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0207243_39	UniRef90	UniRef90_K1U9S5	Protein containing Helix-turn-helix type 3 domain protein	NA
UHGV-0207243_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207243_39	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0207243_39	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0207243_43	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0207243_43	UniRef90	UniRef90_A0A136Q823	DNA-binding helix-turn-helix protein	NA
UHGV-0207243_43	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0207243_43	COG	COG2319	WD40 repeat	NA
UHGV-0207243_43	Structural annotation	PF01381, MF_00535, TIGR03070, COG1476	NA	NA
UHGV-0207243_44	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0207243_45	PHROG	phrog_2205	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0207243_45	UniRef90	UniRef90_UPI0005B25BA0	host-nuclease inhibitor Gam family protein	NA
UHGV-0207243_45	eggNOG-mapper	697281.Mahau_0089	Bacteriophage Mu Gam like protein	NA
UHGV-0207243_45	Pfam	PF07352	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
UHGV-0207243_45	Structural annotation	PF07352	NA	NA
UHGV-0207243_46	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0207243_46	UniRef90	UniRef90_A0A7U9PED5	ERF superfamily protein	NA
UHGV-0207243_46	eggNOG-mapper	1304866.K413DRAFT_1196	ERF superfamily	NA
UHGV-0207243_46	Pfam	PF04404	ERF superfamily	ERF
UHGV-0207243_46	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0207243_46	Structural annotation	PF04404, TIGR00607, COG4319	NA	NA
UHGV-0207243_48	PHROG	phrog_6721	NA	unknown function
UHGV-0207243_48	eggNOG-mapper	679192.HMPREF9013_1123	NA	NA
UHGV-0207243_48	Structural annotation	MF_01408, TIGR02170	NA	NA
UHGV-0207243_50	Structural annotation	PF06257, NF011227	NA	NA
UHGV-0207243_51	PHROG	phrog_398	NA	unknown function
UHGV-0207243_51	UniRef90	UniRef90_K1U9S1	NA	NA
UHGV-0207243_51	eggNOG-mapper	1485543.JMME01000021_gene802	Putative HNHc nuclease	NA
UHGV-0207243_51	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0207243_51	Structural annotation	PF16784	NA	NA
UHGV-0207243_52	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0207243_52	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0207243_52	UniRef90	UniRef90_K1U2S6	Single-strand DNA-binding protein	NA
UHGV-0207243_52	eggNOG-mapper	720554.Clocl_4133	Single-stranded DNA-binding protein	NA
UHGV-0207243_52	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0207243_52	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0207243_52	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0207243_52	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0207243_52	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0207243_53	UniRef90	UniRef90_K1TUR1	NA	NA
UHGV-0207243_53	Pfam	PF19808	NA	DUF6291
UHGV-0207243_53	Structural annotation	PF19808, COG3935	NA	NA
UHGV-0207243_54	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0207243_54	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0207243_54	UniRef90	UniRef90_K1UYR3	Replicative DNA helicase (Fragment)	NA
UHGV-0207243_54	eggNOG-mapper	1307759.JOMJ01000003_gene1934	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	NA
UHGV-0207243_54	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0207243_54	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0207243_54	COG	COG0305	Replicative DNA helicase	NA
UHGV-0207243_54	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0207243_56	Structural annotation	TIGR03655	NA	NA
UHGV-0207243_57	Structural annotation	TIGR03655	NA	NA
UHGV-0207243_58	Structural annotation	TIGR03655	NA	NA
UHGV-0207243_59	Structural annotation	TIGR03655	NA	NA
UHGV-0207243_61	UniRef90	UniRef90_UPI000AA279EE	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0207243_61	eggNOG-mapper	1291050.JAGE01000001_gene2907	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0207243_61	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0207243_62	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0207243_62	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0207243_62	UniRef90	UniRef90_A0A3D2CNF7	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0207243_62	eggNOG-mapper	1291050.JAGE01000001_gene2907	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0207243_62	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0207243_62	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0207243_62	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-0207243_64	Pfam	PF04448	NA	DUF551
UHGV-0207243_64	Structural annotation	PF04448, NF041588	NA	NA
UHGV-0207243_68	PHROG	phrog_824	NA	unknown function
UHGV-0207243_68	UniRef90	UniRef90_K1REM0	VRR-NUC domain protein	NA
UHGV-0207243_68	eggNOG-mapper	665956.HMPREF1032_00132	VRR_NUC	NA
UHGV-0207243_68	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0207243_70	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0207243_70	eggNOG-mapper	903814.ELI_1292	NA	NA
UHGV-0207243_70	Structural annotation	PF04545, MF_00674, NF001072, COG1342	NA	NA
UHGV-0207243_72	Structural annotation	PF01402, NF008671, COG4226	NA	NA
UHGV-0207243_74	PHROG	phrog_25027	NA	unknown function
UHGV-0207243_74	UniRef90	UniRef90_K1SIJ4	ArdcN domain-containing protein	NA
UHGV-0207243_74	eggNOG-mapper	1399942.U3PBI8_9CAUD	NA	NA
UHGV-0207243_74	Pfam	PF08401	N-terminal domain of anti-restriction factor ArdC	ArdcN
UHGV-0207243_76	PHROG	phrog_21498	NA	unknown function
UHGV-0207243_76	UniRef90	UniRef90_UPI0016246E09	chromosome partitioning protein ParB	NA
UHGV-0207243_76	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0207243_76	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0207243_76	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-0207243_77	Structural annotation	PF17941, MF_01917, NF010490, COG3886	NA	NA
UHGV-0207243_78	PHROG	phrog_8680	NA	unknown function
UHGV-0207243_78	UniRef90	UniRef90_A0A3R6D7I3	NA	NA
UHGV-0207243_78	eggNOG-mapper	411902.CLOBOL_05725	NA	NA
UHGV-0207243_78	Pfam	PF14386	NA	DUF4417
UHGV-0207243_78	Structural annotation	PF14386	NA	NA
UHGV-0207243_81	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0207243_81	UniRef90	UniRef90_K1TUM3	Terminase large subunit (Fragment)	NA
UHGV-0207243_81	eggNOG-mapper	254253.R9QN76_9CAUD	NA	NA
UHGV-0207243_81	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5323	NA	NA
UHGV-0207243_82	PHROG	phrog_64	portal protein	head and packaging
UHGV-0207243_82	UniRef90	UniRef90_K1SG85	Phage portal protein, SPP1	NA
UHGV-0207243_82	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0207243_82	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0207243_82	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0207243_84	PHROG	phrog_859	portal protein	head and packaging
UHGV-0207243_84	UniRef90	UniRef90_K1T614	Minor head protein	NA
UHGV-0207243_84	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0207243_84	COG	COG2369	NA	NA
UHGV-0207243_84	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0207243_85	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0207243_85	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0207243_86	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0207243_86	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0207243_86	Structural annotation	PF06810	NA	NA
UHGV-0207243_87	PHROG	phrog_909	major head protein	head and packaging
UHGV-0207243_87	UniRef90	UniRef90_K1TUL5	NA	NA
UHGV-0207243_87	eggNOG-mapper	1536772.R70723_06665	NA	NA
UHGV-0207243_88	PHROG	phrog_29	major head protein	head and packaging
UHGV-0207243_88	UniRef90	UniRef90_K1TJK6	Phage protein (Fragment)	NA
UHGV-0207243_88	eggNOG-mapper	1232443.BAIA02000078_gene29	Phage major capsid protein E	NA
UHGV-0207243_88	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0207243_88	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0207243_88	Structural annotation	PF03864, PF18316, MF_04133, NF041162, COG4653	NA	NA
UHGV-0207243_90	PHROG	phrog_17977	NA	unknown function
UHGV-0207243_90	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0207243_90	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0207243_91	Structural annotation	PF11367	NA	NA
UHGV-0207243_92	PHROG	phrog_885	major tail protein	tail
UHGV-0207243_92	eggNOG-mapper	561177.ANHYDRO_01415	NA	NA
UHGV-0207243_92	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0207243_94	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0207243_94	eggNOG-mapper	913865.DOT_2893	tape measure	NA
UHGV-0207243_94	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0207243_94	Structural annotation	PF06791	NA	NA
UHGV-0207243_95	PHROG	phrog_7168	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0207243_95	eggNOG-mapper	1173135.I4DSI5_9CAUD	endonuclease activity	NA
UHGV-0207243_95	Pfam	PF01541	GIY-YIG catalytic domain	GIY-YIG
UHGV-0207243_95	Structural annotation	PF07453, PF19835, PF04936, TIGR01453	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0207243	Yes	53,751 bps	52.53%	100.00%	0.9793
UHGV-0183500	No	53,782 bps	52.51%	99.90%	0.9783