vOTU-048235

Overview

vOTU representative UHGV-0207534

No. of genomes 3

Genome length 42,390 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048235
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-00627 › vSUBGEN-04460 › vOTU-048235
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0207534
BioSample	SAMN10290217
Genome length	42,390 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	72
CDS density	90.00%
tRNA count	4
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0207534_1	PHROG	phrog_64	portal protein	head and packaging
UHGV-0207534_1	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-0207534_1	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0207534_1	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0207534_1	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0207534_2	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0207534_2	PHROG	phrog_10250	NA	unknown function
UHGV-0207534_2	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-0207534_2	eggNOG-mapper	903814.ELI_3215	Phage terminase large subunit	NA
UHGV-0207534_2	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0207534_2	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0207534_2	COG	COG1783	Phage terminase large subunit	NA
UHGV-0207534_2	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0207534_3	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0207534_3	UniRef90	UniRef90_UPI001C02EFD1	DNA-packaging protein	NA
UHGV-0207534_3	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-0207534_3	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0207534_3	Structural annotation	PF16677	NA	NA
UHGV-0207534_4	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0207534_4	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0207534_5	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-0207534_5	UniRef90	UniRef90_A0A6L5TFB3	Radical SAM protein	NA
UHGV-0207534_5	eggNOG-mapper	552396.HMPREF0863_02707	radical SAM domain protein	NA
UHGV-0207534_5	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-0207534_5	Structural annotation	MF_01864, NF010916, COG2516	NA	NA
UHGV-0207534_6	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0207534_6	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0207534_6	UniRef90	UniRef90_A0A6N7TND6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0207534_6	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-0207534_6	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0207534_6	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0207534_6	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0207534_9	Structural annotation	PF01775, MF_00273, NF001981, COG2157	NA	NA
UHGV-0207534_10	Structural annotation	PF11417	NA	NA
UHGV-0207534_11	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0207534_11	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0207534_11	UniRef90	UniRef90_A0A6N7TLH4	DnaD domain protein	NA
UHGV-0207534_11	eggNOG-mapper	877411.JMMA01000002_gene2292	NA	NA
UHGV-0207534_11	Pfam	PF19808	NA	DUF6291
UHGV-0207534_11	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0207534_11	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0207534_11	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-0207534_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0207534_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0207534_12	UniRef90	UniRef90_D4K451	Single-stranded DNA-binding protein	NA
UHGV-0207534_12	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0207534_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0207534_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0207534_13	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0207534_13	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0207534_13	UniRef90	UniRef90_UPI00122F7988	single-stranded DNA-binding protein	NA
UHGV-0207534_13	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0207534_13	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0207534_13	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0207534_13	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0207534_13	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0207534_14	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0207534_14	UniRef90	UniRef90_UPI0011C8A287	recombinase RecT	NA
UHGV-0207534_14	eggNOG-mapper	33035.JPJF01000071_gene4462	NA	NA
UHGV-0207534_14	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0207534_19	Structural annotation	PF10743, NF033787	NA	NA
UHGV-0207534_20	PHROG	phrog_4433	NA	unknown function
UHGV-0207534_20	eggNOG-mapper	394503.Ccel_3068	regulation of DNA-templated transcription, elongation	NA
UHGV-0207534_20	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0207534_20	Structural annotation	PF12120, NF007410	NA	NA
UHGV-0207534_23	eggNOG-mapper	1121865.OMW_01950	NA	NA
UHGV-0207534_23	Structural annotation	PF17516, NF007197	NA	NA
UHGV-0207534_24	PHROG	phrog_2593	anti-repressor	transcription regulation
UHGV-0207534_24	UniRef90	UniRef90_A0A1Y4RA31	Bro-N domain-containing protein	NA
UHGV-0207534_24	eggNOG-mapper	476272.RUMHYD_03308	BRO family, N-terminal domain	NA
UHGV-0207534_24	COG	COG3617	Prophage antirepressor	NA
UHGV-0207534_24	Structural annotation	PF02498, COG3617	NA	NA
UHGV-0207534_25	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-0207534_25	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-0207534_28	Structural annotation	PF01775, MF_00273, NF001981, COG2157	NA	NA
UHGV-0207534_29	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0207534_29	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0207534_29	UniRef90	UniRef90_A0A844DFR0	Helix-turn-helix domain-containing protein	NA
UHGV-0207534_29	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-0207534_29	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207534_29	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0207534_29	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0207534_31	eggNOG-mapper	1280696.ATVY01000034_gene3237	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation	NA
UHGV-0207534_32	eggNOG-mapper	321955.AAGP01000017_gene2211	NA	NA
UHGV-0207534_32	Structural annotation	PF16900, NF040991	NA	NA
UHGV-0207534_35	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-0207534_35	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207534_35	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-0207534_36	KOfam	K14059	int; integrase	NA
UHGV-0207534_36	PHROG	phrog_1	integrase	integration and excision
UHGV-0207534_36	UniRef90	UniRef90_A0A6N7TNQ4	Tyrosine-type recombinase/integrase	NA
UHGV-0207534_36	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-0207534_36	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0207534_36	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0207534_36	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0207534_38	Structural annotation	PF12510	NA	NA
UHGV-0207534_39	PHROG	phrog_20016	NA	unknown function
UHGV-0207534_39	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0207534_39	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0207534_39	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0207534_40	PHROG	phrog_16490	NA	unknown function
UHGV-0207534_40	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0207534_41	PHROG	phrog_22984	NA	unknown function
UHGV-0207534_42	PHROG	phrog_21718	NA	unknown function
UHGV-0207534_42	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0207534_43	PHROG	phrog_3754	NA	unknown function
UHGV-0207534_43	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-0207534_45	UniRef90	UniRef90_A0A174XWS3	Bacterial regulatory proteins, luxR family	NA
UHGV-0207534_45	eggNOG-mapper	485916.Dtox_2202	Plasmid pRiA4b ORF-3-like protein	NA
UHGV-0207534_45	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0207534_46	PHROG	phrog_13890	NA	unknown function
UHGV-0207534_46	UniRef90	UniRef90_UPI0008F8D321	NA	NA
UHGV-0207534_46	eggNOG-mapper	742741.HMPREF9475_00396	NA	NA
UHGV-0207534_46	Structural annotation	PF10723, NF010256, COG4710	NA	NA
UHGV-0207534_48	Structural annotation	PF07374, MF_00245, NF001072, COG2739	NA	NA
UHGV-0207534_49	PHROG	phrog_15303	NA	unknown function
UHGV-0207534_50	PHROG	phrog_1863	NA	unknown function
UHGV-0207534_50	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-0207534_51	KOfam	K07273	acm; lysozyme	NA
UHGV-0207534_51	PHROG	phrog_291	endolysin	lysis
UHGV-0207534_51	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-0207534_51	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-0207534_51	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0207534_51	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0207534_51	Structural annotation	PF01183, NF007404, COG3757	NA	NA
UHGV-0207534_52	PHROG	phrog_35313	NA	unknown function
UHGV-0207534_52	UniRef90	UniRef90_A0A3E0AFC2	Putative BNR repeat neuraminidase	NA
UHGV-0207534_52	eggNOG-mapper	882082.SaccyDRAFT_3252	BNR repeat-containing family member	NA
UHGV-0207534_52	COG	COG4225	Rhamnogalacturonyl hydrolase YesR	NA
UHGV-0207534_52	Structural annotation	PF05096, MF_03141, NF035926, COG3823	NA	NA
UHGV-0207534_53	PHROG	phrog_3558	tail protein	tail
UHGV-0207534_53	UniRef90	UniRef90_A0A8B3ALT8	Prophage_tail domain-containing protein	NA
UHGV-0207534_53	eggNOG-mapper	411460.RUMTOR_00484	Prophage endopeptidase tail	NA
UHGV-0207534_53	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0207534_53	COG	COG4926	Phage-related protein	NA
UHGV-0207534_53	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0207534_54	UniRef90	UniRef90_A0A7G9WF98	MtfA protein	NA
UHGV-0207534_54	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-0207534_55	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0207534_55	UniRef90	UniRef90_UPI001C038824	tape measure protein	NA
UHGV-0207534_55	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-0207534_55	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0207534_55	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0207534_55	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0207534_55	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0207534_58	PHROG	phrog_885	major tail protein	tail
UHGV-0207534_58	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0207534_58	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0207534_59	Structural annotation	PF13554	NA	NA
UHGV-0207534_60	PHROG	phrog_17977	NA	unknown function
UHGV-0207534_60	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-0207534_60	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0207534_62	PHROG	phrog_544	major head protein	head and packaging
UHGV-0207534_62	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-0207534_62	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0207534_62	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0207534_63	Structural annotation	PF06810	NA	NA
UHGV-0207534_64	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0207534_64	UniRef90	UniRef90_A0A380IPI2	AP2 domain protein	NA
UHGV-0207534_64	eggNOG-mapper	1460635.JCM19038_3433	NA	NA
UHGV-0207534_65	Structural annotation	PF07342	NA	NA
UHGV-0207534_66	UniRef90	UniRef90_A0A3A9HXZ9	CopG family transcriptional regulator	NA
UHGV-0207534_66	eggNOG-mapper	1235800.C819_00492	NA	NA
UHGV-0207534_66	Structural annotation	PF01402, COG4710	NA	NA
UHGV-0207534_67	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0207534_67	UniRef90	UniRef90_A0A6N7TNP6	HK97 gp10 family phage protein	NA
UHGV-0207534_67	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0207534_67	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0207534_67	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0207534_69	PHROG	phrog_8680	NA	unknown function
UHGV-0207534_69	UniRef90	UniRef90_A0A844D688	NA	NA
UHGV-0207534_69	eggNOG-mapper	1423790.BN53_04265	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0207534_69	Pfam	PF14386	NA	DUF4417
UHGV-0207534_69	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0207534_69	Structural annotation	PF14386	NA	NA
UHGV-0207534_71	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0207534_71	UniRef90	UniRef90_A0A6N7TLR7	Phage_Mu_F domain-containing protein	NA
UHGV-0207534_71	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0207534_71	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0207534_71	COG	COG2369	NA	NA
UHGV-0207534_71	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0207534	Yes	42,390 bps	52.79%	100.00%	0.9810
UHGV-0138208	No	25,799 bps	53.50%	61.13%	0.9825
UHGV-1405200	No	25,799 bps	53.50%	61.13%	0.9825