vOTU-048266

Overview

vOTU representative UHGV-0207741

No. of genomes 2

Genome length 36,993 bps

Completeness 100.00% (complete)

Host Ellagibacter

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048266
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00574 › vGENUS-02228 › vSUBGEN-10036 › vOTU-048266
Host taxonomy	Bacteria › Actinobacteriota › Coriobacteriia › Coriobacteriales › Eggerthellaceae › Ellagibacter
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0207741
BioSample	SAMN00074361
Genome length	36,993 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	67
CDS density	93.09%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0207741_2	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0207741_2	UniRef90	UniRef90_UPI001E585BFA	NA	NA
UHGV-0207741_2	eggNOG-mapper	97138.C820_00250	NA	NA
UHGV-0207741_2	Pfam	PF14359	NA	DUF4406
UHGV-0207741_2	Structural annotation	PF14359, COG3613	NA	NA
UHGV-0207741_3	Structural annotation	PF18350, MF_00950, NF000331, COG2139	NA	NA
UHGV-0207741_7	PHROG	phrog_21498	NA	unknown function
UHGV-0207741_7	UniRef90	UniRef90_C7MM70	ParB-like nuclease	NA
UHGV-0207741_7	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0207741_7	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0207741_7	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0207741_7	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0207741_7	Structural annotation	PF02195, PF05869, MF_02015, TIGR00180, TIGR01712, COG5119	NA	NA
UHGV-0207741_8	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0207741_8	UniRef90	UniRef90_A0A261VKA2	Terminase	NA
UHGV-0207741_8	eggNOG-mapper	401526.TcarDRAFT_1282	transposase activity	NA
UHGV-0207741_8	Pfam	PF13518	Helix-turn-helix domain	HTH_28
UHGV-0207741_8	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0207741_8	Structural annotation	PF07141	NA	NA
UHGV-0207741_9	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0207741_9	PHROG	phrog_10250	NA	unknown function
UHGV-0207741_9	UniRef90	UniRef90_A0A7X5E3I0	PBSX family phage terminase large subunit	NA
UHGV-0207741_9	eggNOG-mapper	476272.RUMHYD_01756	NA	NA
UHGV-0207741_9	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0207741_9	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0207741_9	COG	COG1783	Phage terminase large subunit	NA
UHGV-0207741_9	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0207741_10	PHROG	phrog_64	portal protein	head and packaging
UHGV-0207741_10	UniRef90	UniRef90_A0A174A8R0	Phage portal protein, SPP1 family	NA
UHGV-0207741_10	eggNOG-mapper	1256908.HMPREF0373_00485	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0207741_10	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0207741_10	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0207741_11	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0207741_11	UniRef90	UniRef90_A0A415JID1	Phage_Mu_F domain-containing protein	NA
UHGV-0207741_11	eggNOG-mapper	1111135.HMPREF1248_0663	cell adhesion	NA
UHGV-0207741_11	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0207741_11	COG	COG2369	NA	NA
UHGV-0207741_11	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-0207741_14	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0207741_14	UniRef90	UniRef90_A0A6A8M6L6	HK97 gp10 family phage protein	NA
UHGV-0207741_14	eggNOG-mapper	1504822.CCNO01000013_gene284	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0207741_14	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0207741_14	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0207741_14	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-0207741_15	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0207741_15	UniRef90	UniRef90_A0A174AAF6	Clp R domain-containing protein	NA
UHGV-0207741_15	Structural annotation	PF06810	NA	NA
UHGV-0207741_16	PHROG	phrog_212	major head protein	head and packaging
UHGV-0207741_16	UniRef90	UniRef90_A0A2V2FIN1	Phage capsid protein	NA
UHGV-0207741_16	eggNOG-mapper	1232449.BAHV02000010_gene2714	NA	NA
UHGV-0207741_16	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0207741_18	PHROG	phrog_17977	NA	unknown function
UHGV-0207741_18	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0207741_18	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0207741_19	Structural annotation	PF11367	NA	NA
UHGV-0207741_20	PHROG	phrog_885	major tail protein	tail
UHGV-0207741_20	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-0207741_20	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-0207741_20	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0207741_21	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-0207741_23	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0207741_23	UniRef90	UniRef90_A0A3D0EFB4	Phage tail protein (Fragment)	NA
UHGV-0207741_23	eggNOG-mapper	1437608.BBIA_2554	phage tail tape measure protein	NA
UHGV-0207741_23	COG	COG5412	Phage-related protein	NA
UHGV-0207741_24	UniRef90	UniRef90_A0A087E4D3	Phage tail protein	NA
UHGV-0207741_24	eggNOG-mapper	1111121.HMPREF1247_0852	NA	NA
UHGV-0207741_24	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0207741_25	PHROG	phrog_538	minor tail protein	tail
UHGV-0207741_25	UniRef90	UniRef90_A0A229W1D1	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-0207741_25	eggNOG-mapper	78345.BMERY_0868	NA	NA
UHGV-0207741_25	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0207741_25	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0207741_26	PHROG	phrog_28750	NA	unknown function
UHGV-0207741_27	PHROG	phrog_13141	NA	unknown function
UHGV-0207741_27	UniRef90	UniRef90_A0A7K3I4P1	H_lectin domain-containing protein	NA
UHGV-0207741_27	eggNOG-mapper	1680.BADO_1228	NA	NA
UHGV-0207741_27	Structural annotation	PF20747, PF08931	NA	NA
UHGV-0207741_28	PHROG	phrog_1863	NA	unknown function
UHGV-0207741_28	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0207741_29	PHROG	phrog_297	holin	lysis
UHGV-0207741_29	UniRef90	UniRef90_UPI0009F738EC	phage holin	NA
UHGV-0207741_29	eggNOG-mapper	445972.ANACOL_00558	COG COG5546 Small integral membrane protein	NA
UHGV-0207741_29	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0207741_29	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0207741_29	COG	COG5546	NA	NA
UHGV-0207741_29	Structural annotation	COG5546	NA	NA
UHGV-0207741_31	PHROG	phrog_21825	endolysin	lysis
UHGV-0207741_31	UniRef90	UniRef90_A0A6N6NPK6	CHAP domain-containing protein	NA
UHGV-0207741_31	eggNOG-mapper	1111121.HMPREF1247_0780	CHAP domain	NA
UHGV-0207741_31	Pfam	PF05257	CHAP domain	CHAP
UHGV-0207741_31	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0207741_31	Structural annotation	PF06940, TIGR02594, COG3738	NA	NA
UHGV-0207741_32	UniRef90	UniRef90_A0A1Y4BCD8	HTH cro/C1-type domain-containing protein	NA
UHGV-0207741_32	eggNOG-mapper	1121355.KB903379_gene803	NA	NA
UHGV-0207741_32	Structural annotation	PF14590, TIGR03070, COG2944	NA	NA
UHGV-0207741_35	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0207741_38	PHROG	phrog_16490	NA	unknown function
UHGV-0207741_38	eggNOG-mapper	641112.ACOK01000103_gene525	NA	NA
UHGV-0207741_39	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0207741_41	KOfam	K14059	int; integrase	NA
UHGV-0207741_41	PHROG	phrog_1	integrase	integration and excision
UHGV-0207741_41	UniRef90	UniRef90_UPI001C8C9E0C	tyrosine-type recombinase/integrase	NA
UHGV-0207741_41	eggNOG-mapper	350054.Mflv_2786	Belongs to the 'phage' integrase family	NA
UHGV-0207741_41	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0207741_41	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0207741_41	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0207741_43	KOfam	K07504	K07504; predicted type IV restriction endonuclease	NA
UHGV-0207741_43	PHROG	phrog_17239	NA	unknown function
UHGV-0207741_43	UniRef90	UniRef90_UPI001558154E	type I restriction enzyme HsdR N-terminal domain-containing protein	NA
UHGV-0207741_43	eggNOG-mapper	1203602.HMPREF1527_01117	type I restriction enzyme	NA
UHGV-0207741_43	Pfam	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N_2
UHGV-0207741_43	COG	COG4748	NA	NA
UHGV-0207741_43	Structural annotation	PF13588, NF007086, COG4748	NA	NA
UHGV-0207741_44	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0207741_44	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0207741_44	UniRef90	UniRef90_A0A7X5IEG5	LexA family transcriptional regulator	NA
UHGV-0207741_44	eggNOG-mapper	469378.Ccur_03030	Peptidase S24-like	NA
UHGV-0207741_44	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0207741_44	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0207741_44	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0207741_44	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-0207741_46	UniRef90	UniRef90_UPI001F4D634F	helix-turn-helix domain-containing protein	NA
UHGV-0207741_46	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0207741_47	PHROG	phrog_36956	NA	unknown function
UHGV-0207741_50	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0207741_50	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0207741_50	UniRef90	UniRef90_A0A6N6NJA4	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0207741_50	eggNOG-mapper	1120985.AUMI01000019_gene2247	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	NA
UHGV-0207741_50	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0207741_50	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0207741_50	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0207741_53	PHROG	phrog_10056	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0207741_53	UniRef90	UniRef90_A0A133ZE65	Phage recombination protein Bet	NA
UHGV-0207741_53	eggNOG-mapper	1235794.C811_01355	RecT family	NA
UHGV-0207741_53	Pfam	PF03837	RecT family	RecT
UHGV-0207741_53	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-0207741_53	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0207741_53	Structural annotation	PF03837, PF16784, TIGR01913, COG3723	NA	NA
UHGV-0207741_55	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0207741_55	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0207741_55	UniRef90	UniRef90_A0A6N6NPP1	Single-stranded DNA-binding protein	NA
UHGV-0207741_55	eggNOG-mapper	1118060.CAGZ01000028_gene971	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0207741_55	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0207741_55	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0207741_55	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0207741_55	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0207741_55	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0207741_56	UniRef90	UniRef90_A0A6N6NKH0	NA	NA
UHGV-0207741_56	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0207741_56	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0207741_56	Structural annotation	PF14297, PF07191, MF_01187, TIGR01714, NF008806, COG3756, COG2835	NA	NA
UHGV-0207741_57	PHROG	phrog_28142	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0207741_57	eggNOG-mapper	1125712.HMPREF1316_1536	NA	NA
UHGV-0207741_58	eggNOG-mapper	1384484.AEQU_0051	C-5 cytosine-specific DNA methylase	NA
UHGV-0207741_58	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0207741_59	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0207741_59	PHROG	phrog_26324	DNA methyltransferase	other
UHGV-0207741_59	UniRef90	UniRef90_A0A096LKT3	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0207741_59	eggNOG-mapper	742722.HMPREF9463_00216	C-5 cytosine-specific DNA methylase	NA
UHGV-0207741_59	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0207741_59	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0207741_59	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0207741_62	Structural annotation	PF01503, MF_01020, TIGR03188, COG0140	NA	NA
UHGV-0207741_64	PHROG	phrog_21525	NA	unknown function
UHGV-0207741_65	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0207741_65	UniRef90	UniRef90_UPI0015F77E42	Lar family restriction alleviation protein	NA
UHGV-0207741_65	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0207741_65	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0207741_65	Structural annotation	NF007260	NA	NA
UHGV-0207741_66	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0207741	Yes	36,993 bps	65.33%	100.00%	0.9749
UHGV-1489770	No	26,519 bps	65.38%	72.07%	0.9733