vOTU-048324

Overview

vOTU representative UHGV-0208102

No. of genomes 3

Genome length 34,247 bps

Completeness 100.00% (complete)

Host CAG-632 sp000431515

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048324
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-02815 › vGENUS-21324 › vSUBGEN-42489 › vOTU-048324
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › CAG-632 › CAG-632 sp000431515
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0208102
BioSample	NA
Genome length	34,247 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	92.37%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208102_1	PHROG	phrog_20593	NA	unknown function
UHGV-0208102_2	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0208102_2	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0208102_2	UniRef90	UniRef90_R5KD39	Single-stranded DNA-binding protein	NA
UHGV-0208102_2	eggNOG-mapper	357809.Cphy_3773	Single-stranded DNA-binding protein	NA
UHGV-0208102_2	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0208102_2	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0208102_2	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0208102_2	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0208102_2	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0208102_5	UniRef90	UniRef90_UPI00164A90AD	HNH endonuclease	NA
UHGV-0208102_5	eggNOG-mapper	1235800.C819_02254	HNH nucleases	NA
UHGV-0208102_6	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0208102_6	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0208102_6	UniRef90	UniRef90_A0A174GZ53	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0208102_6	eggNOG-mapper	1235800.C819_02255	C-5 cytosine-specific DNA methylase	NA
UHGV-0208102_6	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0208102_6	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0208102_6	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0208102_6	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0208102_7	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0208102_7	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0208102_7	UniRef90	UniRef90_A0A3D2KFS8	DNA methylase N-4	NA
UHGV-0208102_7	eggNOG-mapper	1298920.KI911353_gene2709	DEAD-like helicases superfamily	NA
UHGV-0208102_7	PADLOC	MTase_II_00085	Type II methyltransferase	RM
UHGV-0208102_7	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0208102_7	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0208102_7	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0208102_7	Structural annotation	PF01555, PF16203, PF04851, MF_01821, MF_00472, NF041790, NF008572, COG0553, COG0863	NA	NA
UHGV-0208102_8	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0208102_8	UniRef90	UniRef90_A0A3D5LSK2	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0208102_8	eggNOG-mapper	1095750.HMPREF9970_1671	NA	NA
UHGV-0208102_8	Pfam	PF14359	NA	DUF4406
UHGV-0208102_8	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0208102_8	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0208102_9	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0208102_9	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0208102_9	UniRef90	UniRef90_A0A316PA49	RNase H type-1 domain-containing protein	NA
UHGV-0208102_9	eggNOG-mapper	1235800.C819_02257	RNase H	NA
UHGV-0208102_9	Pfam	PF00075	RNase H	RNase_H
UHGV-0208102_9	COG	COG0328	Ribonuclease HI	NA
UHGV-0208102_9	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0208102_10	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0208102_10	UniRef90	UniRef90_UPI001D0EB55A	helitron helicase-like domain-containing protein	NA
UHGV-0208102_10	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-0208102_10	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0208102_17	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0208102_17	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0208102_17	UniRef90	UniRef90_A0A4R4FGI2	XRE family transcriptional regulator	NA
UHGV-0208102_17	eggNOG-mapper	887325.HMPREF0381_0352	Helix-turn-helix XRE-family like proteins	NA
UHGV-0208102_17	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0208102_17	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208102_17	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-0208102_19	KOfam	K02342	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	NA
UHGV-0208102_19	PHROG	phrog_3989	NA	unknown function
UHGV-0208102_19	UniRef90	UniRef90_UPI00086376EB	3'-5' exoribonuclease	NA
UHGV-0208102_19	eggNOG-mapper	877424.ATWC01000001_gene2107	EXOIII	NA
UHGV-0208102_19	PADLOC	cd06127	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
UHGV-0208102_19	Pfam	PF00929	Exonuclease	RNase_T
UHGV-0208102_19	Pfam	PF00533	BRCA1 C Terminus (BRCT) domain	BRCT
UHGV-0208102_19	NCBIFam	TIGR00573.1	exonuclease, DNA polymerase III, epsilon subunit family	NA
UHGV-0208102_19	COG	COG0272	NAD-dependent DNA ligase	NA
UHGV-0208102_19	Structural annotation	PF00929, PF08797, PF00533, MF_00157, NF004844, COG0847	NA	NA
UHGV-0208102_20	UniRef90	UniRef90_UPI000A26FDC2	NA	NA
UHGV-0208102_20	Pfam	PF15956	NA	DUF4760
UHGV-0208102_21	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0208102_21	UniRef90	UniRef90_B0NDI8	Toxin-antitoxin system, toxin component, HicA family	NA
UHGV-0208102_21	eggNOG-mapper	411468.CLOSCI_01516	periplasmic or secreted lipoprotein	NA
UHGV-0208102_21	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-0208102_21	COG	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	NA
UHGV-0208102_21	Structural annotation	PF07927, COG1724	NA	NA
UHGV-0208102_22	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0208102_22	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-0208102_22	UniRef90	UniRef90_A0A174NB19	HicB family protein	NA
UHGV-0208102_22	eggNOG-mapper	411468.CLOSCI_01515	HicB_like antitoxin of bacterial toxin-antitoxin system	NA
UHGV-0208102_22	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-0208102_22	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0208102_22	Structural annotation	PF15919, COG1598	NA	NA
UHGV-0208102_23	KOfam	K14059	int; integrase	NA
UHGV-0208102_23	PHROG	phrog_1	integrase	integration and excision
UHGV-0208102_23	UniRef90	UniRef90_UPI001D0153FD	site-specific integrase	NA
UHGV-0208102_23	eggNOG-mapper	1280698.AUJS01000007_gene999	Phage integrase family	NA
UHGV-0208102_23	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208102_23	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0208102_23	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0208102_24	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0208102_24	PHROG	phrog_3088	amidase	lysis
UHGV-0208102_24	UniRef90	UniRef90_A0A6N9QEL6	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208102_24	eggNOG-mapper	457396.CSBG_00241	Ami_2	NA
UHGV-0208102_24	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0208102_24	Pfam	PF13946	NA	DUF4214
UHGV-0208102_24	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208102_25	PHROG	phrog_1129	holin	lysis
UHGV-0208102_25	UniRef90	UniRef90_A0A893W7Y5	Phage holin family protein	NA
UHGV-0208102_25	eggNOG-mapper	1232453.BAIF02000013_gene3227	NA	NA
UHGV-0208102_25	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0208102_25	Structural annotation	PF16079	NA	NA
UHGV-0208102_26	PHROG	phrog_1863	NA	unknown function
UHGV-0208102_26	eggNOG-mapper	1203606.HMPREF1526_02027	NA	NA
UHGV-0208102_27	PHROG	phrog_5811	NA	unknown function
UHGV-0208102_27	eggNOG-mapper	1469948.JPNB01000001_gene705	Glycine rich protein	NA
UHGV-0208102_27	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-0208102_28	PHROG	phrog_7064	tail protein	tail
UHGV-0208102_28	eggNOG-mapper	1235800.C819_04023	NA	NA
UHGV-0208102_28	Structural annotation	PF14594, TIGR03361, COG4379	NA	NA
UHGV-0208102_29	PHROG	phrog_20385	minor tail protein	tail
UHGV-0208102_29	UniRef90	UniRef90_UPI001C013719	phage baseplate protein	NA
UHGV-0208102_29	eggNOG-mapper	1469948.JPNB01000001_gene703	NA	NA
UHGV-0208102_29	Structural annotation	PF16774, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0208102_30	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0208102_30	eggNOG-mapper	1321784.HMPREF1987_01082	phage tail tape measure protein	NA
UHGV-0208102_30	COG	COG1511	NA	NA
UHGV-0208102_31	PHROG	phrog_1633	NA	unknown function
UHGV-0208102_31	UniRef90	UniRef90_A0A847L140	NA	NA
UHGV-0208102_31	eggNOG-mapper	1214184.ALKY01000039_gene910	NA	NA
UHGV-0208102_31	Pfam	PF17318	NA	DUF5361
UHGV-0208102_31	Structural annotation	PF17318	NA	NA
UHGV-0208102_32	PHROG	phrog_1526	NA	unknown function
UHGV-0208102_33	PHROG	phrog_117	major tail protein	tail
UHGV-0208102_33	UniRef90	UniRef90_A0A356C4M0	Phage tail protein	NA
UHGV-0208102_33	eggNOG-mapper	748224.HMPREF9436_00696	domain, Protein	NA
UHGV-0208102_33	COG	COG5492	NA	NA
UHGV-0208102_33	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0208102_34	PHROG	phrog_123	tail terminator	connector
UHGV-0208102_34	UniRef90	UniRef90_A0A2A5RIK6	NA	NA
UHGV-0208102_34	eggNOG-mapper	1321820.HMPREF1983_00928	NA	NA
UHGV-0208102_34	Structural annotation	PF06141	NA	NA
UHGV-0208102_35	PHROG	phrog_387	neck protein	connector
UHGV-0208102_35	eggNOG-mapper	936375.HMPREF1152_0683	NA	NA
UHGV-0208102_36	PHROG	phrog_501	head closure Hc1	connector
UHGV-0208102_36	UniRef90	UniRef90_G2SN45	NA	NA
UHGV-0208102_36	eggNOG-mapper	1069534.LRC_07300	NA	NA
UHGV-0208102_36	Structural annotation	PF12206, COG5614	NA	NA
UHGV-0208102_37	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-0208102_37	UniRef90	UniRef90_R6G3G4	Phage protein Gp19/Gp15/Gp42	NA
UHGV-0208102_37	Structural annotation	PF09355	NA	NA
UHGV-0208102_39	PHROG	phrog_10	major head protein	head and packaging
UHGV-0208102_39	UniRef90	UniRef90_A0A844E6Z2	Phage major capsid protein	NA
UHGV-0208102_39	eggNOG-mapper	205876.Q855V6_9CAUD	peptidase activity	NA
UHGV-0208102_39	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0208102_39	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0208102_39	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0208102_40	PHROG	phrog_233	head scaffolding protein	head and packaging
UHGV-0208102_40	UniRef90	UniRef90_A0A3E4GMR3	NA	NA
UHGV-0208102_40	eggNOG-mapper	78345.BMERY_0881	NA	NA
UHGV-0208102_40	Structural annotation	PF14265	NA	NA
UHGV-0208102_42	PHROG	phrog_193	head maturation protease	head and packaging
UHGV-0208102_42	UniRef90	UniRef90_UPI00195E2FAF	minor capsid protein	NA
UHGV-0208102_42	eggNOG-mapper	748224.HMPREF9436_01469	NA	NA
UHGV-0208102_42	COG	COG5529	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	NA
UHGV-0208102_42	Structural annotation	PF20344	NA	NA
UHGV-0208102_43	PHROG	phrog_104	portal protein	head and packaging
UHGV-0208102_43	UniRef90	UniRef90_A0A844E732	Phage portal protein	NA
UHGV-0208102_43	eggNOG-mapper	1123263.AUKY01000112_gene2059	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0208102_43	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0208102_43	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0208102_44	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0208102_44	UniRef90	UniRef90_UPI001D0087E2	terminase large subunit	NA
UHGV-0208102_44	eggNOG-mapper	1123263.AUKY01000112_gene2060	phage terminase, large subunit	NA
UHGV-0208102_44	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0208102_44	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0208102_44	Structural annotation	PF20441, PF03354, MF_04146, NF033889, COG4626	NA	NA
UHGV-0208102_45	UniRef90	UniRef90_R6GFM0	Conserved domain protein	NA
UHGV-0208102_45	Structural annotation	PF19962	NA	NA
UHGV-0208102_46	PHROG	phrog_338	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208102_46	UniRef90	UniRef90_UPI00156E0A7C	HNH endonuclease	NA
UHGV-0208102_46	eggNOG-mapper	748224.HMPREF9436_01465	NA	NA
UHGV-0208102_47	PHROG	phrog_11520	NA	unknown function
UHGV-0208102_47	eggNOG-mapper	1209989.TepiRe1_1148	NA	NA
UHGV-0208102_47	Structural annotation	PF14337	NA	NA
UHGV-0208102_48	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0208102_48	UniRef90	UniRef90_UPI000E44A7EA	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0208102_48	eggNOG-mapper	397290.C810_01391	NA	NA
UHGV-0208102_48	Structural annotation	MF_00307	NA	NA
UHGV-0208102_50	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0208102_50	UniRef90	UniRef90_A0A412AWF1	Restriction alleviation protein, Lar family	NA
UHGV-0208102_50	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0208102_50	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0208102_50	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0208102_51	PHROG	phrog_874	NA	unknown function
UHGV-0208102_51	UniRef90	UniRef90_A0A4P6LRJ9	ASCH domain-containing protein	NA
UHGV-0208102_51	eggNOG-mapper	1235793.C809_02214	NA	NA
UHGV-0208102_51	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0208102_52	PHROG	phrog_8684	NA	unknown function
UHGV-0208102_52	UniRef90	UniRef90_A0A416ZXS5	YopX domain-containing protein	NA
UHGV-0208102_52	eggNOG-mapper	742733.HMPREF9469_00912	YopX protein	NA
UHGV-0208102_52	Pfam	PF09643	YopX protein	YopX
UHGV-0208102_52	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0208102_52	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0208102_53	PHROG	phrog_874	NA	unknown function
UHGV-0208102_53	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0208102_53	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208102	Yes	34,247 bps	44.47%	100.00%	0.9798
UHGV-0184804	No	22,050 bps	43.11%	45.78%	0.9781
UHGV-0189442	No	13,018 bps	46.26%	38.90%	0.9802