vOTU-048345

Overview

vOTU representative UHGV-0208342

No. of genomes 1

Genome length 41,142 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048345
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-00429 › vSUBGEN-19033 › vOTU-048345
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208342
BioSample	SAMN00067442
Genome length	41,142 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	73
CDS density	88.51%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208342_1	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0208342_1	UniRef90	UniRef90_A0A1Y3ZRE4	HTH cro/C1-type domain-containing protein	NA
UHGV-0208342_1	eggNOG-mapper	913865.DOT_5671	Helix-turn-helix XRE-family like proteins	NA
UHGV-0208342_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208342_1	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0208342_1	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-0208342_7	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-0208342_7	eggNOG-mapper	266265.Bxe_A3948	Helix-turn-helix domain	NA
UHGV-0208342_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208342_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208342_7	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-0208342_8	KOfam	K14059	int; integrase	NA
UHGV-0208342_8	PHROG	phrog_1	integrase	integration and excision
UHGV-0208342_8	UniRef90	UniRef90_E2ZNV1	Site-specific recombinase, phage integrase family	NA
UHGV-0208342_8	eggNOG-mapper	748224.HMPREF9436_03382	Belongs to the 'phage' integrase family	NA
UHGV-0208342_8	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0208342_8	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208342_8	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0208342_8	Structural annotation	PF00589, PF14659, MF_01808, NF007246, COG4973	NA	NA
UHGV-0208342_10	Structural annotation	PF12510	NA	NA
UHGV-0208342_11	PHROG	phrog_20016	NA	unknown function
UHGV-0208342_11	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0208342_11	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0208342_11	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0208342_13	PHROG	phrog_16490	NA	unknown function
UHGV-0208342_13	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0208342_14	PHROG	phrog_22984	NA	unknown function
UHGV-0208342_15	PHROG	phrog_21718	NA	unknown function
UHGV-0208342_15	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0208342_16	PHROG	phrog_3754	NA	unknown function
UHGV-0208342_16	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-0208342_17	UniRef90	UniRef90_A0A1Y3R5J8	RHH_1 domain-containing protein	NA
UHGV-0208342_17	eggNOG-mapper	1160721.RBI_I00206	NA	NA
UHGV-0208342_17	Structural annotation	PF10723	NA	NA
UHGV-0208342_21	PHROG	phrog_15303	NA	unknown function
UHGV-0208342_22	PHROG	phrog_1863	NA	unknown function
UHGV-0208342_22	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-0208342_23	KOfam	K07273	acm; lysozyme	NA
UHGV-0208342_23	PHROG	phrog_291	endolysin	lysis
UHGV-0208342_23	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-0208342_23	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-0208342_23	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0208342_23	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0208342_23	Structural annotation	PF01183, TIGR04053, COG3757	NA	NA
UHGV-0208342_24	PHROG	phrog_28526	NA	unknown function
UHGV-0208342_24	UniRef90	UniRef90_A0A415D4T1	NA	NA
UHGV-0208342_24	eggNOG-mapper	411462.DORLON_00769	NA	NA
UHGV-0208342_24	Pfam	PF04255	NA	DUF433
UHGV-0208342_26	PHROG	phrog_5717	tail protein	tail
UHGV-0208342_26	eggNOG-mapper	1042156.CXIVA_07170	tail collar domain protein	NA
UHGV-0208342_26	COG	COG4675	Phage tail collar domain	NA
UHGV-0208342_27	UniRef90	UniRef90_A0A6N3CFG4	Phage tail protein	NA
UHGV-0208342_27	eggNOG-mapper	1235792.C808_00094	phage tail	NA
UHGV-0208342_27	COG	COG4722	Phage-related protein YomH	NA
UHGV-0208342_27	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-0208342_29	PHROG	phrog_3558	tail protein	tail
UHGV-0208342_29	UniRef90	UniRef90_UPI001C01D15B	phage tail protein	NA
UHGV-0208342_29	eggNOG-mapper	1120933.ATUY01000004_gene1009	Prophage endopeptidase tail	NA
UHGV-0208342_29	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0208342_29	COG	COG4926	Phage-related protein	NA
UHGV-0208342_29	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0208342_30	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-0208342_30	UniRef90	UniRef90_UPI001C038824	tape measure protein	NA
UHGV-0208342_30	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-0208342_30	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0208342_30	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0208342_30	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0208342_30	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0208342_33	PHROG	phrog_885	major tail protein	tail
UHGV-0208342_33	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-0208342_33	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0208342_34	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-0208342_34	Structural annotation	PF13554	NA	NA
UHGV-0208342_35	PHROG	phrog_17977	NA	unknown function
UHGV-0208342_35	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-0208342_35	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0208342_37	PHROG	phrog_544	major head protein	head and packaging
UHGV-0208342_37	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-0208342_37	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-0208342_37	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0208342_39	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208342_39	UniRef90	UniRef90_A0A380IPI2	AP2 domain protein	NA
UHGV-0208342_39	eggNOG-mapper	1460635.JCM19038_3433	NA	NA
UHGV-0208342_40	Structural annotation	PF07342	NA	NA
UHGV-0208342_41	UniRef90	UniRef90_A0A3A9HXZ9	CopG family transcriptional regulator	NA
UHGV-0208342_41	eggNOG-mapper	1235800.C819_00492	NA	NA
UHGV-0208342_41	Structural annotation	PF01402, COG4710	NA	NA
UHGV-0208342_42	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0208342_42	UniRef90	UniRef90_A0A6N7TNP6	HK97 gp10 family phage protein	NA
UHGV-0208342_42	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0208342_42	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0208342_42	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0208342_43	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0208342_43	UniRef90	UniRef90_UPI00137B411D	ORF6C domain-containing protein	NA
UHGV-0208342_43	eggNOG-mapper	411490.ANACAC_00813	BRO family, N-terminal domain	NA
UHGV-0208342_43	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0208342_43	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0208342_43	COG	COG3617	Prophage antirepressor	NA
UHGV-0208342_43	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-0208342_45	Structural annotation	PF07342	NA	NA
UHGV-0208342_46	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0208342_46	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0208342_46	UniRef90	UniRef90_UPI001D0E8318	helix-turn-helix transcriptional regulator	NA
UHGV-0208342_46	eggNOG-mapper	1117108.PAALTS15_13457	Transcriptional regulator	NA
UHGV-0208342_46	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0208342_46	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0208342_46	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0208342_47	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0208342_47	UniRef90	UniRef90_A0A6N7TLR7	Phage_Mu_F domain-containing protein	NA
UHGV-0208342_47	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0208342_47	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0208342_47	COG	COG2369	NA	NA
UHGV-0208342_47	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0208342_48	PHROG	phrog_64	portal protein	head and packaging
UHGV-0208342_48	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-0208342_48	eggNOG-mapper	1042156.CXIVA_01850	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0208342_48	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0208342_48	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0208342_49	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0208342_49	PHROG	phrog_10250	NA	unknown function
UHGV-0208342_49	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-0208342_49	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-0208342_49	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0208342_49	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0208342_49	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0208342_49	COG	COG1783	Phage terminase large subunit	NA
UHGV-0208342_49	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0208342_50	UniRef90	UniRef90_UPI0018CC2891	helix-turn-helix domain-containing protein	NA
UHGV-0208342_50	eggNOG-mapper	1235790.C805_00037	NA	NA
UHGV-0208342_50	Structural annotation	PF04218	NA	NA
UHGV-0208342_52	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0208342_52	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0208342_53	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0208342_53	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0208342_53	UniRef90	UniRef90_UPI0012DF3C2B	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0208342_53	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-0208342_53	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0208342_53	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0208342_53	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0208342_54	PHROG	phrog_3136	NA	unknown function
UHGV-0208342_54	UniRef90	UniRef90_UPI001C02A61B	ASCH domain-containing protein	NA
UHGV-0208342_54	eggNOG-mapper	452637.Oter_0349	rRNA binding	NA
UHGV-0208342_54	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0208342_54	Structural annotation	PF04266, MF_00684, NF003443, COG4933	NA	NA
UHGV-0208342_57	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0208342_57	UniRef90	UniRef90_A0A417JTT5	DNA cytosine methyltransferase	NA
UHGV-0208342_57	eggNOG-mapper	1095750.HMPREF9970_0173	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0208342_57	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0208342_57	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0208342_59	Structural annotation	PF01775, MF_00273, NF001981, COG2157	NA	NA
UHGV-0208342_60	PHROG	phrog_16304	NA	unknown function
UHGV-0208342_60	UniRef90	UniRef90_A0A3F3JUK4	NA	NA
UHGV-0208342_60	Pfam	PF19808	NA	DUF6291
UHGV-0208342_60	Structural annotation	PF19808	NA	NA
UHGV-0208342_61	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0208342_61	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0208342_61	UniRef90	UniRef90_UPI001C00AA91	single-stranded DNA-binding protein	NA
UHGV-0208342_61	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0208342_61	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0208342_61	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0208342_61	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0208342_61	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0208342_61	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0208342_62	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208342_62	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0208342_62	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0208342_62	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-0208342_64	Structural annotation	PF06718	NA	NA
UHGV-0208342_66	eggNOG-mapper	596152.DesU5LDRAFT_1910	NA	NA
UHGV-0208342_66	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-0208342_68	Structural annotation	PF12270, NF040944	NA	NA
UHGV-0208342_69	UniRef90	UniRef90_UPI00130EBC54	NA	NA
UHGV-0208342_69	eggNOG-mapper	445972.ANACOL_01800	NA	NA
UHGV-0208342_69	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0208342_69	Structural annotation	PF05339, MF_00535, NF041951, COG3655	NA	NA
UHGV-0208342_72	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0208342_72	UniRef90	UniRef90_UPI001C039A6C	ORF6C domain-containing protein	NA
UHGV-0208342_72	eggNOG-mapper	748224.HMPREF9436_01449	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-0208342_72	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0208342_72	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0208342_72	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0208342_72	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0208342_72	Structural annotation	PF10552, PF09669, TIGR02681, COG3646	NA	NA
UHGV-0208342_73	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0208342_73	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0208342_73	UniRef90	UniRef90_UPI0012DC3E77	helix-turn-helix domain-containing protein	NA
UHGV-0208342_73	eggNOG-mapper	1123511.KB905843_gene986	sequence-specific DNA binding	NA
UHGV-0208342_73	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208342_73	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0208342_73	Structural annotation	PF01381, NF041951, COG1396	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208342	Yes	41,142 bps	54.20%	100.00%	0.9823