vOTU-048359

Overview

vOTU representative UHGV-0208492

No. of genomes 2

Genome length 45,316 bps

Completeness 100.00% (complete)

Host Alistipes shahii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048359
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00009 › vSUBFAM-00597 › vGENUS-17704 › vSUBGEN-33092 › vOTU-048359
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › Rikenellaceae › Alistipes › Alistipes shahii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208492
BioSample	SAMN11893774
Genome length	45,316 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	75
CDS density	87.09%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208492_1	KOfam	K21138	HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]	NA
UHGV-0208492_1	PHROG	phrog_990	metal-dependent phosphohydrolase	other
UHGV-0208492_1	UniRef90	UniRef90_UPI000981FCC1	phosphohydrolase	NA
UHGV-0208492_1	eggNOG-mapper	679189.HMPREF9019_0954	phosphohydrolase	NA
UHGV-0208492_1	Pfam	PF13328	HD domain	HD_4
UHGV-0208492_1	COG	COG0317	(p)ppGpp synthase/hydrolase, HD superfamily	NA
UHGV-0208492_7	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0208492_7	UniRef90	UniRef90_UPI001CF85C41	ERF family protein	NA
UHGV-0208492_7	eggNOG-mapper	762982.HMPREF9442_00551	Erf family	NA
UHGV-0208492_7	Pfam	PF04404	ERF superfamily	ERF
UHGV-0208492_7	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0208492_9	eggNOG-mapper	1121100.JCM6294_521	NA	NA
UHGV-0208492_10	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0208492_10	eggNOG-mapper	1122991.BAIZ01000025_gene1850	NA	NA
UHGV-0208492_10	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0208492_11	PHROG	phrog_1408	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0208492_11	UniRef90	UniRef90_UPI000B1F837B	NA	NA
UHGV-0208492_11	eggNOG-mapper	1123248.KB893341_gene827	NA	NA
UHGV-0208492_11	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0208492_11	Structural annotation	PF10771, NF000244	NA	NA
UHGV-0208492_13	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208492_13	UniRef90	UniRef90_UPI0018AB7B79	NUMOD4 domain-containing protein	NA
UHGV-0208492_13	eggNOG-mapper	357276.EL88_11520	HNH endonuclease domain protein	NA
UHGV-0208492_13	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0208492_13	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0208492_13	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0208492_13	Structural annotation	PF07463	NA	NA
UHGV-0208492_14	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0208492_14	eggNOG-mapper	202954.BBNK01000034_gene3798	NA	NA
UHGV-0208492_14	Structural annotation	PF02075, MF_00034, NF000711, COG2410	NA	NA
UHGV-0208492_15	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-0208492_15	PHROG	phrog_9562	NA	unknown function
UHGV-0208492_15	UniRef90	UniRef90_A0A5B5VMT7	Pentapeptide repeat-containing protein	NA
UHGV-0208492_15	eggNOG-mapper	1226322.HMPREF1545_00011	Pentapeptide repeats (8 copies)	NA
UHGV-0208492_15	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-0208492_15	Pfam	PF19062	NA	DUF5758
UHGV-0208492_15	COG	COG1357	NA	NA
UHGV-0208492_15	Structural annotation	PF19062, PF13599	NA	NA
UHGV-0208492_16	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0208492_16	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0208492_16	UniRef90	UniRef90_A0A6I2NIA6	Methyltransferase	NA
UHGV-0208492_16	eggNOG-mapper	1166018.FAES_1810	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0208492_16	PADLOC	MTase_II_00173	Type II methyltransferase	RM
UHGV-0208492_16	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0208492_16	COG	COG0863	DNA modification methylase	NA
UHGV-0208492_16	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-0208492_17	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0208492_17	PHROG	phrog_1071	DNA methyltransferase	other
UHGV-0208492_17	UniRef90	UniRef90_UPI000D0E75B9	N-6 DNA methylase	NA
UHGV-0208492_17	eggNOG-mapper	411476.BACOVA_03912	site-specific DNA-methyltransferase (adenine-specific) activity	NA
UHGV-0208492_17	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0208492_17	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0208492_17	Structural annotation	PF01596, TIGR02469, COG3963	NA	NA
UHGV-0208492_18	KOfam	K14059	int; integrase	NA
UHGV-0208492_18	PHROG	phrog_1	integrase	integration and excision
UHGV-0208492_18	UniRef90	UniRef90_A0A1Q6GQP6	Tyr recombinase domain-containing protein	NA
UHGV-0208492_18	eggNOG-mapper	411476.BACOVA_03915	Belongs to the 'phage' integrase family	NA
UHGV-0208492_18	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0208492_18	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208492_18	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0208492_18	Structural annotation	PF00589, PF13102, MF_02055, NF040815, COG4974	NA	NA
UHGV-0208492_24	eggNOG-mapper	742725.HMPREF9450_02087	NA	NA
UHGV-0208492_25	PHROG	phrog_2776	NA	unknown function
UHGV-0208492_25	UniRef90	UniRef90_UPI001297AEBA	MmcB family DNA repair protein	NA
UHGV-0208492_25	eggNOG-mapper	1283340.Q6WI17_BPKVM	NA	NA
UHGV-0208492_25	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-0208492_26	PHROG	phrog_874	NA	unknown function
UHGV-0208492_26	eggNOG-mapper	1121098.HMPREF1534_01095	NA	NA
UHGV-0208492_26	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0208492_29	PHROG	phrog_8684	NA	unknown function
UHGV-0208492_29	UniRef90	UniRef90_UPI0011071E51	YopX family protein	NA
UHGV-0208492_29	eggNOG-mapper	1234679.BN424_2637	YopX protein	NA
UHGV-0208492_29	Pfam	PF09643	YopX protein	YopX
UHGV-0208492_29	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0208492_29	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0208492_34	UniRef90	UniRef90_UPI000B5C1847	helix-turn-helix domain-containing protein	NA
UHGV-0208492_34	eggNOG-mapper	483216.BACEGG_03179	NA	NA
UHGV-0208492_35	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0208492_35	PHROG	phrog_1	integrase	integration and excision
UHGV-0208492_35	UniRef90	UniRef90_R7JKN8	Site-specific recombinase XerD	NA
UHGV-0208492_35	eggNOG-mapper	679935.Alfi_0474	Arm DNA-binding domain	NA
UHGV-0208492_35	Pfam	PF17293	Arm DNA-binding domain	Arm-DNA-bind_5
UHGV-0208492_35	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0208492_35	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208492_35	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0208492_35	Structural annotation	PF17293, PF13102, PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0208492_39	Structural annotation	PF10628	NA	NA
UHGV-0208492_44	eggNOG-mapper	445970.ALIPUT_01633	Bacterial dnaA protein helix-turn-helix	NA
UHGV-0208492_44	Structural annotation	PF08299, NF004688	NA	NA
UHGV-0208492_46	PHROG	phrog_26448	NA	unknown function
UHGV-0208492_46	eggNOG-mapper	742726.HMPREF9448_01214	NA	NA
UHGV-0208492_46	Pfam	PF20647	NA	DUF6808
UHGV-0208492_46	Structural annotation	PF20647	NA	NA
UHGV-0208492_47	PHROG	phrog_873	endolysin	head and packaging
UHGV-0208492_47	UniRef90	UniRef90_UPI0018ABA41D	structural protein P5	NA
UHGV-0208492_47	eggNOG-mapper	411477.PARMER_01682	NA	NA
UHGV-0208492_48	UniRef90	UniRef90_UPI0018A97727	phage holin family protein	NA
UHGV-0208492_48	eggNOG-mapper	575615.HMPREF0670_00654	Bacteriophage holin family	NA
UHGV-0208492_48	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0208492_48	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0208492_49	PHROG	phrog_32779	NA	unknown function
UHGV-0208492_49	COG	COG5295	Autotransporter adhesin	NA
UHGV-0208492_51	PHROG	phrog_21217	NA	unknown function
UHGV-0208492_52	PHROG	phrog_14476	virion structural protein	head and packaging
UHGV-0208492_52	eggNOG-mapper	1235803.C825_02656	NA	NA
UHGV-0208492_52	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0208492_53	PHROG	phrog_33698	NA	unknown function
UHGV-0208492_53	UniRef90	UniRef90_UPI001873A18B	BACON domain-containing protein	NA
UHGV-0208492_53	eggNOG-mapper	742767.HMPREF9456_03372	NA	NA
UHGV-0208492_53	Structural annotation	PF15006, NF041425, COG1470, COG4379	NA	NA
UHGV-0208492_54	Structural annotation	PF19266, TIGR02126, COG5437	NA	NA
UHGV-0208492_56	Structural annotation	PF05561	NA	NA
UHGV-0208492_60	PHROG	phrog_10	major head protein	head and packaging
UHGV-0208492_60	UniRef90	UniRef90_A0A1V5ID18	Phage capsid family protein	NA
UHGV-0208492_60	Structural annotation	PF05065, PF15188, MF_04133, TIGR01554, COG4653	NA	NA
UHGV-0208492_61	KOfam	K06904	NA	NA
UHGV-0208492_61	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0208492_61	UniRef90	UniRef90_UPI000B385EC9	HK97 family phage prohead protease	NA
UHGV-0208492_61	eggNOG-mapper	449673.BACSTE_00581	Caudovirus prohead serine protease	NA
UHGV-0208492_61	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0208492_61	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0208492_61	COG	COG3740	Phage head maturation protease	NA
UHGV-0208492_61	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0208492_62	PHROG	phrog_12	portal protein	head and packaging
UHGV-0208492_62	UniRef90	UniRef90_UPI001A90B2FB	phage portal protein	NA
UHGV-0208492_62	eggNOG-mapper	449673.BACSTE_00582	Phage portal protein	NA
UHGV-0208492_62	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0208492_62	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0208492_63	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0208492_63	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0208492_63	UniRef90	UniRef90_A0A497PCX3	Terminase	NA
UHGV-0208492_63	eggNOG-mapper	313596.RB2501_01375	Phage terminase large subunit	NA
UHGV-0208492_63	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0208492_63	COG	COG1783	Phage terminase large subunit	NA
UHGV-0208492_63	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0208492_64	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0208492_64	eggNOG-mapper	1500259.JQLD01000001_gene3763	DNA-packaging protein gp3	NA
UHGV-0208492_64	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0208492_64	Structural annotation	PF16677	NA	NA
UHGV-0208492_68	UniRef90	UniRef90_A0A4Q0J971	XRE family transcriptional regulator	NA
UHGV-0208492_68	eggNOG-mapper	1127692.HMPREF9075_00502	NA	NA
UHGV-0208492_68	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-0208492_68	Structural annotation	PF01381, NF007257, COG3655	NA	NA
UHGV-0208492_72	Structural annotation	NF033948	NA	NA
UHGV-0208492_74	PHROG	phrog_4973	NA	unknown function
UHGV-0208492_74	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-0208492_74	Structural annotation	PF14090, NF040939, COG4738	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208492	Yes	45,316 bps	49.16%	100.00%	0.9780
UHGV-1351806	No	37,909 bps	48.96%	83.69%	0.9767