vOTU-048360

Overview

vOTU representative UHGV-0208506

No. of genomes 4

Genome length 36,865 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048360
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00476 › vGENUS-02975 › vSUBGEN-14463 › vOTU-048360
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208506
BioSample	NA
Genome length	36,865 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	59
CDS density	91.60%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208506_1	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0208506_1	PHROG	phrog_21498	NA	unknown function
UHGV-0208506_1	UniRef90	UniRef90_A0A7X2P836	ParB domain-containing protein	NA
UHGV-0208506_1	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0208506_1	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0208506_1	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0208506_1	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0208506_1	Structural annotation	PF02195, PF05869, MF_02015, TIGR00180, TIGR01712, COG5119	NA	NA
UHGV-0208506_2	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208506_2	UniRef90	UniRef90_A0A3D4EH89	HNH endonuclease	NA
UHGV-0208506_2	eggNOG-mapper	742738.HMPREF9460_00869	HNH endonuclease	NA
UHGV-0208506_2	AcrCatalog	cluster_19695	NA	NA
UHGV-0208506_2	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0208506_2	Structural annotation	PF05766	NA	NA
UHGV-0208506_3	eggNOG-mapper	742738.HMPREF9460_00868	Cysteine-rich KTR	NA
UHGV-0208506_3	Structural annotation	PF14205	NA	NA
UHGV-0208506_4	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0208506_4	eggNOG-mapper	742738.HMPREF9460_04063	NA	NA
UHGV-0208506_4	Structural annotation	PF01446	NA	NA
UHGV-0208506_10	Structural annotation	NF007271	NA	NA
UHGV-0208506_12	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0208506_12	PHROG	phrog_27290	NA	unknown function
UHGV-0208506_12	UniRef90	UniRef90_UPI001C029D7C	ParB N-terminal domain-containing protein	NA
UHGV-0208506_12	eggNOG-mapper	742738.HMPREF9460_00856	ParB-like nuclease domain	NA
UHGV-0208506_12	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0208506_12	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0208506_12	Structural annotation	PF12961, PF02195, MF_02015, MF_00684, TIGR04285, NF003443, COG1475, COG3097	NA	NA
UHGV-0208506_14	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0208506_14	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0208506_14	UniRef90	UniRef90_UPI000318E277	ParA family protein	NA
UHGV-0208506_14	eggNOG-mapper	1007096.BAGW01000033_gene1614	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-0208506_14	Pfam	PF13614	AAA domain	AAA_31
UHGV-0208506_14	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0208506_14	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0208506_16	KOfam	K17080	PHB1; prohibitin 1	NA
UHGV-0208506_16	PHROG	phrog_200	lipoprotein	other
UHGV-0208506_16	UniRef90	UniRef90_A0A1Y3TPZ8	Membrane protease	NA
UHGV-0208506_16	eggNOG-mapper	657322.FPR_23460	prohibitin homologues	NA
UHGV-0208506_16	Pfam	PF01145	SPFH domain / Band 7 family	Band_7
UHGV-0208506_16	COG	COG0330	Regulator of protease activity HflC, stomatin/prohibitin superfamily	NA
UHGV-0208506_16	Structural annotation	PF01145, MF_01562, NF008181, COG0330	NA	NA
UHGV-0208506_18	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0208506_18	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0208506_18	UniRef90	UniRef90_UPI00195856D7	AAA family ATPase	NA
UHGV-0208506_18	eggNOG-mapper	693746.OBV_27440	DnaB-like helicase N terminal domain	NA
UHGV-0208506_18	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0208506_18	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0208506_18	COG	COG0305	Replicative DNA helicase	NA
UHGV-0208506_18	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-0208506_20	PHROG	phrog_19658	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0208506_20	UniRef90	UniRef90_UPI000F7B2FCE	helix-turn-helix domain-containing protein	NA
UHGV-0208506_20	eggNOG-mapper	742738.HMPREF9460_00851	Helix-turn-helix domain	NA
UHGV-0208506_20	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0208506_20	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0208506_21	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0208506_21	Structural annotation	PF13560, MF_00535, NF041951, COG3655	NA	NA
UHGV-0208506_22	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0208506_22	UniRef90	UniRef90_A0A1Y3RCD0	DNA-binding protein	NA
UHGV-0208506_22	eggNOG-mapper	742738.HMPREF9460_00847	Helix-turn-helix XRE-family like proteins	NA
UHGV-0208506_22	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0208506_22	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0208506_22	Structural annotation	PF01381, MF_00535, NF040522, COG1476	NA	NA
UHGV-0208506_23	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0208506_23	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0208506_23	UniRef90	UniRef90_A0A807ZQ14	XRE family transcriptional regulator	NA
UHGV-0208506_23	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208506_23	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0208506_24	UniRef90	UniRef90_UPI001E54DE4F	helix-turn-helix domain-containing protein	NA
UHGV-0208506_24	eggNOG-mapper	1226322.HMPREF1545_00148	Transcriptional	NA
UHGV-0208506_24	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208506_24	Structural annotation	PF08667, NF041951, COG3655	NA	NA
UHGV-0208506_25	PHROG	phrog_10292	NA	unknown function
UHGV-0208506_25	UniRef90	UniRef90_UPI0009DE3FE8	TM2 domain-containing protein	NA
UHGV-0208506_25	eggNOG-mapper	665956.HMPREF1032_00562	TM2 domain	NA
UHGV-0208506_25	Pfam	PF08797	HIRAN domain	HIRAN
UHGV-0208506_25	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0208506_25	Pfam	PF05154	TM2 domain	TM2
UHGV-0208506_25	COG	COG2314	NA	NA
UHGV-0208506_26	UniRef90	UniRef90_A0A8D9UHA6	Helix-turn-helix XRE-family like protein	NA
UHGV-0208506_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208506_26	Structural annotation	PF12844, MF_00535, TIGR03070, COG1396	NA	NA
UHGV-0208506_27	KOfam	K14059	int; integrase	NA
UHGV-0208506_27	PHROG	phrog_1	integrase	integration and excision
UHGV-0208506_27	UniRef90	UniRef90_U2QJL8	Site-specific recombinase, phage integrase family	NA
UHGV-0208506_27	eggNOG-mapper	1226322.HMPREF1545_00144	Belongs to the 'phage' integrase family	NA
UHGV-0208506_27	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208506_27	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0208506_27	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0208506_28	UniRef90	UniRef90_A0A843GWV6	Rubrerythrin domain-containing protein	NA
UHGV-0208506_29	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0208506_30	PHROG	phrog_16490	NA	unknown function
UHGV-0208506_30	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0208506_31	PHROG	phrog_22984	NA	unknown function
UHGV-0208506_33	UniRef90	UniRef90_A0A8D9PDQ3	ECF sigma factor	NA
UHGV-0208506_33	Structural annotation	PF04545, MF_00674, NF008895, COG1342	NA	NA
UHGV-0208506_34	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0208506_34	PHROG	phrog_435	endolysin	lysis
UHGV-0208506_34	UniRef90	UniRef90_A0A351MWN4	SPOR domain-containing protein	NA
UHGV-0208506_34	eggNOG-mapper	697281.Mahau_0053	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0208506_34	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0208506_34	Pfam	PF05036	SPOR domain	SPOR
UHGV-0208506_34	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208506_34	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0208506_35	PHROG	phrog_881	holin	lysis
UHGV-0208506_35	UniRef90	UniRef90_A0A8D9PDR9	Holin	NA
UHGV-0208506_35	eggNOG-mapper	1321782.HMPREF1986_02282	Putative phage holin Dp-1	NA
UHGV-0208506_35	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0208506_35	Structural annotation	PF16938	NA	NA
UHGV-0208506_36	Structural annotation	PF05543, NF033920	NA	NA
UHGV-0208506_37	PHROG	phrog_4105	NA	unknown function
UHGV-0208506_37	UniRef90	UniRef90_A0A8D9UHA9	Holin protein	NA
UHGV-0208506_37	eggNOG-mapper	411460.RUMTOR_01326	NA	NA
UHGV-0208506_38	PHROG	phrog_18593	NA	unknown function
UHGV-0208506_38	UniRef90	UniRef90_R6RWR8	Carbohydrate binding domain protein	NA
UHGV-0208506_38	eggNOG-mapper	411460.RUMTOR_02099	NA	NA
UHGV-0208506_38	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0208506_38	Structural annotation	PF14600	NA	NA
UHGV-0208506_39	eggNOG-mapper	1291050.JAGE01000001_gene436	NA	NA
UHGV-0208506_40	Pfam	PF21722	Glycine-rich domain	Gly_rich_2
UHGV-0208506_40	Structural annotation	PF21722	NA	NA
UHGV-0208506_41	PHROG	phrog_3904	tail fiber protein	tail
UHGV-0208506_41	eggNOG-mapper	693979.Bache_2190	NA	NA
UHGV-0208506_41	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-0208506_43	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-0208506_43	Structural annotation	COG4379	NA	NA
UHGV-0208506_44	eggNOG-mapper	1235797.C816_04180	NA	NA
UHGV-0208506_44	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-0208506_45	PHROG	phrog_1194	NA	unknown function
UHGV-0208506_45	eggNOG-mapper	702450.CUW_0546	NA	NA
UHGV-0208506_45	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-0208506_46	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0208506_46	UniRef90	UniRef90_A0A1G9R278	Phage-related protein	NA
UHGV-0208506_46	eggNOG-mapper	1120998.AUFC01000013_gene2948	Phage tail tape measure protein TP901	NA
UHGV-0208506_46	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0208506_48	PHROG	phrog_34587	NA	unknown function
UHGV-0208506_48	eggNOG-mapper	324057.Pjdr2_1550	NA	NA
UHGV-0208506_48	Structural annotation	PF11836	NA	NA
UHGV-0208506_49	PHROG	phrog_158	major tail protein	tail
UHGV-0208506_49	UniRef90	UniRef90_A0A831TIM5	Histidine kinase	NA
UHGV-0208506_49	eggNOG-mapper	1536773.R70331_25690	Phage tail tube protein	NA
UHGV-0208506_49	Pfam	PF16461	Lambda phage tail tube protein, TTP	Phage_TTP_12
UHGV-0208506_49	Structural annotation	PF16461, TIGR02241, COG5437	NA	NA
UHGV-0208506_50	Structural annotation	PF12691	NA	NA
UHGV-0208506_51	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0208506_51	UniRef90	UniRef90_UPI000476ED54	HK97 gp10 family phage protein	NA
UHGV-0208506_51	eggNOG-mapper	1122919.KB905559_gene1352	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0208506_52	PHROG	phrog_25	head closure Hc1	connector
UHGV-0208506_52	UniRef90	UniRef90_E6KYB5	Phage head-tail adaptor	NA
UHGV-0208506_52	eggNOG-mapper	634176.NT05HA_0498	Phage head-tail joining protein	NA
UHGV-0208506_52	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0208506_52	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0208506_52	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0208506_52	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0208506_53	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0208506_53	UniRef90	UniRef90_UPI000F63D7A0	head-tail connector protein	NA
UHGV-0208506_53	eggNOG-mapper	1348908.KI518589_gene2534	Phage gp6-like head-tail connector protein	NA
UHGV-0208506_53	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0208506_53	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0208506_53	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0208506_54	PHROG	phrog_10	major head protein	head and packaging
UHGV-0208506_54	UniRef90	UniRef90_A0A3D4EJL4	Phage major capsid protein	NA
UHGV-0208506_54	eggNOG-mapper	315730.BcerKBAB4_3428	Phage capsid family	NA
UHGV-0208506_54	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0208506_54	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0208506_54	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0208506_54	Structural annotation	PF05065, PF14182, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0208506_55	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0208506_55	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0208506_55	UniRef90	UniRef90_A0A3D4EJM3	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0208506_55	eggNOG-mapper	649639.Bcell_2731	Serine dehydrogenase proteinase	NA
UHGV-0208506_55	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0208506_55	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0208506_55	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0208506_56	PHROG	phrog_12	portal protein	head and packaging
UHGV-0208506_56	UniRef90	UniRef90_A0A3D4EI33	Phage portal protein	NA
UHGV-0208506_56	eggNOG-mapper	1120971.AUCA01000066_gene593	Phage portal protein	NA
UHGV-0208506_56	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0208506_56	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0208506_56	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0208506_56	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0208506_58	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0208506_58	UniRef90	UniRef90_A0A3D4EH51	Terminase large subunit	NA
UHGV-0208506_58	eggNOG-mapper	693746.OBV_20000	Phage terminase-like protein large subunit	NA
UHGV-0208506_58	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0208506_58	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0208506_58	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0208506_58	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0208506_59	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0208506_59	UniRef90	UniRef90_G4L1I0	Putative terminase small subunit	NA
UHGV-0208506_59	eggNOG-mapper	693746.OBV_19990	Phage terminase, small subunit	NA
UHGV-0208506_59	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0208506_59	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0208506_59	COG	COG3747	Phage terminase, small subunit	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208506	Yes	36,865 bps	62.12%	100.00%	0.9803
UHGV-0178308	No	37,445 bps	62.05%	99.90%	0.9786
UHGV-0180774	No	36,906 bps	62.08%	99.90%	0.9804
UHGV-0174417	No	26,154 bps	62.35%	74.55%	0.9799