vOTU-048386

Overview

vOTU representative UHGV-0208715

No. of genomes 1

Genome length 38,181 bps

Completeness 100.00% (complete)

Host Enterococcus D gallinarum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048386
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vSUBFAM-02696 › vGENUS-13910 › vSUBGEN-22822 › vOTU-048386
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Enterococcaceae › Enterococcus D › Enterococcus D gallinarum
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208715
BioSample	SAMN11031452
Genome length	38,181 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	56
CDS density	93.85%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208715_1	PHROG	phrog_8913	minor head protein	head and packaging
UHGV-0208715_1	UniRef90	UniRef90_A0A366U6K4	BppU_N domain-containing protein (Fragment)	NA
UHGV-0208715_1	eggNOG-mapper	595460.RRSWK_02491	NA	NA
UHGV-0208715_1	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0208715_4	PHROG	phrog_608	holin	lysis
UHGV-0208715_4	UniRef90	UniRef90_A0A5F0V7G1	Holin	NA
UHGV-0208715_4	eggNOG-mapper	767817.Desgi_4695	Bacteriophage holin of superfamily 6 (Holin_LLH)	NA
UHGV-0208715_4	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-0208715_4	Structural annotation	PF09682, TIGR01673	NA	NA
UHGV-0208715_5	UniRef90	UniRef90_UPI000F87D180	NA	NA
UHGV-0208715_5	Pfam	PF19385	NA	DUF5960
UHGV-0208715_6	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0208715_6	PHROG	phrog_435	endolysin	lysis
UHGV-0208715_6	UniRef90	UniRef90_A0A7T4KR46	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208715_6	eggNOG-mapper	1158610.UC3_02332	Ami_2	NA
UHGV-0208715_6	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0208715_6	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0208715_6	Structural annotation	PF01520, PF15591, MF_00562, TIGR02883, NF033202, COG0860	NA	NA
UHGV-0208715_7	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0208715_7	PHROG	phrog_95	integrase	integration and excision
UHGV-0208715_7	UniRef90	UniRef90_UPI0013592452	recombinase family protein	NA
UHGV-0208715_7	eggNOG-mapper	1234679.BN424_2665	L COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-0208715_7	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0208715_7	Pfam	PF07508	Recombinase	Recombinase
UHGV-0208715_7	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0208715_7	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0208715_7	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0208715_9	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0208715_9	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0208715_9	UniRef90	UniRef90_UPI0011CC92BE	XRE family transcriptional regulator	NA
UHGV-0208715_9	eggNOG-mapper	1140001.I571_01121	Peptidase S24-like	NA
UHGV-0208715_9	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208715_9	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0208715_9	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208715_9	Structural annotation	PF00717, PF01381, MF_00015, NF007621, NF041951, COG2932	NA	NA
UHGV-0208715_10	UniRef90	UniRef90_UPI000825F94A	phage repressor protein	NA
UHGV-0208715_10	eggNOG-mapper	1140001.I571_01122	NA	NA
UHGV-0208715_10	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-0208715_12	PHROG	phrog_8594	NA	unknown function
UHGV-0208715_12	eggNOG-mapper	701521.PECL_592	NA	NA
UHGV-0208715_13	PHROG	phrog_5105	NA	unknown function
UHGV-0208715_16	PHROG	phrog_11542	NA	unknown function
UHGV-0208715_16	eggNOG-mapper	768486.EHR_09455	NA	NA
UHGV-0208715_17	PHROG	phrog_5100	NA	unknown function
UHGV-0208715_18	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0208715_18	UniRef90	UniRef90_UPI00026C8336	siphovirus Gp157 family protein	NA
UHGV-0208715_18	eggNOG-mapper	698737.SLGD_02278	Siphovirus Gp157	NA
UHGV-0208715_18	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0208715_18	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0208715_19	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0208715_19	UniRef90	UniRef90_A0A7X3A038	AAA family ATPase	NA
UHGV-0208715_19	eggNOG-mapper	365659.smi_0421	AAA domain	NA
UHGV-0208715_19	Pfam	PF13479	AAA domain	AAA_24
UHGV-0208715_19	NCBIFam	TIGR01618.1	phage nucleotide-binding protein	NA
UHGV-0208715_19	Structural annotation	PF13479, MF_00350, TIGR01618, COG1066	NA	NA
UHGV-0208715_20	KOfam	K19789	radD; DNA repair protein RadD	NA
UHGV-0208715_20	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0208715_20	UniRef90	UniRef90_A0A7X3A062	Helicase	NA
UHGV-0208715_20	eggNOG-mapper	1410670.JHXF01000015_gene2270	helicase	NA
UHGV-0208715_20	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0208715_20	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0208715_20	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0208715_20	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0208715_20	Structural annotation	PF04851, PF00271, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-0208715_22	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0208715_22	UniRef90	UniRef90_UPI0018AB2010	NA	NA
UHGV-0208715_22	eggNOG-mapper	985762.SAGN_11332	NA	NA
UHGV-0208715_22	AcrCatalog	cluster_1061	NA	NA
UHGV-0208715_22	Pfam	PF05037	NA	DUF669
UHGV-0208715_22	Structural annotation	PF05037, MF_00720, NF004948, COG2965	NA	NA
UHGV-0208715_23	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0208715_23	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0208715_23	UniRef90	UniRef90_A0A7X3A034	DNA primase	NA
UHGV-0208715_23	eggNOG-mapper	1302286.BAOT01000008_gene592	Phage plasmid primase, P4	NA
UHGV-0208715_23	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0208715_23	Pfam	PF19263	NA	DUF5906
UHGV-0208715_23	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0208715_23	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0208715_23	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0208715_23	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF011296, COG3378, COG4983	NA	NA
UHGV-0208715_24	PHROG	phrog_5702	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0208715_24	UniRef90	UniRef90_A0A7X3A024	VRR-NUC domain-containing protein	NA
UHGV-0208715_24	eggNOG-mapper	1567453.A0A0A1ENT6_9CAUD	hydrolase activity, acting on ester bonds	NA
UHGV-0208715_24	Structural annotation	PF01870, MF_00130, NF002581, COG1591	NA	NA
UHGV-0208715_26	PHROG	phrog_34095	NA	unknown function
UHGV-0208715_26	UniRef90	UniRef90_UPI0012B4AC17	NA	NA
UHGV-0208715_26	eggNOG-mapper	169963.lmo2315	NA	NA
UHGV-0208715_26	Pfam	PF07852	NA	DUF1642
UHGV-0208715_26	Structural annotation	PF07852	NA	NA
UHGV-0208715_27	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0208715_27	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0208715_27	UniRef90	UniRef90_A0A7Z0M1S7	Single-stranded DNA-binding protein	NA
UHGV-0208715_27	eggNOG-mapper	536233.CLO_0510	Single-strand binding protein family	NA
UHGV-0208715_27	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0208715_27	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0208715_27	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0208715_27	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0208715_27	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0208715_29	PHROG	phrog_121	NA	unknown function
UHGV-0208715_29	UniRef90	UniRef90_UPI001F0409B1	NA	NA
UHGV-0208715_29	eggNOG-mapper	1300150.EMQU_2281	NA	NA
UHGV-0208715_29	Pfam	PF07852	NA	DUF1642
UHGV-0208715_29	Structural annotation	PF07852	NA	NA
UHGV-0208715_30	PHROG	phrog_3302	NA	unknown function
UHGV-0208715_33	PHROG	phrog_1150	NA	unknown function
UHGV-0208715_33	UniRef90	UniRef90_UPI000DE8D13B	Lar family restriction alleviation protein	NA
UHGV-0208715_35	UniRef90	UniRef90_C9A186	Predicted protein	NA
UHGV-0208715_36	UniRef90	UniRef90_C9A187	Predicted protein	NA
UHGV-0208715_38	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0208715_38	UniRef90	UniRef90_A0A418IPP1	Transcriptional regulator	NA
UHGV-0208715_38	eggNOG-mapper	1231377.C426_2205	Transcriptional regulator, RinA family	NA
UHGV-0208715_38	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-0208715_38	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-0208715_39	PHROG	phrog_704	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208715_39	UniRef90	UniRef90_UPI001E3C1255	helix-turn-helix domain-containing protein	NA
UHGV-0208715_39	eggNOG-mapper	762051.LKI_09650	NA	NA
UHGV-0208715_39	Structural annotation	PF12850, MF_00905, NF008359, COG2908	NA	NA
UHGV-0208715_40	Structural annotation	PF18789	NA	NA
UHGV-0208715_41	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208715_41	UniRef90	UniRef90_A0A366U757	HNH domain-containing protein	NA
UHGV-0208715_41	eggNOG-mapper	543734.LCABL_11060	HNH endonuclease	NA
UHGV-0208715_41	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0208715_41	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0208715_42	PHROG	phrog_1066	NA	unknown function
UHGV-0208715_42	eggNOG-mapper	1111134.HMPREF1253_0387	NA	NA
UHGV-0208715_42	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-0208715_43	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0208715_43	UniRef90	UniRef90_UPI001E56F8CE	terminase large subunit	NA
UHGV-0208715_43	eggNOG-mapper	543734.LCABL_11080	overlaps another CDS with the same product name	NA
UHGV-0208715_43	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0208715_43	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0208715_43	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0208715_43	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0208715_44	PHROG	phrog_12	portal protein	head and packaging
UHGV-0208715_44	UniRef90	UniRef90_A0A366U7B2	HK97 family phage portal protein	NA
UHGV-0208715_44	eggNOG-mapper	1211814.CAPG01000074_gene3456	Phage portal protein	NA
UHGV-0208715_44	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0208715_44	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0208715_44	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0208715_45	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0208715_45	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0208715_45	UniRef90	UniRef90_A0A366U5Q0	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0208715_45	eggNOG-mapper	1154860.SAG0136_08085	Belongs to the peptidase S14 family	NA
UHGV-0208715_45	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0208715_45	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0208715_45	Structural annotation	PF00574, MF_00444, NF011091, COG0740	NA	NA
UHGV-0208715_46	PHROG	phrog_10	major head protein	head and packaging
UHGV-0208715_46	UniRef90	UniRef90_A0A6I4XZ09	Phage major capsid protein	NA
UHGV-0208715_46	eggNOG-mapper	1235755.ANAM01000006_gene2375	Phage capsid family	NA
UHGV-0208715_46	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0208715_46	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0208715_46	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0208715_46	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0208715_47	UniRef90	UniRef90_C8P8Y3	HeH domain-containing protein	NA
UHGV-0208715_47	eggNOG-mapper	930946.AEOP01000019_gene939	Belongs to the bacterial ribosomal protein bS16 family	NA
UHGV-0208715_47	COG	COG0228	Ribosomal protein S16	NA
UHGV-0208715_48	PHROG	phrog_4609	NA	unknown function
UHGV-0208715_48	UniRef90	UniRef90_UPI001D0AC32C	head-tail connector protein	NA
UHGV-0208715_48	eggNOG-mapper	543734.LCABL_09870	NA	NA
UHGV-0208715_48	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0208715_48	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0208715_49	PHROG	phrog_4014	head-tail adaptor	connector
UHGV-0208715_49	UniRef90	UniRef90_UPI001C44927B	head-tail adaptor protein	NA
UHGV-0208715_49	eggNOG-mapper	1158604.I591_00531	Phage head-tail joining protein	NA
UHGV-0208715_49	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0208715_49	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0208715_50	PHROG	phrog_78	tail terminator	connector
UHGV-0208715_50	UniRef90	UniRef90_A0A366U5N9	NA	NA
UHGV-0208715_50	eggNOG-mapper	565664.EFXG_02656	NA	NA
UHGV-0208715_50	Structural annotation	PF20765	NA	NA
UHGV-0208715_51	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0208715_51	UniRef90	UniRef90_A0A366U6Q2	HK97 gp10 family phage protein	NA
UHGV-0208715_51	eggNOG-mapper	565664.EFXG_02655	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0208715_51	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0208715_51	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0208715_51	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-0208715_52	PHROG	phrog_11502	tail protein	tail
UHGV-0208715_52	UniRef90	UniRef90_A0A366U749	Phage major tail protein	NA
UHGV-0208715_52	eggNOG-mapper	1158614.I592_02328	NA	NA
UHGV-0208715_52	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0208715_52	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0208715_53	PHROG	phrog_4888	tail assembly chaperone	tail
UHGV-0208715_53	UniRef90	UniRef90_W7D9N8	NA	NA
UHGV-0208715_53	eggNOG-mapper	1158614.I592_02327	NA	NA
UHGV-0208715_53	Structural annotation	PF11836	NA	NA
UHGV-0208715_54	PHROG	phrog_991	tail length tape measure protein	tail
UHGV-0208715_54	UniRef90	UniRef90_A0A7X3A056	Phage tail tape measure protein	NA
UHGV-0208715_54	eggNOG-mapper	565653.EGBG_02364	Phage-related minor tail protein	NA
UHGV-0208715_54	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0208715_54	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0208715_54	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0208715_54	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0208715_55	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0208715_55	UniRef90	UniRef90_UPI0013799667	phage tail protein	NA
UHGV-0208715_55	eggNOG-mapper	1158604.I591_00537	phage tail	NA
UHGV-0208715_55	COG	COG4722	Phage-related protein YomH	NA
UHGV-0208715_55	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0208715_56	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0208715_56	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0208715_56	UniRef90	UniRef90_A0A366U5P2	Peptidase_M23 domain-containing protein	NA
UHGV-0208715_56	eggNOG-mapper	226185.EF_2811	Prophage endopeptidase tail	NA
UHGV-0208715_56	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0208715_56	Pfam	PF13702	Lysozyme-like	Lysozyme_like
UHGV-0208715_56	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0208715_56	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0208715_56	COG	COG4926	Phage-related protein	NA
UHGV-0208715_56	Structural annotation	PF14594, PF01551, PF18013, TIGR01665, NF040883, COG4926, COG0739	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208715	Yes	38,181 bps	38.52%	100.00%	0.9687