vOTU-048392

Overview

vOTU representative UHGV-0208804

No. of genomes 3

Genome length 37,228 bps

Completeness 100.00% (complete)

Host Coprococcus

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048392
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00178 › vGENUS-00486 › vSUBGEN-31725 › vOTU-048392
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Coprococcus
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208804
BioSample	SAMN00039759
Genome length	37,228 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	53
CDS density	94.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208804_2	PHROG	phrog_8684	NA	unknown function
UHGV-0208804_2	UniRef90	UniRef90_UPI00156EBF78	YopX family protein	NA
UHGV-0208804_2	eggNOG-mapper	457412.RSAG_01162	YopX protein	NA
UHGV-0208804_2	Pfam	PF09643	YopX protein	YopX
UHGV-0208804_2	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0208804_2	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0208804_6	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0208804_6	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0208804_6	UniRef90	UniRef90_A0A3A6J7Y8	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0208804_6	eggNOG-mapper	1235800.C819_02255	C-5 cytosine-specific DNA methylase	NA
UHGV-0208804_6	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0208804_6	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0208804_6	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0208804_6	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0208804_7	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0208804_7	UniRef90	UniRef90_A0A2H4JC51	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	NA
UHGV-0208804_7	eggNOG-mapper	1304866.K413DRAFT_0821	NA	NA
UHGV-0208804_7	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0208804_7	Structural annotation	PF01507, MF_00064, TIGR00434, COG0175	NA	NA
UHGV-0208804_8	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0208804_8	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0208804_8	UniRef90	UniRef90_A0A173W8R8	Modification methylase MboII	NA
UHGV-0208804_8	eggNOG-mapper	1298920.KI911353_gene2709	DEAD-like helicases superfamily	NA
UHGV-0208804_8	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0208804_8	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0208804_8	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0208804_8	Structural annotation	PF01555, PF16203, PF04851, MF_01821, MF_00472, NF041790, NF008572, COG0553, COG0863	NA	NA
UHGV-0208804_11	eggNOG-mapper	1120998.AUFC01000030_gene2222	NA	NA
UHGV-0208804_12	PHROG	phrog_9804	NA	unknown function
UHGV-0208804_12	UniRef90	UniRef90_A0A3R6Y4B9	Inhibitor_G39P domain-containing protein	NA
UHGV-0208804_12	eggNOG-mapper	585394.RHOM_14005	Loader and inhibitor of phage G40P	NA
UHGV-0208804_12	AcrCatalog	cluster_137185	NA	NA
UHGV-0208804_12	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0208804_12	Structural annotation	PF11417	NA	NA
UHGV-0208804_14	PHROG	phrog_10469	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0208804_14	UniRef90	UniRef90_A0A417W6N9	Phage_rep_org_N domain-containing protein	NA
UHGV-0208804_14	eggNOG-mapper	411470.RUMGNA_02197	phage replisome	NA
UHGV-0208804_14	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0208804_14	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0208804_14	Structural annotation	PF09681, TIGR01714, COG3388	NA	NA
UHGV-0208804_15	eggNOG-mapper	1203606.HMPREF1526_01684	NA	NA
UHGV-0208804_16	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0208804_16	UniRef90	UniRef90_A0A417W6H7	NA	NA
UHGV-0208804_16	eggNOG-mapper	1236514.BAKL01000051_gene3708	NA	NA
UHGV-0208804_16	Pfam	PF06356	NA	DUF1064
UHGV-0208804_16	Structural annotation	PF06356	NA	NA
UHGV-0208804_17	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0208804_17	UniRef90	UniRef90_UPI00156DE752	phage recombination protein Bet	NA
UHGV-0208804_17	eggNOG-mapper	397290.C810_01467	Phage recombination protein Bet	NA
UHGV-0208804_17	Pfam	PF03837	RecT family	RecT
UHGV-0208804_17	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-0208804_17	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0208804_17	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0208804_19	PHROG	phrog_674	NA	unknown function
UHGV-0208804_19	UniRef90	UniRef90_UPI00156FBAC2	NA	NA
UHGV-0208804_19	eggNOG-mapper	742765.HMPREF9457_02106	NA	NA
UHGV-0208804_19	Pfam	PF07083	NA	DUF1351
UHGV-0208804_19	Structural annotation	PF07083	NA	NA
UHGV-0208804_20	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208804_20	UniRef90	UniRef90_A0A3R6XK93	Recombinase	NA
UHGV-0208804_20	eggNOG-mapper	1095750.HMPREF9970_1677	YqaJ viral recombinase family	NA
UHGV-0208804_20	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0208804_20	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0208804_20	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0208804_20	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0208804_22	UniRef90	UniRef90_R5VU56	HTH_11 domain-containing protein	NA
UHGV-0208804_22	Structural annotation	PF20063	NA	NA
UHGV-0208804_25	PHROG	phrog_15412	NA	unknown function
UHGV-0208804_25	UniRef90	UniRef90_A7VIB9	UPF0145 protein CLOL250_02667	NA
UHGV-0208804_25	eggNOG-mapper	411489.CLOL250_02667	Belongs to the UPF0145 family	NA
UHGV-0208804_25	Pfam	PF01906	Putative heavy-metal-binding	YbjQ_1
UHGV-0208804_25	COG	COG0393	NA	NA
UHGV-0208804_25	HAMAP	MF_00338	UPF0145 protein YbjQ [ybjQ]	NA
UHGV-0208804_26	KOfam	K13023	CPN2; carboxypeptidase N regulatory subunit	NA
UHGV-0208804_26	PHROG	phrog_35892	NA	unknown function
UHGV-0208804_26	UniRef90	UniRef90_A0A373ZHW1	Leucine-rich repeat domain-containing protein	NA
UHGV-0208804_26	eggNOG-mapper	411489.CLOL250_02668	COG COG3291 FOG PKD repeat	NA
UHGV-0208804_26	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0208804_26	Pfam	PF13855	Leucine rich repeat	LRR_8
UHGV-0208804_26	COG	COG5492	NA	NA
UHGV-0208804_28	KOfam	K22409	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0208804_28	PHROG	phrog_9589	endolysin	lysis
UHGV-0208804_28	UniRef90	UniRef90_UPI001571512E	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0208804_28	eggNOG-mapper	97139.C824_00684	lysozyme activity	NA
UHGV-0208804_28	Pfam	PF05257	CHAP domain	CHAP
UHGV-0208804_28	Pfam	PF01476	LysM domain	LysM
UHGV-0208804_28	COG	COG1388	LysM repeat	NA
UHGV-0208804_28	Structural annotation	PF01476, PF10030, MF_02014, TIGR02594, NF004974, COG1388, COG4322	NA	NA
UHGV-0208804_29	PHROG	phrog_199	holin	lysis
UHGV-0208804_29	UniRef90	UniRef90_A0A417W6L6	Holin	NA
UHGV-0208804_29	eggNOG-mapper	742740.HMPREF9474_02333	Bacteriophage holin family	NA
UHGV-0208804_29	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0208804_29	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0208804_29	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0208804_29	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0208804_30	PHROG	phrog_9994	NA	unknown function
UHGV-0208804_30	eggNOG-mapper	1280698.AUJS01000007_gene1050	NA	NA
UHGV-0208804_30	Structural annotation	PF20747	NA	NA
UHGV-0208804_31	PHROG	phrog_538	minor tail protein	tail
UHGV-0208804_31	UniRef90	UniRef90_A0A1C5PP83	Phage-related holin (Lysis protein)	NA
UHGV-0208804_31	eggNOG-mapper	1256908.HMPREF0373_00466	NA	NA
UHGV-0208804_31	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0208804_31	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0208804_32	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0208804_32	UniRef90	UniRef90_A0A414P9H2	Phage tail protein	NA
UHGV-0208804_32	eggNOG-mapper	1256908.HMPREF0373_00467	NA	NA
UHGV-0208804_32	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0208804_33	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0208804_33	eggNOG-mapper	1123312.KB904569_gene357	Phage tail tape measure protein TP901	NA
UHGV-0208804_33	COG	COG5412	Phage-related protein	NA
UHGV-0208804_33	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0208804_34	PHROG	phrog_1294	peptide methionine sulfoxide reductase	other
UHGV-0208804_35	PHROG	phrog_1021	NA	unknown function
UHGV-0208804_35	eggNOG-mapper	1256908.HMPREF0373_00470	NA	NA
UHGV-0208804_36	PHROG	phrog_885	major tail protein	tail
UHGV-0208804_36	eggNOG-mapper	1256908.HMPREF0373_00471	NA	NA
UHGV-0208804_36	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0208804_37	PHROG	phrog_957	head protein	head and packaging
UHGV-0208804_37	eggNOG-mapper	1235800.C819_02229	NA	NA
UHGV-0208804_37	Structural annotation	PF12691	NA	NA
UHGV-0208804_38	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0208804_38	UniRef90	UniRef90_A0A416I9Q2	HK97 gp10 family phage protein	NA
UHGV-0208804_38	eggNOG-mapper	1256908.HMPREF0373_00473	NA	NA
UHGV-0208804_38	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0208804_39	PHROG	phrog_1059	head-tail adaptor	connector
UHGV-0208804_39	UniRef90	UniRef90_A0A416AFR5	Head-tail adaptor protein	NA
UHGV-0208804_39	eggNOG-mapper	1256908.HMPREF0373_00474	NA	NA
UHGV-0208804_39	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0208804_40	PHROG	phrog_1236	head protein	head and packaging
UHGV-0208804_40	eggNOG-mapper	1256908.HMPREF0373_00475	NA	NA
UHGV-0208804_40	Structural annotation	PF05135	NA	NA
UHGV-0208804_42	PHROG	phrog_212	major head protein	head and packaging
UHGV-0208804_42	UniRef90	UniRef90_A0A3A6J9J0	Phage capsid protein	NA
UHGV-0208804_42	eggNOG-mapper	1235800.C819_02234	NA	NA
UHGV-0208804_42	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0208804_43	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0208804_43	UniRef90	UniRef90_UPI000E5C7AD7	phage scaffolding protein	NA
UHGV-0208804_43	eggNOG-mapper	1256908.HMPREF0373_00477	Phage minor structural protein GP20	NA
UHGV-0208804_43	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0208804_43	Structural annotation	PF06810	NA	NA
UHGV-0208804_45	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0208804_45	UniRef90	UniRef90_A0A3R6X4N0	Phage_Mu_F domain-containing protein	NA
UHGV-0208804_45	eggNOG-mapper	1256908.HMPREF0373_00484	Phage Mu protein F like protein	NA
UHGV-0208804_45	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0208804_45	COG	COG2369	NA	NA
UHGV-0208804_45	Structural annotation	PF04233, PF15188, PF04002, TIGR01641, COG2369	NA	NA
UHGV-0208804_47	eggNOG-mapper	411462.DORLON_00771	NA	NA
UHGV-0208804_47	Structural annotation	PF10651	NA	NA
UHGV-0208804_48	PHROG	phrog_64	portal protein	head and packaging
UHGV-0208804_48	UniRef90	UniRef90_A0A3R6UWR4	Phage portal protein	NA
UHGV-0208804_48	eggNOG-mapper	1256908.HMPREF0373_00485	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0208804_48	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0208804_48	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0208804_49	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0208804_49	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0208804_49	UniRef90	UniRef90_A0A822LI54	Terminase_3 domain-containing protein	NA
UHGV-0208804_49	eggNOG-mapper	1256908.HMPREF0373_00486	Phage terminase, large subunit, PBSX family	NA
UHGV-0208804_49	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0208804_49	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0208804_49	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0208804_49	COG	COG1783	Phage terminase large subunit	NA
UHGV-0208804_49	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0208804_50	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0208804_50	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0208804_50	UniRef90	UniRef90_A0A416IA81	Terminase small subunit	NA
UHGV-0208804_50	eggNOG-mapper	445971.ANASTE_00710	Terminase small subunit	NA
UHGV-0208804_50	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0208804_50	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0208804_50	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0208804_52	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0208804_52	eggNOG-mapper	97138.C820_00221	sigma factor activity	NA
UHGV-0208804_52	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0208804_52	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0208804_53	PHROG	phrog_17690	NA	unknown function
UHGV-0208804_53	UniRef90	UniRef90_A0A6L5XWF4	3-dehydroquinate synthase	NA
UHGV-0208804_53	eggNOG-mapper	33035.JPJF01000107_gene432	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208804	Yes	37,228 bps	41.31%	100.00%	0.9811
UHGV-0122697	No	36,035 bps	41.05%	96.66%	0.9803
UHGV-1724444	No	10,417 bps	41.52%	27.66%	0.9819