vOTU-048415

Overview

vOTU representative UHGV-0208925

No. of genomes 2

Genome length 43,644 bps

Completeness 100.00% (complete)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048415
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00005 › vGENUS-08522 › vSUBGEN-08552 › vOTU-048415
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208925
BioSample	SAMN09781790
Genome length	43,644 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	74
CDS density	91.00%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208925_1	PHROG	phrog_15946	NA	unknown function
UHGV-0208925_1	eggNOG-mapper	1041147.AUFB01000014_gene330	NA	NA
UHGV-0208925_2	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0208925_2	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0208925_2	UniRef90	UniRef90_A0A810PZI0	HTH cro/C1-type domain-containing protein	NA
UHGV-0208925_2	eggNOG-mapper	1203606.HMPREF1526_00248	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0208925_2	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0208925_2	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0208925_2	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0208925_3	Structural annotation	PF12844, MF_00535, NF041951, COG3655	NA	NA
UHGV-0208925_4	eggNOG-mapper	411902.CLOBOL_02557	NA	NA
UHGV-0208925_5	UniRef90	UniRef90_A0A354UMM3	HTH cro/C1-type domain-containing protein	NA
UHGV-0208925_5	eggNOG-mapper	537007.BLAHAN_06565	sequence-specific DNA binding	NA
UHGV-0208925_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208925_5	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0208925_5	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-0208925_6	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0208925_6	PHROG	phrog_95	integrase	integration and excision
UHGV-0208925_6	UniRef90	UniRef90_A0A3A9I9T1	Recombinase family protein	NA
UHGV-0208925_6	eggNOG-mapper	903814.ELI_4654	Resolvase, N terminal domain	NA
UHGV-0208925_6	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0208925_6	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0208925_6	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0208925_6	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-0208925_7	eggNOG-mapper	1232443.BAIA02000078_gene6	NA	NA
UHGV-0208925_8	UniRef90	UniRef90_A0A843GWV6	Rubrerythrin domain-containing protein	NA
UHGV-0208925_10	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0208925_13	eggNOG-mapper	169963.lmo2273	NA	NA
UHGV-0208925_13	AcrCatalog	cluster_2194	NA	NA
UHGV-0208925_14	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0208925_14	UniRef90	UniRef90_A0A096AZ46	HTH cro/C1-type domain-containing protein	NA
UHGV-0208925_14	eggNOG-mapper	742738.HMPREF9460_04059	Helix-turn-helix XRE-family like proteins	NA
UHGV-0208925_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208925_14	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208925_14	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0208925_15	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208925_15	UniRef90	UniRef90_A0A351TR50	Transcriptional regulator	NA
UHGV-0208925_15	eggNOG-mapper	478749.BRYFOR_06178	AP2 domain protein	NA
UHGV-0208925_15	Structural annotation	PF17375	NA	NA
UHGV-0208925_16	KOfam	K17733	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	NA
UHGV-0208925_16	PHROG	phrog_6523	endolysin	lysis
UHGV-0208925_16	UniRef90	UniRef90_R5RXG6	Serine-type D-Ala-D-Ala carboxypeptidase	NA
UHGV-0208925_16	eggNOG-mapper	1519439.JPJG01000023_gene536	D-alanyl-D-alanine carboxypeptidase	NA
UHGV-0208925_16	Pfam	PF13539	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
UHGV-0208925_16	COG	COG1876	LD-carboxypeptidase LdcB, LAS superfamily	NA
UHGV-0208925_16	Structural annotation	PF02557, MF_01924, NF000380, COG1876	NA	NA
UHGV-0208925_17	PHROG	phrog_13256	NA	unknown function
UHGV-0208925_17	eggNOG-mapper	1226322.HMPREF1545_00166	NA	NA
UHGV-0208925_20	PHROG	phrog_937	hemolysin	other
UHGV-0208925_20	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-0208925_23	Structural annotation	COG3506	NA	NA
UHGV-0208925_25	Pfam	PF18902	NA	DUF5658
UHGV-0208925_25	Structural annotation	PF18902	NA	NA
UHGV-0208925_26	Structural annotation	PF04017, MF_01602, NF010922, COG0095	NA	NA
UHGV-0208925_28	UniRef90	UniRef90_A0A810QCC8	Peptidase S74 domain-containing protein	NA
UHGV-0208925_28	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-0208925_29	PHROG	phrog_6616	tail protein	tail
UHGV-0208925_29	UniRef90	UniRef90_A0A2Z4QA17	KID repeat-containing protein	NA
UHGV-0208925_29	eggNOG-mapper	1235797.C816_04180	NA	NA
UHGV-0208925_29	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-0208925_30	PHROG	phrog_1194	NA	unknown function
UHGV-0208925_30	eggNOG-mapper	1232443.BAIA02000078_gene17	NA	NA
UHGV-0208925_30	Pfam	PF20458	NA	DUF6711
UHGV-0208925_30	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-0208925_31	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0208925_31	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-0208925_31	eggNOG-mapper	1235797.C816_04182	SLT domain	NA
UHGV-0208925_31	COG	COG1511	NA	NA
UHGV-0208925_31	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-0208925_32	PHROG	phrog_806	NA	unknown function
UHGV-0208925_32	UniRef90	UniRef90_UPI00137B5163	NA	NA
UHGV-0208925_32	eggNOG-mapper	397290.C810_05150	NA	NA
UHGV-0208925_32	Pfam	PF11611	NA	DUF4352
UHGV-0208925_32	Structural annotation	PF11611, MF_00791, NF003967, COG2967	NA	NA
UHGV-0208925_33	PHROG	phrog_706	NA	unknown function
UHGV-0208925_33	UniRef90	UniRef90_UPI000682A80B	Gp15 family bacteriophage protein	NA
UHGV-0208925_33	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-0208925_33	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0208925_33	Structural annotation	PF06854	NA	NA
UHGV-0208925_34	PHROG	phrog_11299	NA	unknown function
UHGV-0208925_34	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0208925_34	Structural annotation	PF10666	NA	NA
UHGV-0208925_35	PHROG	phrog_3099	NA	unknown function
UHGV-0208925_35	eggNOG-mapper	1232443.BAIA02000078_gene23	NA	NA
UHGV-0208925_35	Structural annotation	PF10772, TIGR02126, COG3499	NA	NA
UHGV-0208925_36	PHROG	phrog_3266	tail completion	connector
UHGV-0208925_36	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0208925_36	Structural annotation	PF12691	NA	NA
UHGV-0208925_37	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0208925_37	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-0208925_37	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0208925_37	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0208925_37	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0208925_38	PHROG	phrog_3366	NA	unknown function
UHGV-0208925_38	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0208925_38	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0208925_39	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0208925_39	eggNOG-mapper	642492.Clole_0822	NA	NA
UHGV-0208925_40	PHROG	phrog_10	major head protein	head and packaging
UHGV-0208925_40	UniRef90	UniRef90_A0A2U1BEF2	HK97 family phage major capsid protein	NA
UHGV-0208925_40	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-0208925_40	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0208925_40	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0208925_40	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0208925_40	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0208925_41	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0208925_41	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-0208925_42	Structural annotation	PF18152	NA	NA
UHGV-0208925_44	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0208925_44	UniRef90	UniRef90_A0A1C5N7V1	Phage minor capsid protein 2	NA
UHGV-0208925_44	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0208925_44	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0208925_44	COG	COG2369	NA	NA
UHGV-0208925_44	Structural annotation	PF06152	NA	NA
UHGV-0208925_45	PHROG	phrog_8680	NA	unknown function
UHGV-0208925_45	UniRef90	UniRef90_A0A3R6D7I3	NA	NA
UHGV-0208925_45	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-0208925_45	Pfam	PF14386	NA	DUF4417
UHGV-0208925_45	Structural annotation	PF14386	NA	NA
UHGV-0208925_46	PHROG	phrog_9479	NA	unknown function
UHGV-0208925_46	eggNOG-mapper	1514668.JOOA01000002_gene2680	NA	NA
UHGV-0208925_46	Structural annotation	PF15529	NA	NA
UHGV-0208925_48	PHROG	phrog_533	portal protein	head and packaging
UHGV-0208925_48	UniRef90	UniRef90_UPI0006C81717	phage portal protein	NA
UHGV-0208925_48	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-0208925_48	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0208925_48	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0208925_49	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0208925_49	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-0208925_49	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-0208925_49	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-0208925_49	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0208925_49	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0208925_49	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0208925_49	COG	COG1783	Phage terminase large subunit	NA
UHGV-0208925_49	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0208925_50	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0208925_50	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0208925_50	UniRef90	UniRef90_UPI001D05F697	terminase small subunit	NA
UHGV-0208925_50	eggNOG-mapper	697281.Mahau_0566	Terminase Small Subunit	NA
UHGV-0208925_50	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0208925_50	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0208925_50	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0208925_51	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0208925_51	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0208925_51	UniRef90	UniRef90_A0A8D9PDC4	Repressor protein	NA
UHGV-0208925_51	eggNOG-mapper	1226322.HMPREF1545_00039	sequence-specific DNA binding	NA
UHGV-0208925_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208925_51	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208925_51	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0208925_52	PHROG	phrog_236	nucleotide kinase	other
UHGV-0208925_52	UniRef90	UniRef90_UPI001CA83796	NA	NA
UHGV-0208925_52	eggNOG-mapper	1033743.CAES01000020_gene3148	NA	NA
UHGV-0208925_52	Pfam	PF11753	NA	DUF3310
UHGV-0208925_56	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0208925_56	PHROG	phrog_23224	DNA methyltransferase	other
UHGV-0208925_56	UniRef90	UniRef90_D4K450	Methyltransferase	NA
UHGV-0208925_56	eggNOG-mapper	718252.FP2_06750	DNA methylase	NA
UHGV-0208925_56	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-0208925_56	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0208925_56	COG	COG0863	DNA modification methylase	NA
UHGV-0208925_56	Structural annotation	PF01555, NF010253, COG0863	NA	NA
UHGV-0208925_57	PHROG	phrog_3136	NA	unknown function
UHGV-0208925_57	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-0208925_57	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0208925_57	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0208925_57	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0208925_59	UniRef90	UniRef90_UPI0012AD39DD	leucine-rich repeat protein	NA
UHGV-0208925_60	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-0208925_60	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-0208925_61	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0208925_61	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0208925_61	UniRef90	UniRef90_A0A316NA61	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0208925_61	eggNOG-mapper	718252.FP2_16350	C-5 cytosine-specific DNA methylase	NA
UHGV-0208925_61	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-0208925_61	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0208925_61	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0208925_61	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0208925_64	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0208925_64	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0208925_64	UniRef90	UniRef90_A0A136WJ13	Endodeoxyribonuclease RusA	NA
UHGV-0208925_64	eggNOG-mapper	632245.CLP_1623	Endodeoxyribonuclease RusA	NA
UHGV-0208925_64	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0208925_64	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0208925_64	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0208925_65	PHROG	phrog_9804	NA	unknown function
UHGV-0208925_65	UniRef90	UniRef90_A0A8D9PDS1	Replisome organizer	NA
UHGV-0208925_65	eggNOG-mapper	1121344.JHZO01000003_gene981	Loader and inhibitor of phage G40P	NA
UHGV-0208925_65	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0208925_65	Structural annotation	PF11417	NA	NA
UHGV-0208925_66	PHROG	phrog_2149	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0208925_66	eggNOG-mapper	742740.HMPREF9474_03117	NA	NA
UHGV-0208925_66	Structural annotation	PF01978, NF000243, COG0735	NA	NA
UHGV-0208925_67	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0208925_67	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0208925_67	UniRef90	UniRef90_R5SNS5	Single-stranded DNA-binding protein	NA
UHGV-0208925_67	eggNOG-mapper	1007096.BAGW01000007_gene1922	Single-strand binding protein family	NA
UHGV-0208925_67	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0208925_67	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0208925_67	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0208925_67	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0208925_67	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0208925_68	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0208925_68	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0208925_68	UniRef90	UniRef90_UPI0018C50A8E	recombinase RecT	NA
UHGV-0208925_68	eggNOG-mapper	1196028.ALEF01000043_gene487	RecT family	NA
UHGV-0208925_68	Pfam	PF03837	RecT family	RecT
UHGV-0208925_68	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0208925_68	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0208925_68	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0208925_69	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208925_69	UniRef90	UniRef90_U2SK35	YqaJ viral recombinase family protein	NA
UHGV-0208925_69	eggNOG-mapper	1226322.HMPREF1545_00014	YqaJ viral recombinase family	NA
UHGV-0208925_69	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0208925_69	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0208925_69	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0208925_69	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0208925_71	PHROG	phrog_22529	NA	unknown function
UHGV-0208925_71	UniRef90	UniRef90_A0A352RPR8	3D domain-containing protein	NA
UHGV-0208925_71	eggNOG-mapper	1298920.KI911353_gene568	3D domain	NA
UHGV-0208925_71	Pfam	PF06725	3D domain	3D
UHGV-0208925_71	COG	COG3584	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	NA
UHGV-0208925_71	Structural annotation	PF06725, MF_02071, NF040670, COG3584	NA	NA
UHGV-0208925_74	Structural annotation	TIGR01898, COG1604	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208925	Yes	43,644 bps	52.93%	100.00%	0.9819
UHGV-0179456	No	23,962 bps	52.20%	56.45%	0.9821