vOTU-048437

Overview

vOTU representative UHGV-0209080

No. of genomes 3

Genome length 41,026 bps

Completeness 100.00% (complete)

Host CAG-170 sp000432135

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048437
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00060 › vGENUS-00089 › vSUBGEN-24017 › vOTU-048437
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170 › CAG-170 sp000432135
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209080
BioSample	SAMN00085940
Genome length	41,026 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	92.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209080_1	PHROG	phrog_156	portal protein	head and packaging
UHGV-0209080_1	eggNOG-mapper	1410650.JHWL01000003_gene2833	NA	NA
UHGV-0209080_1	Structural annotation	PF16510, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0209080_3	PHROG	phrog_37329	NA	unknown function
UHGV-0209080_3	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-0209080_3	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0209080_3	Structural annotation	PF17744, PF16655, MF_01905, NF038116, COG3979, COG2033	NA	NA
UHGV-0209080_4	eggNOG-mapper	537007.BLAHAN_05255	NA	NA
UHGV-0209080_5	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-0209080_5	eggNOG-mapper	1410650.JHWL01000003_gene2827	NA	NA
UHGV-0209080_5	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-0209080_6	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0209080_6	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-0209080_6	UniRef90	UniRef90_A0A810Q5R0	Phage terminase large subunit	NA
UHGV-0209080_6	eggNOG-mapper	1410650.JHWL01000003_gene2834	NA	NA
UHGV-0209080_6	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0209080_6	COG	COG1783	Phage terminase large subunit	NA
UHGV-0209080_6	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0209080_7	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0209080_7	UniRef90	UniRef90_UPI001F487344	DNA-packaging protein	NA
UHGV-0209080_7	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-0209080_7	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0209080_7	Structural annotation	PF16677	NA	NA
UHGV-0209080_8	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0209080_8	eggNOG-mapper	537013.CLOSTMETH_02141	NA	NA
UHGV-0209080_8	Structural annotation	PF21578, MF_00360	NA	NA
UHGV-0209080_9	PHROG	phrog_21498	NA	unknown function
UHGV-0209080_9	eggNOG-mapper	78346.BRUM_0376	DNA binding	NA
UHGV-0209080_9	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0209080_9	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-0209080_11	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209080_11	eggNOG-mapper	1423807.BACO01000037_gene1103	NA	NA
UHGV-0209080_13	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0209080_13	UniRef90	UniRef90_UPI0006C2AC63	NA	NA
UHGV-0209080_13	eggNOG-mapper	693746.OBV_25250	NA	NA
UHGV-0209080_13	Pfam	PF06356	NA	DUF1064
UHGV-0209080_13	Structural annotation	PF06356	NA	NA
UHGV-0209080_16	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209080_16	UniRef90	UniRef90_A0A415ZMS1	HNH endonuclease	NA
UHGV-0209080_16	eggNOG-mapper	1511.CLOST_1546	HNH endonuclease	NA
UHGV-0209080_16	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0209080_16	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0209080_16	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-0209080_17	PHROG	phrog_38832	NA	unknown function
UHGV-0209080_17	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0209080_18	PHROG	phrog_3136	NA	unknown function
UHGV-0209080_18	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-0209080_18	eggNOG-mapper	642492.Clole_1416	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0209080_18	Pfam	PF04266	ASCH domain	ASCH
UHGV-0209080_18	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0209080_18	Structural annotation	PF04266, MF_00684, NF008917, COG4933	NA	NA
UHGV-0209080_19	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0209080_19	UniRef90	UniRef90_A0A1Q6JI14	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0209080_19	eggNOG-mapper	1410628.JNKS01000054_gene544	NA	NA
UHGV-0209080_19	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0209080_19	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0209080_19	Structural annotation	PF01507, MF_01161, NF006327, COG0175	NA	NA
UHGV-0209080_21	PHROG	phrog_111	DNA methyltransferase	other
UHGV-0209080_21	UniRef90	UniRef90_A0A1Y4EVK6	Adenine methyltransferase	NA
UHGV-0209080_21	eggNOG-mapper	1121121.KB894312_gene3179	DNA N-6-adenine-methyltransferase	NA
UHGV-0209080_21	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-0209080_21	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0209080_21	Structural annotation	PF05869, MF_03187, TIGR01712, COG2263	NA	NA
UHGV-0209080_24	Structural annotation	PF05082	NA	NA
UHGV-0209080_25	Structural annotation	NF041247	NA	NA
UHGV-0209080_28	Structural annotation	PF10548	NA	NA
UHGV-0209080_31	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0209080_31	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0209080_31	UniRef90	UniRef90_A0A2U1BEG8	Helix-turn-helix protein	NA
UHGV-0209080_31	eggNOG-mapper	903814.ELI_1263	Helix-turn-helix domain	NA
UHGV-0209080_31	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0209080_31	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0209080_31	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0209080_33	eggNOG-mapper	552398.HMPREF0866_02158	NOG18738 non supervised orthologous group	NA
UHGV-0209080_33	COG	COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	NA
UHGV-0209080_33	Structural annotation	PF02805	NA	NA
UHGV-0209080_34	PHROG	phrog_10292	NA	unknown function
UHGV-0209080_34	UniRef90	UniRef90_UPI00101CA94E	TM2 domain-containing protein	NA
UHGV-0209080_34	eggNOG-mapper	1198452.Jab_1c20720	TM2 domain	NA
UHGV-0209080_34	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0209080_34	Pfam	PF05154	TM2 domain	TM2
UHGV-0209080_34	COG	COG2314	NA	NA
UHGV-0209080_35	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209080_35	Structural annotation	PF12844, MF_00535, NF041677, COG1396	NA	NA
UHGV-0209080_36	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0209080_36	PHROG	phrog_95	integrase	integration and excision
UHGV-0209080_36	UniRef90	UniRef90_G9YSD9	Resolvase protein	NA
UHGV-0209080_36	eggNOG-mapper	1408437.JNJN01000002_gene1420	Resolvase, N terminal domain	NA
UHGV-0209080_36	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0209080_36	Pfam	PF07508	Recombinase	Recombinase
UHGV-0209080_36	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0209080_36	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0209080_36	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0209080_37	UniRef90	UniRef90_A0A7M1RTM1	RNA polymerase sigma factor/ubiquitin-like protein	NA
UHGV-0209080_37	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0209080_40	KOfam	K19167	abiQ; protein AbiQ	NA
UHGV-0209080_40	PHROG	phrog_9764	NA	unknown function
UHGV-0209080_40	UniRef90	UniRef90_A0A845R8D8	Type III toxin-antitoxin system ToxN/AbiQ family toxin	NA
UHGV-0209080_40	eggNOG-mapper	1519439.JPJG01000060_gene1906	Toxin ToxN, type III toxin-antitoxin system	NA
UHGV-0209080_40	PADLOC	AbiQ	AbiQ	Abi
UHGV-0209080_40	Pfam	PF13958	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
UHGV-0209080_40	Structural annotation	PF13958	NA	NA
UHGV-0209080_42	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0209080_42	PHROG	phrog_1794	amidase	lysis
UHGV-0209080_42	UniRef90	UniRef90_N1ZHY5	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0209080_42	eggNOG-mapper	97138.C820_00251	Ami_2	NA
UHGV-0209080_42	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0209080_42	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0209080_42	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0209080_43	PHROG	phrog_443	holin	lysis
UHGV-0209080_43	UniRef90	UniRef90_A0A4R1QPE5	Phage r1t holin	NA
UHGV-0209080_43	eggNOG-mapper	1469948.JPNB01000002_gene3855	Putative lactococcus lactis phage r1t holin	NA
UHGV-0209080_43	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0209080_43	Structural annotation	PF16945	NA	NA
UHGV-0209080_44	PHROG	phrog_937	hemolysin	other
UHGV-0209080_44	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-0209080_45	PHROG	phrog_37900	NA	unknown function
UHGV-0209080_45	UniRef90	UniRef90_R5IRZ6	NA	NA
UHGV-0209080_45	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-0209080_45	Pfam	PF19789	NA	DUF6273
UHGV-0209080_45	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0209080_45	Structural annotation	PF19789	NA	NA
UHGV-0209080_46	KOfam	K06236	COL1A; collagen type I alpha	NA
UHGV-0209080_46	PHROG	phrog_6320	tail fiber protein	tail
UHGV-0209080_46	eggNOG-mapper	1519439.JPJG01000060_gene1892	Collagen triple helix repeat (20 copies)	NA
UHGV-0209080_46	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0209080_46	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0209080_47	Structural annotation	PF18962, NF011773	NA	NA
UHGV-0209080_48	PHROG	phrog_22978	NA	unknown function
UHGV-0209080_48	eggNOG-mapper	1408437.JNJN01000039_gene389	heme binding	NA
UHGV-0209080_48	Pfam	PF18760	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
UHGV-0209080_48	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0209080_49	UniRef90	UniRef90_R5DCX9	PG_binding_1 domain-containing protein	NA
UHGV-0209080_49	eggNOG-mapper	1410650.JHWL01000003_gene2815	NA	NA
UHGV-0209080_50	PHROG	phrog_12105	NA	unknown function
UHGV-0209080_50	eggNOG-mapper	1226322.HMPREF1545_03850	NA	NA
UHGV-0209080_52	eggNOG-mapper	1410650.JHWL01000003_gene2830	NA	NA
UHGV-0209080_53	PHROG	phrog_1357	major head protein	head and packaging
UHGV-0209080_53	UniRef90	UniRef90_A0A2V2CFL5	N4-gp56 family major capsid protein	NA
UHGV-0209080_53	eggNOG-mapper	1410650.JHWL01000003_gene2830	NA	NA
UHGV-0209080_53	Pfam	PF13252	NA	DUF4043
UHGV-0209080_53	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0209080_53	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0209080_54	PHROG	phrog_13908	NA	unknown function
UHGV-0209080_54	eggNOG-mapper	1410650.JHWL01000003_gene2831	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0209080	Yes	41,026 bps	59.19%	100.00%	0.9823
UHGV-1460657	No	21,509 bps	59.83%	51.35%	0.9815
UHGV-0263787	No	12,045 bps	61.16%	28.77%	0.9809