vOTU-048445

Overview

vOTU representative UHGV-0209168

No. of genomes 10

Genome length 34,138 bps

Completeness 100.00% (complete)

Host Ruminococcus E sp003526955

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048445
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00134 › vGENUS-00673 › vSUBGEN-33610 › vOTU-048445
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E sp003526955
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209168
BioSample	SAMN00036435
Genome length	34,138 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	49
CDS density	93.53%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209168_1	PHROG	phrog_10	major head protein	head and packaging
UHGV-0209168_1	UniRef90	UniRef90_A0A412ULW9	Phage major capsid protein	NA
UHGV-0209168_1	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-0209168_1	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0209168_1	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0209168_1	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0209168_1	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0209168_2	PHROG	phrog_749	NA	unknown function
UHGV-0209168_2	UniRef90	UniRef90_A0A1G5CMX8	Phage gp6-like head-tail connector protein	NA
UHGV-0209168_2	eggNOG-mapper	349161.Dred_2603	NA	NA
UHGV-0209168_3	PHROG	phrog_19734	NA	unknown function
UHGV-0209168_3	eggNOG-mapper	86416.Clopa_0343	NA	NA
UHGV-0209168_3	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0209168_4	eggNOG-mapper	1123315.AUIP01000001_gene1429	NA	NA
UHGV-0209168_4	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-0209168_5	UniRef90	UniRef90_UPI000E5564A4	HK97 gp10 family phage protein	NA
UHGV-0209168_5	eggNOG-mapper	1118057.CAGX01000043_gene486	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0209168_5	Structural annotation	TIGR01725	NA	NA
UHGV-0209168_6	PHROG	phrog_88	major tail protein	tail
UHGV-0209168_6	UniRef90	UniRef90_A0A1G5CNS8	Phage major tail protein, phi13 family	NA
UHGV-0209168_6	eggNOG-mapper	411470.RUMGNA_02319	COG NOG11304 non supervised orthologous group	NA
UHGV-0209168_6	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0209168_6	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0209168_7	Structural annotation	PF11836	NA	NA
UHGV-0209168_9	KOfam	K20282	GCC2; GRIP and coiled-coil domain-containing protein 2	NA
UHGV-0209168_9	PHROG	phrog_5218	NA	unknown function
UHGV-0209168_9	UniRef90	UniRef90_UPI000E474EFE	phage tail tape measure protein	NA
UHGV-0209168_9	eggNOG-mapper	999413.HMPREF1094_02001	Phage-related minor tail protein	NA
UHGV-0209168_9	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0209168_9	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0209168_9	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0209168_10	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0209168_10	UniRef90	UniRef90_UPI000BB5198E	phage tail family protein	NA
UHGV-0209168_10	eggNOG-mapper	272623.L63101	phage tail	NA
UHGV-0209168_10	COG	COG4722	Phage-related protein YomH	NA
UHGV-0209168_10	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0209168_11	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0209168_11	UniRef90	UniRef90_A0A1G5CPD2	Phage minor structural protein, N-terminal region	NA
UHGV-0209168_11	eggNOG-mapper	1567011.A0A0A7RUI9_9VIRU	N-acetylmuramoyl-L-alanine amidase activity	NA
UHGV-0209168_11	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0209168_11	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0209168_12	Structural annotation	PF10651, PF01095	NA	NA
UHGV-0209168_13	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0209168_13	PHROG	phrog_833	endolysin	lysis
UHGV-0209168_13	UniRef90	UniRef90_R6MSP5	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0209168_13	eggNOG-mapper	428125.CLOLEP_01782	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0209168_13	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0209168_13	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0209168_13	Structural annotation	PF01510, PF01471, MF_04111, NF008758, COG5632, COG3409	NA	NA
UHGV-0209168_14	PHROG	phrog_1863	NA	unknown function
UHGV-0209168_14	UniRef90	UniRef90_UPI001E345E1F	hemolysin XhlA family protein	NA
UHGV-0209168_14	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-0209168_15	PHROG	phrog_443	holin	lysis
UHGV-0209168_15	UniRef90	UniRef90_R6MWB0	Conserved domain protein	NA
UHGV-0209168_15	eggNOG-mapper	1235797.C816_04172	Putative lactococcus lactis phage r1t holin	NA
UHGV-0209168_15	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0209168_15	Structural annotation	PF16945	NA	NA
UHGV-0209168_16	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-0209168_16	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0209168_16	UniRef90	UniRef90_A0A1C6HHY1	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-0209168_16	eggNOG-mapper	742733.HMPREF9469_02855	COG COG0338 Site-specific DNA methylase	NA
UHGV-0209168_16	PADLOC	MTase_II_00080	Type II methyltransferase	RM
UHGV-0209168_16	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0209168_16	NCBIFam	TIGR00571.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA
UHGV-0209168_16	COG	COG0338	DNA-adenine methylase	NA
UHGV-0209168_16	Structural annotation	PF02086, MF_00934, TIGR00571, COG0338	NA	NA
UHGV-0209168_17	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0209168_17	UniRef90	UniRef90_A0A413QHG2	XRE family transcriptional regulator	NA
UHGV-0209168_17	eggNOG-mapper	411471.SUBVAR_06679	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0209168_17	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0209168_17	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0209168_17	Structural annotation	PF13443, NF041951, COG3655	NA	NA
UHGV-0209168_18	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0209168_18	PHROG	phrog_95	integrase	integration and excision
UHGV-0209168_18	UniRef90	UniRef90_UPI001E5635E3	recombinase family protein	NA
UHGV-0209168_18	eggNOG-mapper	1408424.JHYI01000021_gene28	Recombinase	NA
UHGV-0209168_18	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0209168_18	Pfam	PF07508	Recombinase	Recombinase
UHGV-0209168_18	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0209168_18	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0209168_19	PHROG	phrog_18108	NA	unknown function
UHGV-0209168_19	Structural annotation	PF07443	NA	NA
UHGV-0209168_20	UniRef90	UniRef90_UPI00164C32DE	CopG family transcriptional regulator	NA
UHGV-0209168_22	KOfam	K14059	int; integrase	NA
UHGV-0209168_22	PHROG	phrog_1	integrase	integration and excision
UHGV-0209168_22	UniRef90	UniRef90_UPI000E4C7350	site-specific integrase	NA
UHGV-0209168_22	eggNOG-mapper	1095750.HMPREF9970_1688	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0209168_22	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0209168_22	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0209168_22	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0209168_22	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0209168_23	PHROG	phrog_1847	NA	unknown function
UHGV-0209168_23	UniRef90	UniRef90_U2Q2K4	T5orf172 domain-containing protein	NA
UHGV-0209168_23	eggNOG-mapper	1256908.HMPREF0373_00641	T5orf172	NA
UHGV-0209168_23	Pfam	PF13455	Meiotically up-regulated gene 113	MUG113
UHGV-0209168_23	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0209168_23	Structural annotation	PF13250, NF041454	NA	NA
UHGV-0209168_24	PHROG	phrog_1914	NA	unknown function
UHGV-0209168_24	UniRef90	UniRef90_A0A374NDM7	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0209168_24	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-0209168_24	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0209168_24	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0209168_24	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0209168_25	UniRef90	UniRef90_A0A373XLN2	XRE family transcriptional regulator	NA
UHGV-0209168_25	eggNOG-mapper	999413.HMPREF1094_00245	Peptidase S24-like	NA
UHGV-0209168_25	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-0209168_25	Structural annotation	PF05339, NF007257, COG3655	NA	NA
UHGV-0209168_26	UniRef90	UniRef90_A0A374DVN3	DNA-binding protein	NA
UHGV-0209168_26	eggNOG-mapper	411902.CLOBOL_02554	NA	NA
UHGV-0209168_27	Structural annotation	PF13443, MF_00535, NF041951, COG1396	NA	NA
UHGV-0209168_28	Structural annotation	COG1862	NA	NA
UHGV-0209168_32	PHROG	phrog_36399	NA	unknown function
UHGV-0209168_33	PHROG	phrog_8470	NA	unknown function
UHGV-0209168_33	UniRef90	UniRef90_A0A1M7BII1	PcfJ-like protein	NA
UHGV-0209168_33	eggNOG-mapper	1235790.C805_00306	PcfJ-like protein	NA
UHGV-0209168_33	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0209168_33	Structural annotation	PF14284	NA	NA
UHGV-0209168_34	PHROG	phrog_15609	NA	unknown function
UHGV-0209168_34	UniRef90	UniRef90_A0A373SLQ6	NA	NA
UHGV-0209168_34	eggNOG-mapper	1514668.JOOA01000001_gene225	NA	NA
UHGV-0209168_34	Structural annotation	PF11300, NF038070	NA	NA
UHGV-0209168_36	PHROG	phrog_24518	NA	unknown function
UHGV-0209168_36	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-0209168_38	PHROG	phrog_8684	NA	unknown function
UHGV-0209168_38	UniRef90	UniRef90_A0A374DV44	YopX domain-containing protein	NA
UHGV-0209168_38	eggNOG-mapper	742767.HMPREF9456_03352	YopX protein	NA
UHGV-0209168_38	Pfam	PF09643	YopX protein	YopX
UHGV-0209168_38	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0209168_38	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0209168_39	PHROG	phrog_25754	NA	unknown function
UHGV-0209168_39	eggNOG-mapper	97139.C824_00736	NA	NA
UHGV-0209168_39	Structural annotation	PF10842, MF_00436, TIGR02383	NA	NA
UHGV-0209168_40	PHROG	phrog_30343	NA	unknown function
UHGV-0209168_40	UniRef90	UniRef90_UPI0019620485	GNAT family N-acetyltransferase	NA
UHGV-0209168_40	eggNOG-mapper	411473.RUMCAL_00285	NA	NA
UHGV-0209168_40	Structural annotation	PF11039, MF_02210, TIGR03585, COG1670	NA	NA
UHGV-0209168_41	PHROG	phrog_824	NA	unknown function
UHGV-0209168_41	UniRef90	UniRef90_A0A3D3D6C6	VRR-NUC domain-containing protein	NA
UHGV-0209168_41	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-0209168_41	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0209168_41	Structural annotation	PF08774	NA	NA
UHGV-0209168_43	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0209168_43	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-0209168_43	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0209168_44	Structural annotation	TIGR01636	NA	NA
UHGV-0209168_45	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209168_45	UniRef90	UniRef90_A0A412ULY9	HNH endonuclease	NA
UHGV-0209168_45	eggNOG-mapper	1405.DJ92_863	HNH endonuclease	NA
UHGV-0209168_45	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0209168_45	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0209168_46	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0209168_46	UniRef90	UniRef90_UPI00057D0A7C	P27 family phage terminase small subunit	NA
UHGV-0209168_46	eggNOG-mapper	86416.Clopa_0336	NA	NA
UHGV-0209168_46	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0209168_46	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0209168_47	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0209168_47	UniRef90	UniRef90_A0A412UM03	Terminase large subunit	NA
UHGV-0209168_47	eggNOG-mapper	86416.Clopa_0337	Phage Terminase	NA
UHGV-0209168_47	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0209168_47	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0209168_47	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0209168_47	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0209168_48	PHROG	phrog_12	portal protein	head and packaging
UHGV-0209168_48	UniRef90	UniRef90_A0A412ULV9	Phage portal protein	NA
UHGV-0209168_48	eggNOG-mapper	1415774.U728_1254	Phage portal protein	NA
UHGV-0209168_48	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0209168_48	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0209168_48	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0209168_48	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0209168_49	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0209168_49	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0209168_49	UniRef90	UniRef90_A0A412ULU1	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0209168_49	eggNOG-mapper	86416.Clopa_0340	Belongs to the peptidase S14 family	NA
UHGV-0209168_49	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0209168_49	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0209168_49	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0209168	Yes	34,138 bps	36.42%	100.00%	0.9635
UHGV-1935055	No	43,252 bps	35.73%	99.90%	0.9453
UHGV-0138280	No	33,841 bps	36.46%	96.19%	0.9516
UHGV-1531199	No	31,938 bps	36.64%	90.78%	0.9671
UHGV-2231157	No	22,319 bps	36.67%	63.44%	0.9642
UHGV-1439127	No	18,841 bps	37.05%	53.55%	0.9639
UHGV-2229179	No	18,816 bps	34.89%	48.51%	0.9178
UHGV-1727249	No	15,420 bps	36.99%	43.83%	0.9689
UHGV-1730580	No	14,144 bps	36.66%	40.20%	0.9573
UHGV-0227260	No	11,375 bps	34.20%	28.88%	0.9044