vOTU-048494

Overview

vOTU representative UHGV-0209534

No. of genomes 12

Genome length 45,954 bps

Completeness 100.00% (complete)

Host Flavonifractor plautii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048494
Number of genomes	12
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-01055 › vGENUS-01671 › vSUBGEN-41454 › vOTU-048494
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › Flavonifractor › Flavonifractor plautii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209534
BioSample	NA
Genome length	45,954 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	65
CDS density	91.08%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209534_1	UniRef90	UniRef90_UPI001899C2C3	helix-turn-helix domain-containing protein	NA
UHGV-0209534_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209534_1	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0209534_2	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209534_2	UniRef90	UniRef90_A0A6L8SWJ4	AP2 domain-containing protein	NA
UHGV-0209534_2	eggNOG-mapper	411462.DORLON_00791	NA	NA
UHGV-0209534_7	PHROG	phrog_38832	NA	unknown function
UHGV-0209534_7	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0209534_8	Structural annotation	NF000937	NA	NA
UHGV-0209534_9	UniRef90	UniRef90_UPI001C3A10B1	Zinc ribbon domain-containing protein	NA
UHGV-0209534_9	eggNOG-mapper	742738.HMPREF9460_04055	NA	NA
UHGV-0209534_10	UniRef90	UniRef90_UPI0018AC14ED	Lar family restriction alleviation protein	NA
UHGV-0209534_10	eggNOG-mapper	742738.HMPREF9460_04054	Restriction alleviation protein Lar	NA
UHGV-0209534_10	Structural annotation	PF14354, NF007260	NA	NA
UHGV-0209534_11	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0209534_11	PHROG	phrog_363	DNA methyltransferase	other
UHGV-0209534_11	UniRef90	UniRef90_A0A6I2QZV1	Cytosine-specific methyltransferase	NA
UHGV-0209534_11	eggNOG-mapper	742738.HMPREF9460_04053	C-5 cytosine-specific DNA methylase	NA
UHGV-0209534_11	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0209534_11	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0209534_11	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0209534_11	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0209534_11	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0209534_12	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0209534_12	PHROG	phrog_4632	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0209534_12	UniRef90	UniRef90_A0A1V5ZUM0	Endodeoxyribonuclease RusA	NA
UHGV-0209534_12	eggNOG-mapper	469604.HMPREF0946_00819	NA	NA
UHGV-0209534_12	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0209534_14	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0209534_14	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0209534_14	UniRef90	UniRef90_UPI0018973262	AAA family ATPase	NA
UHGV-0209534_14	eggNOG-mapper	742738.HMPREF9460_00852	Participates in initiation and elongation during chromosome replication	NA
UHGV-0209534_14	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0209534_14	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0209534_14	COG	COG0305	Replicative DNA helicase	NA
UHGV-0209534_14	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0209534_15	PHROG	phrog_15768	NA	unknown function
UHGV-0209534_15	UniRef90	UniRef90_UPI00189C2664	NA	NA
UHGV-0209534_15	eggNOG-mapper	203119.Cthe_2466	NA	NA
UHGV-0209534_15	Pfam	PF19808	NA	DUF6291
UHGV-0209534_15	Structural annotation	PF19808	NA	NA
UHGV-0209534_16	PHROG	phrog_862	NA	unknown function
UHGV-0209534_16	eggNOG-mapper	279238.Saro_3022	NA	NA
UHGV-0209534_16	Structural annotation	PF05037, COG2965	NA	NA
UHGV-0209534_17	Structural annotation	PF09943	NA	NA
UHGV-0209534_18	eggNOG-mapper	537013.CLOSTMETH_01718	NA	NA
UHGV-0209534_19	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-0209534_19	PHROG	phrog_9562	NA	unknown function
UHGV-0209534_19	UniRef90	UniRef90_UPI001923F0E2	pentapeptide repeat-containing protein	NA
UHGV-0209534_19	eggNOG-mapper	1232443.BAIA02000078_gene49	Pentapeptide repeat protein	NA
UHGV-0209534_19	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-0209534_19	Pfam	PF19062	NA	DUF5758
UHGV-0209534_19	COG	COG1357	NA	NA
UHGV-0209534_19	Structural annotation	PF19062, PF13599, NF011744, COG1357	NA	NA
UHGV-0209534_22	Structural annotation	PF13560, MF_00535, NF041951, COG3655	NA	NA
UHGV-0209534_24	Structural annotation	PF03885	NA	NA
UHGV-0209534_25	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0209534_25	UniRef90	UniRef90_A0A412EXN2	XRE family transcriptional regulator	NA
UHGV-0209534_25	eggNOG-mapper	665950.HMPREF1025_02561	sequence-specific DNA binding	NA
UHGV-0209534_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209534_25	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0209534_25	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0209534_26	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0209534_26	UniRef90	UniRef90_UPI001915FD06	helix-turn-helix domain-containing protein	NA
UHGV-0209534_26	eggNOG-mapper	665950.HMPREF1025_02562	TRANSCRIPTIONal	NA
UHGV-0209534_26	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0209534_26	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0209534_27	PHROG	phrog_87	metallo-protease	other
UHGV-0209534_27	UniRef90	UniRef90_A0A1Y3RG05	Peptidase_M78 domain-containing protein	NA
UHGV-0209534_27	eggNOG-mapper	1007096.BAGW01000011_gene2354	IrrE N-terminal-like domain	NA
UHGV-0209534_27	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0209534_27	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0209534_27	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0209534_28	eggNOG-mapper	469381.Dpep_1324	PFAM Endonuclease Exonuclease phosphatase	NA
UHGV-0209534_28	COG	COG2374	Predicted extracellular nuclease	NA
UHGV-0209534_28	Structural annotation	PF10754	NA	NA
UHGV-0209534_29	KOfam	K14059	int; integrase	NA
UHGV-0209534_29	PHROG	phrog_1	integrase	integration and excision
UHGV-0209534_29	UniRef90	UniRef90_A0A174DBH0	Site-specific tyrosine recombinase XerC	NA
UHGV-0209534_29	eggNOG-mapper	1514668.JOOA01000001_gene242	Phage integrase family	NA
UHGV-0209534_29	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0209534_29	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0209534_29	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0209534_30	Structural annotation	PF12510	NA	NA
UHGV-0209534_31	PHROG	phrog_20016	NA	unknown function
UHGV-0209534_31	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0209534_31	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0209534_31	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0209534_32	PHROG	phrog_16490	NA	unknown function
UHGV-0209534_32	eggNOG-mapper	1226322.HMPREF1545_00076	NA	NA
UHGV-0209534_33	PHROG	phrog_22984	NA	unknown function
UHGV-0209534_34	PHROG	phrog_21718	NA	unknown function
UHGV-0209534_34	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0209534_35	PHROG	phrog_3754	NA	unknown function
UHGV-0209534_35	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0209534_37	UniRef90	UniRef90_A0A1C6JAI6	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-0209534_37	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0209534_38	UniRef90	UniRef90_U2AS96	MuF_C domain-containing protein	NA
UHGV-0209534_38	eggNOG-mapper	693746.OBV_01590	NA	NA
UHGV-0209534_39	eggNOG-mapper	1226322.HMPREF1545_00786	NA	NA
UHGV-0209534_40	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-0209534_40	eggNOG-mapper	1519439.JPJG01000060_gene1903	NA	NA
UHGV-0209534_40	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-0209534_42	eggNOG-mapper	1227349.C170_22575	Fibronectin type 3 domain	NA
UHGV-0209534_42	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0209534_42	Structural annotation	PF17166, NF038367, COG2033	NA	NA
UHGV-0209534_43	PHROG	phrog_16040	virion structural protein	head and packaging
UHGV-0209534_43	UniRef90	UniRef90_A0A174SCI3	Reovirus sigma C capsid protein	NA
UHGV-0209534_43	eggNOG-mapper	1226322.HMPREF1545_00783	Chaperone of endosialidase	NA
UHGV-0209534_44	PHROG	phrog_4105	NA	unknown function
UHGV-0209534_44	eggNOG-mapper	537013.CLOSTMETH_01753	NA	NA
UHGV-0209534_45	PHROG	phrog_1129	holin	lysis
UHGV-0209534_45	UniRef90	UniRef90_A0A1C7FPV3	Enolase	NA
UHGV-0209534_45	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0209534_45	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0209534_45	Structural annotation	PF06946	NA	NA
UHGV-0209534_46	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0209534_46	PHROG	phrog_18955	NA	unknown function
UHGV-0209534_46	UniRef90	UniRef90_A0A1C7FQI4	MurNAc-LAA domain-containing protein	NA
UHGV-0209534_46	eggNOG-mapper	1121344.JHZO01000003_gene744	Ami_3	NA
UHGV-0209534_46	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-0209534_46	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0209534_46	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0209534_46	Structural annotation	PF01520, PF09992, MF_00417, TIGR02883, COG0860, COG4632	NA	NA
UHGV-0209534_49	PHROG	phrog_27545	NA	unknown function
UHGV-0209534_49	eggNOG-mapper	742738.HMPREF9460_00363	NA	NA
UHGV-0209534_50	PHROG	phrog_37900	NA	unknown function
UHGV-0209534_50	UniRef90	UniRef90_UPI0018A945F9	NA	NA
UHGV-0209534_50	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-0209534_50	Pfam	PF19789	NA	DUF6273
UHGV-0209534_50	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0209534_50	Structural annotation	PF19789	NA	NA
UHGV-0209534_51	PHROG	phrog_10993	Hoc-like head decoration	head and packaging
UHGV-0209534_51	UniRef90	UniRef90_UPI0018AA16B6	NA	NA
UHGV-0209534_51	eggNOG-mapper	742738.HMPREF9460_02534	NA	NA
UHGV-0209534_51	Pfam	PF19789	NA	DUF6273
UHGV-0209534_51	Structural annotation	PF19789	NA	NA
UHGV-0209534_52	PHROG	phrog_10993	Hoc-like head decoration	head and packaging
UHGV-0209534_52	UniRef90	UniRef90_UPI0018AA21C1	NA	NA
UHGV-0209534_52	eggNOG-mapper	1226322.HMPREF1545_00064	NA	NA
UHGV-0209534_52	Pfam	PF19789	NA	DUF6273
UHGV-0209534_52	Structural annotation	PF19789	NA	NA
UHGV-0209534_53	KOfam	K19721	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	NA
UHGV-0209534_53	PHROG	phrog_6320	tail fiber protein	tail
UHGV-0209534_53	UniRef90	UniRef90_UPI0018A912A6	collagen-like protein	NA
UHGV-0209534_53	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0209534_54	PHROG	phrog_12105	NA	unknown function
UHGV-0209534_54	eggNOG-mapper	1226322.HMPREF1545_03850	NA	NA
UHGV-0209534_55	PHROG	phrog_371	major head protein	head and packaging
UHGV-0209534_55	UniRef90	UniRef90_R6TFU9	Mu-like_gpT domain-containing protein	NA
UHGV-0209534_55	eggNOG-mapper	1226322.HMPREF1545_03848	NA	NA
UHGV-0209534_55	Pfam	PF10124	Mu-like prophage major head subunit gpT	Mu-like_gpT
UHGV-0209534_55	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0209534_56	PHROG	phrog_24113	NA	unknown function
UHGV-0209534_56	eggNOG-mapper	1226322.HMPREF1545_03847	NA	NA
UHGV-0209534_56	Structural annotation	PF11133, COG5471	NA	NA
UHGV-0209534_57	PHROG	phrog_35275	NA	unknown function
UHGV-0209534_57	eggNOG-mapper	1226322.HMPREF1545_03846	NA	NA
UHGV-0209534_59	PHROG	phrog_156	portal protein	head and packaging
UHGV-0209534_59	eggNOG-mapper	1519439.JPJG01000060_gene1886	NA	NA
UHGV-0209534_59	Structural annotation	PF16510, MF_04120, TIGR01542, COG4695	NA	NA
UHGV-0209534_60	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0209534_60	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0209534_60	UniRef90	UniRef90_UPI001105ADB4	PBSX family phage terminase large subunit	NA
UHGV-0209534_60	eggNOG-mapper	1226322.HMPREF1545_03843	phage Terminase large subunit	NA
UHGV-0209534_60	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0209534_60	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0209534_60	COG	COG1783	Phage terminase large subunit	NA
UHGV-0209534_60	Structural annotation	PF04466, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0209534_61	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0209534_61	UniRef90	UniRef90_UPI001D01EB7C	helix-turn-helix domain-containing protein	NA
UHGV-0209534_61	eggNOG-mapper	1408437.JNJN01000045_gene597	HNH endonuclease	NA
UHGV-0209534_61	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-0209534_61	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0209534_61	Structural annotation	PF07141	NA	NA
UHGV-0209534_62	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0209534_62	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0209534_62	UniRef90	UniRef90_A0A7G5MXK6	Bro-N domain-containing protein	NA
UHGV-0209534_62	eggNOG-mapper	33035.JPJF01000057_gene3118	BRO family, N-terminal domain	NA
UHGV-0209534_62	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0209534_62	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0209534_62	COG	COG3617	Prophage antirepressor	NA
UHGV-0209534_62	Structural annotation	PF03374, PF02498, TIGR02681, COG3617, COG3645	NA	NA
UHGV-0209534_64	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0209534_64	PHROG	phrog_4836	CII-like regulator	transcription regulation
UHGV-0209534_64	UniRef90	UniRef90_U2R0P8	DNA-binding helix-turn-helix protein	NA
UHGV-0209534_64	eggNOG-mapper	1226322.HMPREF1545_02890	Helix-turn-helix XRE-family like proteins	NA
UHGV-0209534_64	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209534_64	Structural annotation	PF01381, NF041951, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0209534	Yes	45,954 bps	57.55%	100.00%	0.9798
UHGV-1355736	No	48,493 bps	56.74%	99.90%	0.9780
UHGV-1422484	No	27,208 bps	60.62%	61.53%	0.9801
UHGV-1378933	No	22,287 bps	60.18%	50.46%	0.9803
UHGV-1764226	No	15,214 bps	60.19%	34.36%	0.9812
UHGV-1767064	No	15,214 bps	60.19%	34.36%	0.9812
UHGV-0150219	No	13,255 bps	54.58%	29.92%	0.9759
UHGV-1739215	No	13,255 bps	54.58%	29.92%	0.9759
UHGV-0140681	No	10,820 bps	58.58%	24.25%	0.9814
UHGV-1754892	No	10,820 bps	58.58%	24.25%	0.9814
UHGV-1717816	No	10,525 bps	59.98%	23.77%	0.9799
UHGV-1966296	No	10,154 bps	58.93%	22.97%	0.9790