vOTU-048505

Overview

vOTU representative UHGV-0209658

No. of genomes 2

Genome length 43,301 bps

Completeness 100.00% (complete)

Host Clostridium Q symbiosum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048505
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00095 › vGENUS-02775 › vSUBGEN-36214 › vOTU-048505
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Clostridium Q › Clostridium Q symbiosum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209658
BioSample	SAMN11031305
Genome length	43,301 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	67
CDS density	89.00%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209658_1	PHROG	phrog_1029	NA	unknown function
UHGV-0209658_1	UniRef90	UniRef90_E7GRE5	NA	NA
UHGV-0209658_1	eggNOG-mapper	742740.HMPREF9474_03490	NA	NA
UHGV-0209658_1	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0209658_2	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0209658_2	UniRef90	UniRef90_A0A417AC21	Replication terminator protein	NA
UHGV-0209658_2	eggNOG-mapper	1423816.BACQ01000064_gene2526	NA	NA
UHGV-0209658_3	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0209658_3	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0209658_3	UniRef90	UniRef90_A0A413W4Q6	Recombinase	NA
UHGV-0209658_3	eggNOG-mapper	742740.HMPREF9474_03488	RecT family	NA
UHGV-0209658_3	Pfam	PF03837	RecT family	RecT
UHGV-0209658_3	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0209658_3	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0209658_3	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0209658_4	PHROG	phrog_674	NA	unknown function
UHGV-0209658_4	UniRef90	UniRef90_UPI000BE4798F	NA	NA
UHGV-0209658_4	eggNOG-mapper	742740.HMPREF9474_03487	NA	NA
UHGV-0209658_4	Pfam	PF07083	NA	DUF1351
UHGV-0209658_4	Structural annotation	PF07083	NA	NA
UHGV-0209658_5	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209658_5	UniRef90	UniRef90_E7GRE1	YqaJ domain-containing protein	NA
UHGV-0209658_5	eggNOG-mapper	742740.HMPREF9474_03486	YqaJ viral recombinase family	NA
UHGV-0209658_5	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0209658_5	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0209658_5	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0209658_5	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0209658_6	eggNOG-mapper	1232447.BAHW02000069_gene3429	NA	NA
UHGV-0209658_11	eggNOG-mapper	1485543.JMME01000023_gene2454	NA	NA
UHGV-0209658_15	UniRef90	UniRef90_A0A2N0KEJ1	LysM domain-containing protein	NA
UHGV-0209658_15	Pfam	PF01476	LysM domain	LysM
UHGV-0209658_15	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0209658_20	UniRef90	UniRef90_UPI001F2E20CD	helix-turn-helix transcriptional regulator	NA
UHGV-0209658_20	eggNOG-mapper	1235798.C817_04758	NA	NA
UHGV-0209658_20	Structural annotation	PF13443, NF010465, COG3655	NA	NA
UHGV-0209658_21	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0209658_21	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0209658_21	UniRef90	UniRef90_A0A1C6HIY1	Transcriptional repressor DicA	NA
UHGV-0209658_21	eggNOG-mapper	1235792.C808_03098	Peptidase S24-like	NA
UHGV-0209658_21	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209658_21	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0209658_21	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-0209658_21	Structural annotation	PF00717, PF01381, MF_00015, NF041951, NF007621, COG2932	NA	NA
UHGV-0209658_22	PHROG	phrog_7823	NA	unknown function
UHGV-0209658_22	eggNOG-mapper	33035.JPJF01000158_gene3562	NA	NA
UHGV-0209658_24	KOfam	K14059	int; integrase	NA
UHGV-0209658_24	PHROG	phrog_1	integrase	integration and excision
UHGV-0209658_24	UniRef90	UniRef90_A0A2N0KEJ6	Site-specific integrase	NA
UHGV-0209658_24	eggNOG-mapper	1304866.K413DRAFT_1180	Belongs to the 'phage' integrase family	NA
UHGV-0209658_24	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0209658_24	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0209658_24	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0209658_25	UniRef90	UniRef90_A0A1C6J7Y3	Predicted transcriptional regulator	NA
UHGV-0209658_25	eggNOG-mapper	1123302.KB904168_gene586	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0209658_25	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0209658_25	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0209658_25	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0209658_27	PHROG	phrog_2657	transcriptional regulator	transcription regulation
UHGV-0209658_27	UniRef90	UniRef90_UPI0002D18C60	Rha family transcriptional regulator	NA
UHGV-0209658_27	eggNOG-mapper	742740.HMPREF9474_03525	phage regulatory protein, rha family	NA
UHGV-0209658_27	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0209658_27	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0209658_27	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0209658_27	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0209658_28	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-0209658_28	PHROG	phrog_1794	amidase	lysis
UHGV-0209658_28	UniRef90	UniRef90_A0A5M8BPJ1	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0209658_28	eggNOG-mapper	742740.HMPREF9474_03524	Ami_2	NA
UHGV-0209658_28	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0209658_28	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0209658_28	Structural annotation	PF01510, PF19127, MF_04111, NF008758, TIGR04035, COG5632	NA	NA
UHGV-0209658_29	PHROG	phrog_11747	NA	unknown function
UHGV-0209658_29	UniRef90	UniRef90_A0A2H6JTF8	Serine dehydrogenase proteinase	NA
UHGV-0209658_29	eggNOG-mapper	397290.C810_00839	Periplasmic serine protease	NA
UHGV-0209658_29	Pfam	PF01972	Serine dehydrogenase proteinase	SDH_sah
UHGV-0209658_29	COG	COG0616	Periplasmic serine protease, ClpP class	NA
UHGV-0209658_30	PHROG	phrog_1129	holin	lysis
UHGV-0209658_30	UniRef90	UniRef90_A0A2N0KEV2	Enolase	NA
UHGV-0209658_30	eggNOG-mapper	742740.HMPREF9474_03522	NA	NA
UHGV-0209658_30	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0209658_30	Structural annotation	PF06946	NA	NA
UHGV-0209658_31	PHROG	phrog_1009	NA	unknown function
UHGV-0209658_31	UniRef90	UniRef90_A0A3E2WI44	Branched-chain amino acid ABC transporter permease	NA
UHGV-0209658_31	eggNOG-mapper	742740.HMPREF9474_03521	NA	NA
UHGV-0209658_33	PHROG	phrog_1129	holin	lysis
UHGV-0209658_33	UniRef90	UniRef90_E7GRH5	Holin	NA
UHGV-0209658_33	eggNOG-mapper	33035.JPJF01000043_gene995	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0209658_33	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0209658_34	PHROG	phrog_19111	NA	unknown function
UHGV-0209658_34	eggNOG-mapper	742740.HMPREF9474_03519	ATPase involved in DNA repair	NA
UHGV-0209658_34	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-0209658_34	Structural annotation	PF16351	NA	NA
UHGV-0209658_35	eggNOG-mapper	742740.HMPREF9474_03518	NA	NA
UHGV-0209658_36	PHROG	phrog_18725	NA	unknown function
UHGV-0209658_36	eggNOG-mapper	742740.HMPREF9474_03517	NA	NA
UHGV-0209658_37	PHROG	phrog_13879	NA	unknown function
UHGV-0209658_37	eggNOG-mapper	742740.HMPREF9474_03516	NA	NA
UHGV-0209658_37	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-0209658_38	PHROG	phrog_1194	NA	unknown function
UHGV-0209658_38	eggNOG-mapper	742740.HMPREF9474_03515	NA	NA
UHGV-0209658_38	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0209658_39	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0209658_39	UniRef90	UniRef90_A0A174WQ97	Phage-like protein	NA
UHGV-0209658_39	eggNOG-mapper	742740.HMPREF9474_03514	tape measure	NA
UHGV-0209658_39	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0209658_39	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0209658_40	PHROG	phrog_8355	NA	unknown function
UHGV-0209658_40	UniRef90	UniRef90_UPI001D07612A	bacteriophage Gp15 family protein	NA
UHGV-0209658_40	eggNOG-mapper	742740.HMPREF9474_03513	NA	NA
UHGV-0209658_40	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0209658_40	Structural annotation	PF06854	NA	NA
UHGV-0209658_41	PHROG	phrog_8300	NA	unknown function
UHGV-0209658_41	eggNOG-mapper	742740.HMPREF9474_03512	NA	NA
UHGV-0209658_41	Structural annotation	PF06854	NA	NA
UHGV-0209658_42	PHROG	phrog_820	major tail protein	tail
UHGV-0209658_42	eggNOG-mapper	742740.HMPREF9474_03511	domain, Protein	NA
UHGV-0209658_42	COG	COG5492	NA	NA
UHGV-0209658_42	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0209658_43	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0209658_43	UniRef90	UniRef90_UPI001D068DAC	minor capsid protein	NA
UHGV-0209658_43	eggNOG-mapper	742740.HMPREF9474_03510	NA	NA
UHGV-0209658_43	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0209658_43	Structural annotation	PF12691	NA	NA
UHGV-0209658_44	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0209658_44	eggNOG-mapper	742740.HMPREF9474_03509	NA	NA
UHGV-0209658_45	PHROG	phrog_8710	NA	unknown function
UHGV-0209658_45	eggNOG-mapper	742740.HMPREF9474_03508	NA	NA
UHGV-0209658_45	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0209658_46	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0209658_46	eggNOG-mapper	742740.HMPREF9474_03507	NA	NA
UHGV-0209658_47	PHROG	phrog_1378	NA	unknown function
UHGV-0209658_47	eggNOG-mapper	742740.HMPREF9474_03506	NA	NA
UHGV-0209658_48	PHROG	phrog_422	major head protein	head and packaging
UHGV-0209658_48	UniRef90	UniRef90_E7GRG0	Phage major capsid protein	NA
UHGV-0209658_48	eggNOG-mapper	742740.HMPREF9474_03505	NA	NA
UHGV-0209658_48	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0209658_49	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0209658_49	eggNOG-mapper	742740.HMPREF9474_03504	NA	NA
UHGV-0209658_51	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0209658_51	UniRef90	UniRef90_UPI00157055D2	minor capsid protein	NA
UHGV-0209658_51	eggNOG-mapper	742740.HMPREF9474_03503	Phage minor capsid protein 2	NA
UHGV-0209658_51	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0209658_51	COG	COG2369	NA	NA
UHGV-0209658_52	PHROG	phrog_25639	NA	unknown function
UHGV-0209658_52	eggNOG-mapper	742740.HMPREF9474_03502	NA	NA
UHGV-0209658_53	PHROG	phrog_533	portal protein	head and packaging
UHGV-0209658_53	UniRef90	UniRef90_UPI001AA0FCED	capsid protein	NA
UHGV-0209658_53	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-0209658_53	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0209658_54	PHROG	phrog_31760	NA	unknown function
UHGV-0209658_55	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0209658_55	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0209658_55	UniRef90	UniRef90_UPI00192D4B43	terminase	NA
UHGV-0209658_55	eggNOG-mapper	742740.HMPREF9474_03500	Phage terminase, large subunit, PBSX family	NA
UHGV-0209658_55	COG	COG1783	Phage terminase large subunit	NA
UHGV-0209658_55	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0209658_56	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0209658_56	UniRef90	UniRef90_UPI001AA1016E	helix-turn-helix domain-containing protein	NA
UHGV-0209658_56	eggNOG-mapper	742733.HMPREF9469_01828	transposase activity	NA
UHGV-0209658_56	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-0209658_56	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0209658_56	Structural annotation	PF07141	NA	NA
UHGV-0209658_57	PHROG	phrog_1762	NA	unknown function
UHGV-0209658_57	UniRef90	UniRef90_UPI001AA13B88	NA	NA
UHGV-0209658_57	eggNOG-mapper	397287.C807_01695	NA	NA
UHGV-0209658_57	Pfam	PF11185	NA	DUF2971
UHGV-0209658_57	COG	COG0457	Tetratricopeptide (TPR) repeat	NA
UHGV-0209658_58	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0209658_58	UniRef90	UniRef90_A0A1C6ELQ7	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-0209658_58	eggNOG-mapper	742740.HMPREF9474_03497	NA	NA
UHGV-0209658_58	Structural annotation	PF02996	NA	NA
UHGV-0209658_60	PHROG	phrog_17260	NA	unknown function
UHGV-0209658_60	eggNOG-mapper	1114964.L485_22640	NA	NA
UHGV-0209658_60	AcrCatalog	cluster_11231	NA	NA
UHGV-0209658_62	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-0209658_62	eggNOG-mapper	1235797.C816_01664	COG NOG12663 non supervised orthologous group	NA
UHGV-0209658_62	Structural annotation	PF00765, MF_02210, NF040502, COG3981	NA	NA
UHGV-0209658_64	PHROG	phrog_15077	NA	unknown function
UHGV-0209658_64	UniRef90	UniRef90_A0A1M6RQ18	RNA polymerase, alpha chain C terminal domain	NA
UHGV-0209658_64	eggNOG-mapper	742740.HMPREF9474_03494	NA	NA
UHGV-0209658_64	Structural annotation	NF038070	NA	NA
UHGV-0209658_65	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0209658_65	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0209658_65	UniRef90	UniRef90_A0A1C6HJL9	Primosomal protein DnaI	NA
UHGV-0209658_65	eggNOG-mapper	742740.HMPREF9474_03493	IstB-like ATP binding protein	NA
UHGV-0209658_65	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0209658_65	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0209658_65	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-0209658_66	PHROG	phrog_19658	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0209658_66	UniRef90	UniRef90_UPI001D090F0C	conserved phage C-terminal domain-containing protein	NA
UHGV-0209658_66	eggNOG-mapper	742740.HMPREF9474_03492	DnaD domain protein	NA
UHGV-0209658_66	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0209658_66	Structural annotation	PF03444, MF_01911, TIGR01610, COG5529	NA	NA
UHGV-0209658_67	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0209658_67	eggNOG-mapper	742740.HMPREF9474_03491	NA	NA
UHGV-0209658_67	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0209658	Yes	43,301 bps	46.48%	100.00%	0.9800
UHGV-1704822	No	10,713 bps	47.68%	27.47%	0.9793