vOTU-048516

Overview

vOTU representative UHGV-0209700

No. of genomes 2

Genome length 47,252 bps

Completeness 100.00% (complete)

Host Phascolarctobacterium A succinatutens

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048516
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 › vSUBFAM-00226 › vGENUS-00138 › vSUBGEN-00146 › vOTU-048516
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Acidaminococcales › Acidaminococcaceae › Phascolarctobacterium A › Phascolarctobacterium A succinatutens
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209700
BioSample	SAMN09781789
Genome length	47,252 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	64
CDS density	90.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209700_1	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0209700_2	UniRef90	UniRef90_A0A7M1RTM1	RNA polymerase sigma factor/ubiquitin-like protein	NA
UHGV-0209700_2	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0209700_3	KOfam	K14059	int; integrase	NA
UHGV-0209700_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0209700_3	UniRef90	UniRef90_R6X1Y3	Tyr recombinase domain-containing protein	NA
UHGV-0209700_3	eggNOG-mapper	1123250.KB908381_gene1631	Belongs to the 'phage' integrase family	NA
UHGV-0209700_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0209700_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0209700_3	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0209700_6	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0209700_6	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0209700_6	UniRef90	UniRef90_R6X1Y8	Helix-turn-helix domain protein	NA
UHGV-0209700_6	eggNOG-mapper	1151292.QEW_0725	DNA-binding helix-turn-helix protein	NA
UHGV-0209700_6	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0209700_6	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0209700_6	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0209700_9	PHROG	phrog_6058	NA	unknown function
UHGV-0209700_9	UniRef90	UniRef90_A0A0U9H7T0	Modification methylase SinI	NA
UHGV-0209700_9	eggNOG-mapper	1280689.AUJC01000011_gene1497	NA	NA
UHGV-0209700_9	Structural annotation	PF12728, TIGR01764	NA	NA
UHGV-0209700_10	Structural annotation	NF041909	NA	NA
UHGV-0209700_11	PHROG	phrog_14367	NA	unknown function
UHGV-0209700_11	UniRef90	UniRef90_R6WTN1	Peptidoglycan-binding LysM	NA
UHGV-0209700_11	eggNOG-mapper	397291.C804_02419	LysM domain	NA
UHGV-0209700_11	Pfam	PF01476	LysM domain	LysM
UHGV-0209700_11	COG	COG1388	LysM repeat	NA
UHGV-0209700_11	Structural annotation	MF_02014, NF010723, COG1388	NA	NA
UHGV-0209700_13	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209700_13	UniRef90	UniRef90_R6WGP6	Putative phage-type endonuclease	NA
UHGV-0209700_13	eggNOG-mapper	706434.HMPREF9429_00551	YqaJ viral recombinase family protein	NA
UHGV-0209700_13	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0209700_13	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0209700_13	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0209700_13	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0209700_14	UniRef90	UniRef90_R6WLK2	Conserved domain protein	NA
UHGV-0209700_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209700_14	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0209700_14	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0209700_15	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0209700_15	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0209700_15	UniRef90	UniRef90_R6XVK6	Putative phage RecT family protein	NA
UHGV-0209700_15	eggNOG-mapper	525257.HMPREF0204_11404	RecT family	NA
UHGV-0209700_15	Pfam	PF03837	RecT family	RecT
UHGV-0209700_15	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0209700_15	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0209700_15	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0209700_17	PHROG	phrog_5968	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-0209700_17	UniRef90	UniRef90_R6WTP4	N-terminal phage replisome organizer	NA
UHGV-0209700_17	eggNOG-mapper	1211817.CCAT010000007_gene1058	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-0209700_17	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0209700_17	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0209700_17	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0209700_17	Structural annotation	PF09681, TIGR01714, TIGR01446, COG3935	NA	NA
UHGV-0209700_19	eggNOG-mapper	1540092.A0A0A0RSY9_9CAUD	transferase activity, transferring alkyl or aryl (other than methyl) groups	NA
UHGV-0209700_21	UniRef90	UniRef90_A0A6N7WVF3	Restriction endonuclease subunit S	NA
UHGV-0209700_22	PHROG	phrog_2776	NA	unknown function
UHGV-0209700_22	UniRef90	UniRef90_A0A2S7ZCT0	DNA repair protein MmcB-related protein	NA
UHGV-0209700_22	Pfam	PF06319	DNA repair protein MmcB-like	MmcB-like
UHGV-0209700_22	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-0209700_26	Structural annotation	PF16857, MF_00273, NF001981, COG2157	NA	NA
UHGV-0209700_28	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0209700_28	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0209700_28	UniRef90	UniRef90_A0A316S9J1	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0209700_28	eggNOG-mapper	743719.PaelaDRAFT_5642	Endodeoxyribonuclease RusA	NA
UHGV-0209700_28	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0209700_28	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0209700_28	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0209700_29	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0209700_29	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0209700_29	UniRef90	UniRef90_A0A1Q6RQK6	Single-stranded DNA-binding protein	NA
UHGV-0209700_29	eggNOG-mapper	904314.SEVCU012_1220	Single-stranded DNA-binding protein	NA
UHGV-0209700_29	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0209700_29	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0209700_29	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0209700_29	Structural annotation	PF00436, MF_00984, TIGR00621, COG0629	NA	NA
UHGV-0209700_34	PHROG	phrog_15863	NA	unknown function
UHGV-0209700_34	UniRef90	UniRef90_R6WLL6	Cytochrome c domain-containing protein	NA
UHGV-0209700_34	eggNOG-mapper	693746.OBV_01780	DnaJ molecular chaperone homology domain	NA
UHGV-0209700_34	COG	COG2214	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	NA
UHGV-0209700_36	Structural annotation	PF13983	NA	NA
UHGV-0209700_37	UniRef90	UniRef90_UPI00103300F2	helix-turn-helix domain-containing protein	NA
UHGV-0209700_37	eggNOG-mapper	1050201.KB913034_gene791	NA	NA
UHGV-0209700_37	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209700_37	Structural annotation	PF20075, TIGR03070, COG1396	NA	NA
UHGV-0209700_39	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0209700_39	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0209700_39	UniRef90	UniRef90_UPI001D00EC11	terminase family protein	NA
UHGV-0209700_39	eggNOG-mapper	568816.Acin_1836	Terminase RNaseH-like domain	NA
UHGV-0209700_39	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0209700_39	COG	COG0507	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0209700_39	Structural annotation	PF03237, PF17289, MF_04146, TIGR01547, COG4373	NA	NA
UHGV-0209700_41	PHROG	phrog_332	head-tail adaptor	connector
UHGV-0209700_41	UniRef90	UniRef90_UPI001F3F9DD9	portal protein	NA
UHGV-0209700_41	eggNOG-mapper	568816.Acin_1834	Bacteriophage head to tail connecting protein	NA
UHGV-0209700_41	Pfam	PF12236	Bacteriophage head to tail connecting protein	Head-tail_con
UHGV-0209700_41	Structural annotation	PF12236, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-0209700_42	PHROG	phrog_528	NA	unknown function
UHGV-0209700_42	eggNOG-mapper	1401067.HMPREF0872_06805	NA	NA
UHGV-0209700_43	PHROG	phrog_458	protease	other
UHGV-0209700_43	eggNOG-mapper	568816.Acin_1832	NA	NA
UHGV-0209700_44	PHROG	phrog_212	major head protein	head and packaging
UHGV-0209700_44	UniRef90	UniRef90_A0A6J5KPX9	Major capsid protein	NA
UHGV-0209700_44	eggNOG-mapper	568816.Acin_1831	NA	NA
UHGV-0209700_44	Pfam	PF20911	Major capsid protein GP7	GP7
UHGV-0209700_44	Structural annotation	PF20911, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0209700_45	PHROG	phrog_427	NA	unknown function
UHGV-0209700_45	Structural annotation	PF21190	NA	NA
UHGV-0209700_46	PHROG	phrog_394	tail protein	tail
UHGV-0209700_46	UniRef90	UniRef90_A0A0U1KW64	NA	NA
UHGV-0209700_46	eggNOG-mapper	1123288.SOV_1c10710	NA	NA
UHGV-0209700_46	Structural annotation	PF17212	NA	NA
UHGV-0209700_47	PHROG	phrog_376	tail protein	tail
UHGV-0209700_47	UniRef90	UniRef90_A0A0U1KV93	NA	NA
UHGV-0209700_47	eggNOG-mapper	568816.Acin_1828	NA	NA
UHGV-0209700_47	Structural annotation	PF11134, MF_00923, TIGR03300, COG2706	NA	NA
UHGV-0209700_48	PHROG	phrog_308	internal virion protein	head and packaging
UHGV-0209700_48	Structural annotation	PF13420, MF_02210, NF011709, COG1247	NA	NA
UHGV-0209700_49	PHROG	phrog_418	internal virion protein	head and packaging
UHGV-0209700_49	eggNOG-mapper	568816.Acin_1826	NA	NA
UHGV-0209700_49	Structural annotation	PF16789, TIGR02971, COG3524	NA	NA
UHGV-0209700_50	UniRef90	UniRef90_A0A1Q6RQM5	SLT domain-containing protein	NA
UHGV-0209700_50	eggNOG-mapper	1123288.SOV_2c10740	NA	NA
UHGV-0209700_50	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0209700_50	Structural annotation	PF01464, COG0741	NA	NA
UHGV-0209700_51	PHROG	phrog_9880	NA	unknown function
UHGV-0209700_51	UniRef90	UniRef90_A0A1Q6RQR6	LPD3 domain-containing protein	NA
UHGV-0209700_51	eggNOG-mapper	1123288.SOV_1c10750	NA	NA
UHGV-0209700_51	Pfam	PF18798	Large polyvalent protein-associated domain 3	LPD3
UHGV-0209700_52	PHROG	phrog_1640	tail protein	tail
UHGV-0209700_52	eggNOG-mapper	1123288.SOV_1c10770	Right handed beta helix region	NA
UHGV-0209700_52	COG	COG5434	Polygalacturonase	NA
UHGV-0209700_52	Structural annotation	PF03906	NA	NA
UHGV-0209700_53	Structural annotation	PF16116	NA	NA
UHGV-0209700_54	PHROG	phrog_2837	tail protein	tail
UHGV-0209700_54	UniRef90	UniRef90_A0A1Q6R2G9	NA	NA
UHGV-0209700_54	eggNOG-mapper	1286631.X805_38770	NA	NA
UHGV-0209700_54	Pfam	PF14301	NA	DUF4376
UHGV-0209700_54	Structural annotation	PF14301	NA	NA
UHGV-0209700_55	PHROG	phrog_4105	NA	unknown function
UHGV-0209700_55	eggNOG-mapper	33035.JPJF01000043_gene996	NA	NA
UHGV-0209700_57	PHROG	phrog_99	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209700_57	UniRef90	UniRef90_UPI0013DE3CFC	HNH endonuclease	NA
UHGV-0209700_57	eggNOG-mapper	86416.Clopa_2526	AP2 domain	NA
UHGV-0209700_57	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0209700_57	Structural annotation	PF10729, PF13392	NA	NA
UHGV-0209700_58	eggNOG-mapper	1392502.JNIO01000008_gene1280	NA	NA
UHGV-0209700_58	Structural annotation	PF21277	NA	NA
UHGV-0209700_62	PHROG	phrog_21718	NA	unknown function
UHGV-0209700_63	eggNOG-mapper	476272.RUMHYD_01953	NA	NA
UHGV-0209700_64	PHROG	phrog_16490	NA	unknown function
UHGV-0209700_64	eggNOG-mapper	445972.ANACOL_01880	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0209700	Yes	47,252 bps	44.91%	100.00%	0.9803
UHGV-0180359	No	47,021 bps	44.95%	99.90%	0.9804