vOTU-048845

Overview

vOTU representative UHGV-0212084

No. of genomes 2

Genome length 43,607 bps

Completeness 100.00% (complete)

Host Eubacterium R sp000436835

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-048845
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-06629 › vGENUS-16997 › vSUBGEN-31190 › vOTU-048845
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Eubacterium R › Eubacterium R sp000436835
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0212084
BioSample	NA
Genome length	43,607 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	70
CDS density	92.04%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0212084_1	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0212084_1	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0212084_1	Structural annotation	PF13560, NF041951, COG3655	NA	NA
UHGV-0212084_2	UniRef90	UniRef90_R6JP17	Fibronectin type-III domain-containing protein	NA
UHGV-0212084_2	eggNOG-mapper	1235799.C818_04108	IgA Peptidase M64	NA
UHGV-0212084_2	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-0212084_2	COG	COG2304	Secreted protein containing bacterial Ig-like domain and vWFA domain	NA
UHGV-0212084_4	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0212084_4	eggNOG-mapper	933115.GPDM_00955	transcriptional	NA
UHGV-0212084_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0212084_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0212084_5	KOfam	K14059	int; integrase	NA
UHGV-0212084_5	PHROG	phrog_1	integrase	integration and excision
UHGV-0212084_5	UniRef90	UniRef90_A0A3D4T5B0	Tyr recombinase domain-containing protein	NA
UHGV-0212084_5	eggNOG-mapper	1161902.HMPREF0378_0144	DNA integration	NA
UHGV-0212084_5	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0212084_5	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0212084_5	Structural annotation	PF00589, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0212084_7	Pfam	PF02915	Rubrerythrin	Rubrerythrin
UHGV-0212084_8	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0212084_9	eggNOG-mapper	641112.ACOK01000103_gene525	NA	NA
UHGV-0212084_10	PHROG	phrog_21718	NA	unknown function
UHGV-0212084_13	PHROG	phrog_1194	NA	unknown function
UHGV-0212084_13	UniRef90	UniRef90_A0A0R1VMM5	NA	NA
UHGV-0212084_13	eggNOG-mapper	60520.HR47_13415	NA	NA
UHGV-0212084_13	Pfam	PF20458	NA	DUF6711
UHGV-0212084_13	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0212084_14	PHROG	phrog_1980	tail fiber protein	tail
UHGV-0212084_14	eggNOG-mapper	469596.HMPREF9488_01322	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0212084_14	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0212084_14	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0212084_14	Structural annotation	PF14594, NF033848, COG3501	NA	NA
UHGV-0212084_15	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0212084_15	eggNOG-mapper	1211844.CBLM010000023_gene980	NA	NA
UHGV-0212084_16	eggNOG-mapper	1121333.JMLH01000047_gene1011	NA	NA
UHGV-0212084_17	Pfam	PF16478	NA	DUF5055
UHGV-0212084_17	Structural annotation	PF16478	NA	NA
UHGV-0212084_18	eggNOG-mapper	1121333.JMLH01000047_gene1013	NA	NA
UHGV-0212084_18	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0212084_19	Structural annotation	PF06141, TIGR02367, COG3167	NA	NA
UHGV-0212084_20	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0212084_20	UniRef90	UniRef90_A0A847W322	HK97 gp10 family phage protein	NA
UHGV-0212084_20	eggNOG-mapper	397290.C810_01411	NA	NA
UHGV-0212084_20	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0212084_20	Structural annotation	PF17395, TIGR01725	NA	NA
UHGV-0212084_21	eggNOG-mapper	1298920.KI911353_gene2656	NA	NA
UHGV-0212084_22	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0212084_22	UniRef90	UniRef90_A0A374HKI7	DNA-packaging protein	NA
UHGV-0212084_22	eggNOG-mapper	996306.SSUR61_0983	NA	NA
UHGV-0212084_22	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0212084_22	Structural annotation	TIGR01560	NA	NA
UHGV-0212084_23	PHROG	phrog_1328	major head protein	head and packaging
UHGV-0212084_23	UniRef90	UniRef90_UPI001A9B2641	NA	NA
UHGV-0212084_23	eggNOG-mapper	665956.HMPREF1032_03619	NA	NA
UHGV-0212084_23	Pfam	PF17236	NA	DUF5309
UHGV-0212084_23	Structural annotation	PF17236, MF_04119, NF041162, COG4653	NA	NA
UHGV-0212084_24	Structural annotation	PF14265	NA	NA
UHGV-0212084_25	PHROG	phrog_14030	NA	unknown function
UHGV-0212084_25	UniRef90	UniRef90_R5BP16	SH3b domain-containing protein	NA
UHGV-0212084_25	eggNOG-mapper	1095750.HMPREF9970_2291	repeat protein	NA
UHGV-0212084_25	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0212084_25	COG	COG5263	Glucan-binding domain (YG repeat)	NA
UHGV-0212084_25	Structural annotation	PF18342, NF041850, COG4991	NA	NA
UHGV-0212084_26	PHROG	phrog_962	holin	lysis
UHGV-0212084_26	UniRef90	UniRef90_E6MGW7	Holin, phage phi LC3 family	NA
UHGV-0212084_26	eggNOG-mapper	887929.HMP0721_1251	Bacteriophage holin	NA
UHGV-0212084_26	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0212084_26	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0212084_26	COG	COG5546	NA	NA
UHGV-0212084_26	Structural annotation	COG5546	NA	NA
UHGV-0212084_27	PHROG	phrog_1863	NA	unknown function
UHGV-0212084_27	eggNOG-mapper	1203606.HMPREF1526_02027	NA	NA
UHGV-0212084_28	PHROG	phrog_19695	NA	unknown function
UHGV-0212084_28	eggNOG-mapper	476272.RUMHYD_01788	NA	NA
UHGV-0212084_29	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0212084_29	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0212084_29	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0212084_30	PHROG	phrog_64	portal protein	head and packaging
UHGV-0212084_30	UniRef90	UniRef90_UPI001D08734C	phage portal protein	NA
UHGV-0212084_30	eggNOG-mapper	1121866.AUGK01000003_gene1429	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0212084_30	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0212084_31	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0212084_31	UniRef90	UniRef90_A0A318EQM2	Putative phage terminase large subunit-like protein	NA
UHGV-0212084_31	eggNOG-mapper	1123263.AUKY01000015_gene1608	chromosome segregation	NA
UHGV-0212084_31	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0212084_31	COG	COG5410	NA	NA
UHGV-0212084_31	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0212084_32	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0212084_32	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0212084_33	PHROG	phrog_2059	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UHGV-0212084_33	UniRef90	UniRef90_A0A373Q800	Antirestriction protein ArdA	NA
UHGV-0212084_33	eggNOG-mapper	748224.HMPREF9436_02629	NA	NA
UHGV-0212084_33	Pfam	PF07275	Antirestriction protein (ArdA)	ArdA
UHGV-0212084_33	dbAPIS	APIS003	DNA mimetics, i.e. structurally and electrostatically imitate the B-form of DNA and thus function as competitive inhibitors of restriction enzymes.	NA
UHGV-0212084_33	COG	COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	NA
UHGV-0212084_33	Structural annotation	PF07275, COG4734	NA	NA
UHGV-0212084_35	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-0212084_35	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-0212084_35	UniRef90	UniRef90_UPI0011F27512	DNA translocase FtsK	NA
UHGV-0212084_35	eggNOG-mapper	1124982.MSI_15330	Belongs to the FtsK SpoIIIE SftA family	NA
UHGV-0212084_35	PADLOC	SspH_00004	SspH	SSP
UHGV-0212084_35	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-0212084_35	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-0212084_36	UniRef90	UniRef90_A0A1G0X3M4	Transcriptional regulator	NA
UHGV-0212084_36	eggNOG-mapper	1408311.JNJM01000001_gene315	Helix-turn-helix XRE-family like proteins	NA
UHGV-0212084_36	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0212084_36	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0212084_36	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-0212084_37	KOfam	K24072	xpf; positive control factor	NA
UHGV-0212084_37	PHROG	phrog_1190	RNA polymerase sigma factor	transcription regulation
UHGV-0212084_37	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0212084_38	eggNOG-mapper	1235793.C809_00539	NA	NA
UHGV-0212084_38	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0212084_41	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0212084_41	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0212084_41	UniRef90	UniRef90_R6ILQ3	Deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-0212084_41	eggNOG-mapper	1282887.AUJG01000016_gene1113	NA	NA
UHGV-0212084_41	Pfam	PF00692	dUTPase	dUTPase
UHGV-0212084_41	NCBIFam	TIGR00576.1	dUTP diphosphatase	NA
UHGV-0212084_41	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0212084_41	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-0212084_44	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0212084_44	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0212084_44	UniRef90	UniRef90_UPI0018ABA1B6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0212084_44	eggNOG-mapper	561177.ANHYDRO_01396	Endodeoxyribonuclease RusA	NA
UHGV-0212084_44	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0212084_44	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0212084_44	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0212084_45	PHROG	phrog_1233	NA	unknown function
UHGV-0212084_45	eggNOG-mapper	665950.HMPREF1025_01361	NA	NA
UHGV-0212084_46	PHROG	phrog_10714	NA	unknown function
UHGV-0212084_46	eggNOG-mapper	537007.BLAHAN_05460	NA	NA
UHGV-0212084_47	PHROG	phrog_14682	NA	unknown function
UHGV-0212084_47	eggNOG-mapper	457424.BFAG_02409	NA	NA
UHGV-0212084_49	PHROG	phrog_3136	NA	unknown function
UHGV-0212084_49	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-0212084_49	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0212084_49	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0212084_49	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0212084_52	eggNOG-mapper	1163671.JAGI01000002_gene1275	NA	NA
UHGV-0212084_55	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0212084_55	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0212084_55	UniRef90	UniRef90_R6RCD0	Putative phosphoadenosine phosphosulfate reductase	NA
UHGV-0212084_55	eggNOG-mapper	397291.C804_05723	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0212084_55	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0212084_55	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0212084_55	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-0212084_56	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0212084_56	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0212084_56	UniRef90	UniRef90_R9KEA8	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0212084_56	eggNOG-mapper	397290.C810_05213	C-5 cytosine-specific DNA methylase	NA
UHGV-0212084_56	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0212084_56	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0212084_56	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0212084_56	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0212084_56	Structural annotation	PF00145, MF_02100, TIGR00675, COG0270	NA	NA
UHGV-0212084_57	PHROG	phrog_15768	NA	unknown function
UHGV-0212084_57	UniRef90	UniRef90_UPI001BA4B312	conserved phage C-terminal domain-containing protein	NA
UHGV-0212084_57	eggNOG-mapper	556269.ACDQ01000002_gene1168	DnaD domain protein	NA
UHGV-0212084_57	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0212084_57	COG	COG3756	NA	NA
UHGV-0212084_57	Structural annotation	PF01978, MF_01819, TIGR01610, COG3355	NA	NA
UHGV-0212084_58	PHROG	phrog_2113	NA	unknown function
UHGV-0212084_58	UniRef90	UniRef90_A0A847W0Y2	HTH domain-containing protein	NA
UHGV-0212084_58	eggNOG-mapper	1298920.KI911353_gene2059	NA	NA
UHGV-0212084_58	Pfam	PF08279	HTH domain	HTH_11
UHGV-0212084_58	Structural annotation	PF21715, COG1654	NA	NA
UHGV-0212084_59	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0212084_59	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0212084_59	UniRef90	UniRef90_A0A1T4M5T3	Single-stranded DNA-binding protein	NA
UHGV-0212084_59	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0212084_59	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0212084_59	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0212084_59	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0212084_59	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0212084_59	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0212084_61	PHROG	phrog_398	NA	unknown function
UHGV-0212084_61	UniRef90	UniRef90_UPI001E4CD732	putative HNHc nuclease	NA
UHGV-0212084_61	eggNOG-mapper	1485543.JMME01000021_gene802	Putative HNHc nuclease	NA
UHGV-0212084_61	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0212084_61	Structural annotation	PF16784	NA	NA
UHGV-0212084_62	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0212084_62	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0212084_62	UniRef90	UniRef90_A0A7X5KPZ7	Lactamase_B domain-containing protein	NA
UHGV-0212084_62	eggNOG-mapper	665956.HMPREF1032_03101	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-0212084_62	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0212084_62	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0212084_62	Structural annotation	PF12706, MF_01818, TIGR03307, COG1234	NA	NA
UHGV-0212084_63	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0212084_63	UniRef90	UniRef90_R7FH02	Phage recombination protein Bet	NA
UHGV-0212084_63	eggNOG-mapper	1122173.AXVL01000067_gene1959	DNA synthesis involved in double-strand break repair via homologous recombination	NA
UHGV-0212084_63	Pfam	PF03837	RecT family	RecT
UHGV-0212084_63	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-0212084_63	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0212084_63	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0212084_64	PHROG	phrog_674	NA	unknown function
UHGV-0212084_64	UniRef90	UniRef90_A0A7X9AE52	NA	NA
UHGV-0212084_64	eggNOG-mapper	1408437.JNJN01000039_gene373	NA	NA
UHGV-0212084_64	Pfam	PF07083	NA	DUF1351
UHGV-0212084_64	Structural annotation	PF07083	NA	NA
UHGV-0212084_66	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0212084_66	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0212084_66	UniRef90	UniRef90_A0A1V5ZUU4	Single-stranded DNA-binding protein	NA
UHGV-0212084_66	eggNOG-mapper	663278.Ethha_2440	Single-stranded DNA-binding protein	NA
UHGV-0212084_66	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0212084_66	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0212084_66	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0212084_69	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0212084_69	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0212084	Yes	43,607 bps	39.78%	100.00%	0.9767
UHGV-1668411	No	10,259 bps	40.41%	12.65%	0.9820