vOTU-049661

Overview

No. of genomes 24

Genome length 32,760 bps

Completeness 100.00% (complete)

Host Faecalibacterium sp900539945

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-049661
Number of genomes	24
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00033 › vGENUS-02310 › vSUBGEN-34329 › vOTU-049661
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium › Faecalibacterium sp900539945
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0255589
BioSample	SAMD00114763
Genome length	32,760 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	52
CDS density	92.12%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0255589_1	PHROG	phrog_199	holin	lysis
UHGV-0255589_1	UniRef90	UniRef90_A0A2A6ZGX7	Holin	NA
UHGV-0255589_1	eggNOG-mapper	742740.HMPREF9474_02333	Bacteriophage holin family	NA
UHGV-0255589_1	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0255589_1	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0255589_1	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0255589_3	PHROG	phrog_21498	NA	unknown function
UHGV-0255589_3	eggNOG-mapper	78346.BRUM_0376	DNA binding	NA
UHGV-0255589_3	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0255589_3	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-0255589_4	PHROG	phrog_263	holin	lysis
UHGV-0255589_4	UniRef90	UniRef90_E2ZIC2	Holin, SPP1 family	NA
UHGV-0255589_4	eggNOG-mapper	748224.HMPREF9436_01413	SPP1 phage holin	NA
UHGV-0255589_4	Pfam	PF04688	SPP1 phage holin	Holin_SPP1
UHGV-0255589_4	NCBIFam	TIGR01592.1	phage holin	NA
UHGV-0255589_4	Structural annotation	PF04688, TIGR01592	NA	NA
UHGV-0255589_5	KOfam	K07699	spo0A; two-component system, response regulator, stage 0 sporulation protein A	NA
UHGV-0255589_5	PHROG	phrog_24603	NA	unknown function
UHGV-0255589_5	UniRef90	UniRef90_A0A291T8I8	Spo0A_C domain-containing protein	NA
UHGV-0255589_5	eggNOG-mapper	1226322.HMPREF1545_01110	Sporulation initiation factor Spo0A C terminal	NA
UHGV-0255589_5	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-0255589_5	COG	COG2197	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	NA
UHGV-0255589_5	Structural annotation	PF08769, TIGR02875	NA	NA
UHGV-0255589_6	KOfam	K14059	int; integrase	NA
UHGV-0255589_6	PHROG	phrog_1	integrase	integration and excision
UHGV-0255589_6	UniRef90	UniRef90_A0A0W7TNE8	Tyr recombinase domain-containing protein	NA
UHGV-0255589_6	eggNOG-mapper	411471.SUBVAR_05816	Belongs to the 'phage' integrase family	NA
UHGV-0255589_6	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0255589_6	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0255589_6	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0255589_7	KOfam	K07341	doc; death on curing protein	NA
UHGV-0255589_7	PHROG	phrog_577	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0255589_7	UniRef90	UniRef90_A0A143XWM7	Fido domain-containing protein	NA
UHGV-0255589_7	eggNOG-mapper	927704.SELR_20830	Fic/DOC family	NA
UHGV-0255589_7	Pfam	PF02661	Fic/DOC family	Fic
UHGV-0255589_7	COG	COG3654	Prophage maintenance system killer protein	NA
UHGV-0255589_7	Structural annotation	TIGR01550, COG3654	NA	NA
UHGV-0255589_8	UniRef90	UniRef90_R5P714	Ciab protein	NA
UHGV-0255589_8	eggNOG-mapper	1118057.CAGX01000042_gene563	bacterial-type flagellum assembly	NA
UHGV-0255589_8	COG	COG1256	Flagellar hook-associated protein FlgK	NA
UHGV-0255589_8	Structural annotation	PF10543, NF033622, COG3943	NA	NA
UHGV-0255589_9	PHROG	phrog_1847	NA	unknown function
UHGV-0255589_9	UniRef90	UniRef90_A0A3E2U209	NA	NA
UHGV-0255589_9	eggNOG-mapper	718252.FP2_06880	NA	NA
UHGV-0255589_9	Pfam	PF13250	NA	DUF4041
UHGV-0255589_9	Pfam	PF13455	Meiotically up-regulated gene 113	MUG113
UHGV-0255589_9	COG	COG0172	Seryl-tRNA synthetase	NA
UHGV-0255589_9	Structural annotation	PF13250, PF19824, MF_01506	NA	NA
UHGV-0255589_10	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0255589_10	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0255589_10	UniRef90	UniRef90_A0A3E2U313	Repressor LexA	NA
UHGV-0255589_10	eggNOG-mapper	411483.FAEPRAA2165_03041	NA	NA
UHGV-0255589_10	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0255589_10	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0255589_10	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0255589_10	Structural annotation	PF00717, PF12844, MF_00015, TIGR00498, TIGR03070, COG1974, COG1476	NA	NA
UHGV-0255589_11	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0255589_11	PHROG	phrog_5823	transcriptional regulator	transcription regulation
UHGV-0255589_11	UniRef90	UniRef90_A0A3E2U242	Helix-turn-helix domain-containing protein	NA
UHGV-0255589_11	eggNOG-mapper	888060.HMPREF9081_1958	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0255589_11	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0255589_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0255589_11	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0255589_14	eggNOG-mapper	411462.DORLON_00804	NA	NA
UHGV-0255589_16	PHROG	phrog_37789	NA	unknown function
UHGV-0255589_21	KOfam	K17080	PHB1; prohibitin 1	NA
UHGV-0255589_21	PHROG	phrog_200	lipoprotein	other
UHGV-0255589_21	UniRef90	UniRef90_A0A3A6JM18	Prohibitin family protein	NA
UHGV-0255589_21	eggNOG-mapper	748224.HMPREF9436_03073	SPFH Band 7 PHB domain protein	NA
UHGV-0255589_21	Pfam	PF01145	SPFH domain / Band 7 family	Band_7
UHGV-0255589_21	COG	COG0330	Regulator of protease activity HflC, stomatin/prohibitin superfamily	NA
UHGV-0255589_21	Structural annotation	PF01145, MF_01562, NF008181, COG0330	NA	NA
UHGV-0255589_22	Structural annotation	NF033787	NA	NA
UHGV-0255589_23	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0255589_23	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0255589_24	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0255589_24	eggNOG-mapper	411471.SUBVAR_05829	NA	NA
UHGV-0255589_24	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0255589_25	PHROG	phrog_7566	NA	unknown function
UHGV-0255589_25	eggNOG-mapper	411471.SUBVAR_05830	NA	NA
UHGV-0255589_26	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0255589_26	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0255589_26	UniRef90	UniRef90_A0A3E2U1Y5	Single-stranded DNA-binding protein	NA
UHGV-0255589_26	eggNOG-mapper	748224.HMPREF9436_00638	Single-stranded DNA-binding protein	NA
UHGV-0255589_26	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0255589_26	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0255589_26	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0255589_26	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0255589_26	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0255589_27	PHROG	phrog_15768	NA	unknown function
UHGV-0255589_27	UniRef90	UniRef90_A0A1C6HCL1	MarR family	NA
UHGV-0255589_27	eggNOG-mapper	929704.Myrod_0677	NA	NA
UHGV-0255589_27	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0255589_27	Structural annotation	PF01978, MF_01819, TIGR01610, COG3355	NA	NA
UHGV-0255589_28	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0255589_28	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0255589_28	UniRef90	UniRef90_A0A564SBR1	Replicative DNA helicase	NA
UHGV-0255589_28	eggNOG-mapper	1203606.HMPREF1526_01325	Participates in initiation and elongation during chromosome replication	NA
UHGV-0255589_28	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0255589_28	COG	COG0305	Replicative DNA helicase	NA
UHGV-0255589_28	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0255589_29	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0255589_29	UniRef90	UniRef90_A0A355KVL2	DNA cytosine methyltransferase	NA
UHGV-0255589_29	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0255589_29	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0255589_29	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0255589_30	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0255589_30	UniRef90	UniRef90_A0A3E2U224	Sigma70_r4_2 domain-containing protein	NA
UHGV-0255589_30	eggNOG-mapper	748224.HMPREF9436_01463	NA	NA
UHGV-0255589_30	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0255589_30	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA
UHGV-0255589_31	PHROG	phrog_338	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0255589_31	UniRef90	UniRef90_UPI0015F33F36	HNH endonuclease	NA
UHGV-0255589_31	eggNOG-mapper	748224.HMPREF9436_01465	NA	NA
UHGV-0255589_31	Structural annotation	PF01844	NA	NA
UHGV-0255589_32	UniRef90	UniRef90_R6GFM0	Conserved domain protein	NA
UHGV-0255589_32	Structural annotation	PF19962	NA	NA
UHGV-0255589_33	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0255589_33	UniRef90	UniRef90_UPI001F1A3C47	terminase large subunit	NA
UHGV-0255589_33	eggNOG-mapper	748224.HMPREF9436_01467	phage terminase, large subunit	NA
UHGV-0255589_33	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0255589_33	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0255589_33	Structural annotation	PF20441, PF03354, MF_04146, NF033889, COG4626	NA	NA
UHGV-0255589_34	PHROG	phrog_104	portal protein	head and packaging
UHGV-0255589_34	UniRef90	UniRef90_A0A3E2U200	Phage portal protein	NA
UHGV-0255589_34	eggNOG-mapper	748224.HMPREF9436_01468	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0255589_34	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0255589_35	PHROG	phrog_193	head maturation protease	head and packaging
UHGV-0255589_35	UniRef90	UniRef90_A0A6N8H118	CdiA_C domain-containing protein	NA
UHGV-0255589_35	eggNOG-mapper	748224.HMPREF9436_01469	NA	NA
UHGV-0255589_35	COG	COG5529	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	NA
UHGV-0255589_35	Structural annotation	PF20344	NA	NA
UHGV-0255589_37	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0255589_37	UniRef90	UniRef90_D4K444	Phage minor structural protein GP20	NA
UHGV-0255589_37	eggNOG-mapper	748224.HMPREF9436_03336	Phage minor structural protein GP20	NA
UHGV-0255589_37	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0255589_37	Structural annotation	PF06810	NA	NA
UHGV-0255589_38	PHROG	phrog_267	major head protein	head and packaging
UHGV-0255589_38	UniRef90	UniRef90_A0A4P8IA69	Phage capsid and scaffold	NA
UHGV-0255589_38	eggNOG-mapper	748224.HMPREF9436_03335	NA	NA
UHGV-0255589_38	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0255589_39	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-0255589_39	UniRef90	UniRef90_E2ZGA8	Phage protein Gp19/Gp15/Gp42	NA
UHGV-0255589_39	eggNOG-mapper	762211.BSTEL_0628	Phage protein Gp19/Gp15/Gp42	NA
UHGV-0255589_39	Structural annotation	PF09355	NA	NA
UHGV-0255589_40	PHROG	phrog_501	head closure Hc1	connector
UHGV-0255589_40	UniRef90	UniRef90_R6CEU4	NA	NA
UHGV-0255589_40	eggNOG-mapper	748224.HMPREF9436_00693	NA	NA
UHGV-0255589_40	Structural annotation	PF12206, COG5614	NA	NA
UHGV-0255589_41	PHROG	phrog_387	neck protein	connector
UHGV-0255589_41	UniRef90	UniRef90_A0A4U9XLC1	NA	NA
UHGV-0255589_41	eggNOG-mapper	748224.HMPREF9436_00694	NA	NA
UHGV-0255589_42	PHROG	phrog_123	tail terminator	connector
UHGV-0255589_42	UniRef90	UniRef90_A0A0E8ZUI3	Gp45	NA
UHGV-0255589_42	eggNOG-mapper	748224.HMPREF9436_00695	NA	NA
UHGV-0255589_42	Structural annotation	PF06141	NA	NA
UHGV-0255589_43	PHROG	phrog_117	major tail protein	tail
UHGV-0255589_43	UniRef90	UniRef90_E2ZGB2	Prophage LambdaSa1, structural protein	NA
UHGV-0255589_43	eggNOG-mapper	748224.HMPREF9436_00696	domain, Protein	NA
UHGV-0255589_43	COG	COG5492	NA	NA
UHGV-0255589_43	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0255589_44	PHROG	phrog_1526	NA	unknown function
UHGV-0255589_44	UniRef90	UniRef90_F3MWB0	NA	NA
UHGV-0255589_44	eggNOG-mapper	875454.BAEW01000017_gene1589	NA	NA
UHGV-0255589_45	Structural annotation	PF17318	NA	NA
UHGV-0255589_46	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-0255589_46	UniRef90	UniRef90_A0A564SVA6	TMP_3 domain-containing protein	NA
UHGV-0255589_46	eggNOG-mapper	748224.HMPREF9436_00699	Phage tail tape measure protein, TP901 family	NA
UHGV-0255589_46	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0255589_46	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0255589_46	COG	COG1511	NA	NA
UHGV-0255589_46	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0255589_47	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0255589_47	UniRef90	UniRef90_A0A564T4N7	Phage tail protein	NA
UHGV-0255589_47	eggNOG-mapper	748224.HMPREF9436_00700	Phage tail protein	NA
UHGV-0255589_47	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0255589_48	PHROG	phrog_538	minor tail protein	tail
UHGV-0255589_48	UniRef90	UniRef90_UPI001C0C4E4F	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0255589_48	eggNOG-mapper	748224.HMPREF9436_03324	NA	NA
UHGV-0255589_48	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0255589_48	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0255589_49	PHROG	phrog_9534	head protein	head and packaging
UHGV-0255589_49	eggNOG-mapper	748224.HMPREF9436_00702	COG NOG18825 non supervised orthologous group	NA
UHGV-0255589_49	Structural annotation	PF21567	NA	NA
UHGV-0255589_50	PHROG	phrog_1382	NA	unknown function
UHGV-0255589_50	UniRef90	UniRef90_A0A6N9P4T5	ASCH domain-containing protein	NA
UHGV-0255589_50	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0255589_50	Structural annotation	NF040910	NA	NA
UHGV-0255589_51	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0255589_51	PHROG	phrog_894	endolysin	lysis
UHGV-0255589_51	UniRef90	UniRef90_A0A1C5NY12	Zinc D-Ala-D-Ala carboxypeptidase	NA
UHGV-0255589_51	eggNOG-mapper	748224.HMPREF9436_03320	Peptidase M15	NA
UHGV-0255589_51	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0255589_51	COG	COG3108	NA	NA
UHGV-0255589_51	Structural annotation	PF05951, COG3108	NA	NA
UHGV-0255589_52	UniRef90	UniRef90_A0A6N9Q103	Holin (Fragment)	NA
UHGV-0255589_52	eggNOG-mapper	97139.C824_03357	TIGRFAM toxin secretion phage lysis holin	NA
UHGV-0255589_52	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0255589_52	COG	COG4824	Phage-related holin (Lysis protein)	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0255589	Yes	32,760 bps	58.94%	100.00%	0.9771
UHGV-1525018	No	33,420 bps	58.93%	97.98%	0.9782
UHGV-2081743	No	32,810 bps	58.82%	96.21%	0.9751
UHGV-1343270	No	32,156 bps	58.84%	94.30%	0.9779
UHGV-1391225	No	31,499 bps	59.01%	92.37%	0.9785
UHGV-1431862	No	31,134 bps	58.87%	91.28%	0.9774
UHGV-0116640	No	29,954 bps	58.87%	87.82%	0.9772
UHGV-1475560	No	29,954 bps	58.87%	87.82%	0.9772
UHGV-0099810	No	30,260 bps	59.68%	87.64%	0.9791
UHGV-1519963	No	29,543 bps	58.95%	85.01%	0.9800
UHGV-0159990	No	29,435 bps	59.43%	84.38%	0.9803
UHGV-2106156	No	27,242 bps	60.00%	79.40%	0.9775
UHGV-1509765	No	26,237 bps	60.53%	75.08%	0.9816
UHGV-1512016	No	25,824 bps	60.87%	74.00%	0.9814
UHGV-1428669	No	22,933 bps	57.29%	67.10%	0.9755
UHGV-2163894	No	22,144 bps	61.08%	63.68%	0.9788
UHGV-0111929	No	20,883 bps	61.08%	59.60%	0.9804
UHGV-0149730	No	18,462 bps	55.89%	54.01%	0.9620
UHGV-1523245	No	17,714 bps	59.69%	50.68%	0.9789
UHGV-1847116	No	15,697 bps	62.93%	46.10%	0.9802
UHGV-0154045	No	13,917 bps	62.00%	40.36%	0.9821
UHGV-0196791	No	12,705 bps	62.17%	36.62%	0.9826
UHGV-1630255	No	11,639 bps	62.22%	34.19%	0.9801
UHGV-1853134	No	10,790 bps	53.37%	31.54%	0.9726