vOTU-050298

Overview

vOTU representative UHGV-0302057

No. of genomes 2

Genome length 39,727 bps

Completeness 100.00% (complete)

Host Clostridium P perfringens

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-050298
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00248 › vSUBFAM-00936 › vGENUS-00839 › vSUBGEN-10799 › vOTU-050298
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium P › Clostridium P perfringens
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0302057
BioSample	SAMN14271015
Genome length	39,727 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	64
CDS density	90.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0302057_1	PHROG	phrog_15478	tail length tape measure protein	tail
UHGV-0302057_1	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0302057_2	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0302057_2	UniRef90	UniRef90_F8UBN0	Prophage antirepressor	NA
UHGV-0302057_2	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0302057_3	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0302057_3	UniRef90	UniRef90_F8UBI2	Putative phage tail component	NA
UHGV-0302057_3	eggNOG-mapper	999411.HMPREF1092_03310	NA	NA
UHGV-0302057_3	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0302057_3	COG	COG4722	Phage-related protein YomH	NA
UHGV-0302057_3	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0302057_4	KOfam	K02238	comEC; competence protein ComEC	NA
UHGV-0302057_4	PHROG	phrog_7043	tail protein	tail
UHGV-0302057_4	UniRef90	UniRef90_B6CXF5	Endopeptidase-endolysin	NA
UHGV-0302057_4	eggNOG-mapper	1292035.H476_1004	Prophage endopeptidase tail	NA
UHGV-0302057_4	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0302057_4	Pfam	PF00753	Metallo-beta-lactamase superfamily	Lactamase_B
UHGV-0302057_4	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0302057_4	dbAPIS	APIS001	NA	NA
UHGV-0302057_4	COG	COG4926	Phage-related protein	NA
UHGV-0302057_4	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0302057_5	UniRef90	UniRef90_A0A5H2QRS2	Endopeptidase	NA
UHGV-0302057_5	eggNOG-mapper	573061.Clocel_3531	Phage minor structural protein	NA
UHGV-0302057_5	COG	COG4926	Phage-related protein	NA
UHGV-0302057_6	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0302057_6	PHROG	phrog_435	endolysin	lysis
UHGV-0302057_6	UniRef90	UniRef90_G9J3I1	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0302057_6	eggNOG-mapper	1415774.U728_1232	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0302057_6	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0302057_6	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0302057_6	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0302057_7	UniRef90	UniRef90_F8UBN4	Small integral membrane protein	NA
UHGV-0302057_7	eggNOG-mapper	457396.CSBG_00968	COG5546 Small integral membrane protein	NA
UHGV-0302057_7	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0302057_7	COG	COG5546	NA	NA
UHGV-0302057_8	PHROG	phrog_1193	hemolysin	other
UHGV-0302057_8	UniRef90	UniRef90_A0A5H2QSB7	Recombination related exonuclease	NA
UHGV-0302057_11	PHROG	phrog_17736	NA	unknown function
UHGV-0302057_12	PHROG	phrog_17096	NA	unknown function
UHGV-0302057_13	PHROG	phrog_98	NA	unknown function
UHGV-0302057_13	UniRef90	UniRef90_UPI001ABA3BD6	YopX family protein	NA
UHGV-0302057_13	eggNOG-mapper	931276.Cspa_c26780	YopX protein	NA
UHGV-0302057_13	Pfam	PF09643	YopX protein	YopX
UHGV-0302057_13	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0302057_13	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0302057_14	PHROG	phrog_18689	NA	unknown function
UHGV-0302057_16	PHROG	phrog_18552	NA	unknown function
UHGV-0302057_17	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0302057_17	UniRef90	UniRef90_A0A5H2QSC2	DNA binding protein	NA
UHGV-0302057_17	eggNOG-mapper	946235.CAER01000065_gene2463	Antirepressor	NA
UHGV-0302057_17	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0302057_17	COG	COG3617	Prophage antirepressor	NA
UHGV-0302057_20	PHROG	phrog_16490	NA	unknown function
UHGV-0302057_20	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0302057_23	PHROG	phrog_17454	NA	unknown function
UHGV-0302057_24	PHROG	phrog_17879	NA	unknown function
UHGV-0302057_24	Structural annotation	PF00210, MF_01441, NF011597, COG1528	NA	NA
UHGV-0302057_25	PHROG	phrog_774	NA	unknown function
UHGV-0302057_25	eggNOG-mapper	397290.C810_05225	NA	NA
UHGV-0302057_26	PHROG	phrog_1048	NA	unknown function
UHGV-0302057_26	UniRef90	UniRef90_A0A849XP01	NA	NA
UHGV-0302057_26	eggNOG-mapper	411462.DORLON_00765	NA	NA
UHGV-0302057_26	Pfam	PF11195	NA	DUF2829
UHGV-0302057_26	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0302057_26	Structural annotation	PF11195	NA	NA
UHGV-0302057_27	PHROG	phrog_19908	NA	unknown function
UHGV-0302057_28	PHROG	phrog_18368	NA	unknown function
UHGV-0302057_29	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0302057_29	UniRef90	UniRef90_B6CXH7	Gp157	NA
UHGV-0302057_29	eggNOG-mapper	315749.Bcer98_2962	Siphovirus Gp157	NA
UHGV-0302057_29	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0302057_29	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0302057_30	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0302057_30	UniRef90	UniRef90_A0A1M6K3D1	ERF superfamily protein	NA
UHGV-0302057_30	eggNOG-mapper	1268072.PSAB_05935	ERF superfamily	NA
UHGV-0302057_30	Pfam	PF04404	ERF superfamily	ERF
UHGV-0302057_31	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-0302057_31	UniRef90	UniRef90_A0A6L9ENY8	ERCC4-type nuclease	NA
UHGV-0302057_31	eggNOG-mapper	673376.F2VHU9_9CAUD	nuclease activity	NA
UHGV-0302057_31	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-0302057_31	Structural annotation	PF02732, NF040956, COG1948	NA	NA
UHGV-0302057_32	PHROG	phrog_16715	NA	unknown function
UHGV-0302057_34	KOfam	K03465	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	NA
UHGV-0302057_34	PHROG	phrog_85	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0302057_34	UniRef90	UniRef90_F8UBK4	Predicted alternative thymidylate synthase	NA
UHGV-0302057_34	eggNOG-mapper	673376.F2VHV1_9CAUD	flavin adenine dinucleotide binding	NA
UHGV-0302057_34	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0302057_34	NCBIFam	TIGR02170.1	FAD-dependent thymidylate synthase	NA
UHGV-0302057_34	HAMAP	MF_01408	Flavin-dependent thymidylate synthase [thyX]	NA
UHGV-0302057_34	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0302057_35	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0302057_35	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0302057_35	UniRef90	UniRef90_F2VHV2	Single-stranded DNA-binding protein	NA
UHGV-0302057_35	eggNOG-mapper	673376.F2VHV2_9CAUD	Single-strand binding protein family	NA
UHGV-0302057_35	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0302057_35	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0302057_35	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0302057_35	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0302057_36	PHROG	phrog_27657	NA	unknown function
UHGV-0302057_37	PHROG	phrog_5558	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0302057_37	UniRef90	UniRef90_B6CXI4	XRE-like regulator	NA
UHGV-0302057_37	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0302057_38	PHROG	phrog_18098	NA	unknown function
UHGV-0302057_38	UniRef90	UniRef90_F8UBK6	CHC2 zinc finger protein	NA
UHGV-0302057_39	UniRef90	UniRef90_B6CXI7	Cytolysin	NA
UHGV-0302057_40	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0302057_40	UniRef90	UniRef90_A0A5H2QSD0	Putative nucleoside triphosphate pyrophosphohydrolase	NA
UHGV-0302057_40	eggNOG-mapper	1499683.CCFF01000005_gene41	NA	NA
UHGV-0302057_40	Structural annotation	PF01503, TIGR03188	NA	NA
UHGV-0302057_41	PHROG	phrog_18244	NA	unknown function
UHGV-0302057_42	PHROG	phrog_31157	NA	unknown function
UHGV-0302057_43	PHROG	phrog_17705	NA	unknown function
UHGV-0302057_44	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0302057_44	eggNOG-mapper	931276.Cspa_c57180	DNA-packaging protein gp3	NA
UHGV-0302057_44	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0302057_44	Structural annotation	PF16677	NA	NA
UHGV-0302057_45	PHROG	phrog_30251	terminase large subunit	head and packaging
UHGV-0302057_45	UniRef90	UniRef90_A0A8F1V777	Terminase	NA
UHGV-0302057_45	eggNOG-mapper	1522092.A0A090EUA8_9CAUD	Pfam:Terminase_6C	NA
UHGV-0302057_45	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0302057_45	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0302057_45	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0302057_45	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0302057_46	PHROG	phrog_236	nucleotide kinase	other
UHGV-0302057_46	UniRef90	UniRef90_A0A6B4UVZ1	NA	NA
UHGV-0302057_46	eggNOG-mapper	673376.F2VHW0_9CAUD	NA	NA
UHGV-0302057_46	Pfam	PF11753	NA	DUF3310
UHGV-0302057_46	Structural annotation	PF11753	NA	NA
UHGV-0302057_47	PHROG	phrog_64	portal protein	head and packaging
UHGV-0302057_47	UniRef90	UniRef90_F8UBG3	Phage portal protein SPP1	NA
UHGV-0302057_47	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0302057_47	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0302057_47	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0302057_48	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0302057_48	UniRef90	UniRef90_B6CXD5	Minor head protein	NA
UHGV-0302057_48	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-0302057_48	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0302057_48	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0302057_48	COG	COG2369	NA	NA
UHGV-0302057_48	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0302057_49	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0302057_49	UniRef90	UniRef90_A0A5H2QSD3	Putative tail component	NA
UHGV-0302057_50	PHROG	phrog_22191	NA	unknown function
UHGV-0302057_53	PHROG	phrog_16621	NA	unknown function
UHGV-0302057_54	PHROG	phrog_1313	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0302057_54	UniRef90	UniRef90_B6CXE0	Integrase	NA
UHGV-0302057_54	eggNOG-mapper	673376.F2VHW6_9CAUD	Virulence-associated protein E	NA
UHGV-0302057_54	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-0302057_54	Structural annotation	PF05272, MF_04000, NF011296, COG5545	NA	NA
UHGV-0302057_55	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0302057_55	UniRef90	UniRef90_A0A5H2QW52	Recombination related exonuclease	NA
UHGV-0302057_55	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0302057_56	PHROG	phrog_212	major head protein	head and packaging
UHGV-0302057_56	UniRef90	UniRef90_UPI001D0814F6	phage capsid protein	NA
UHGV-0302057_56	eggNOG-mapper	552396.HMPREF0863_00277	NA	NA
UHGV-0302057_56	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0302057_57	PHROG	phrog_23208	virion structural protein	head and packaging
UHGV-0302057_57	UniRef90	UniRef90_UPI0018A101F0	SGNH/GDSL hydrolase family protein	NA
UHGV-0302057_57	eggNOG-mapper	1235811.HMPREF0653_01411	GDSL-like Lipase/Acylhydrolase	NA
UHGV-0302057_57	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0302057_57	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0302057_58	PHROG	phrog_1236	head protein	head and packaging
UHGV-0302057_59	PHROG	phrog_17977	NA	unknown function
UHGV-0302057_59	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0302057_59	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0302057_60	PHROG	phrog_17405	head protein	head and packaging
UHGV-0302057_60	Structural annotation	PF11367	NA	NA
UHGV-0302057_61	PHROG	phrog_885	major tail protein	tail
UHGV-0302057_61	eggNOG-mapper	1158602.I590_02571	NA	NA
UHGV-0302057_61	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0302057_62	PHROG	phrog_18646	NA	unknown function
UHGV-0302057_62	UniRef90	UniRef90_B6CXF0	Peptidase-colicin	NA
UHGV-0302057_62	eggNOG-mapper	768704.Desmer_4456	NA	NA
UHGV-0302057_63	PHROG	phrog_33913	NA	unknown function
UHGV-0302057_63	UniRef90	UniRef90_B6CXF1	ATPase component	NA
UHGV-0302057_64	PHROG	phrog_991	tail length tape measure protein	tail
UHGV-0302057_64	UniRef90	UniRef90_B6CXF2	Tape measure protein	NA
UHGV-0302057_64	eggNOG-mapper	397288.C806_00771	Phage-related minor tail protein	NA
UHGV-0302057_64	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0302057_64	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0302057_64	COG	COG5283	Phage-related tail protein	NA
UHGV-0302057_64	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0302057	Yes	39,727 bps	30.68%	100.00%	0.9812
UHGV-0275483	No	10,663 bps	31.08%	27.22%	0.9808