vOTU-050809

Overview

No. of genomes 29

Genome length 36,552 bps

Completeness 100.00% (complete)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-050809
Number of genomes	29
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00146 › vGENUS-00309 › vSUBGEN-00807 › vOTU-050809
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0340229
BioSample	NA
Genome length	36,552 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	52
CDS density	92.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0340229_1	PHROG	phrog_2329	NA	unknown function
UHGV-0340229_1	UniRef90	UniRef90_UPI0018A8B4F7	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA
UHGV-0340229_1	Structural annotation	PF04014, COG2336	NA	NA
UHGV-0340229_2	eggNOG-mapper	478749.BRYFOR_07651	NA	NA
UHGV-0340229_2	Structural annotation	TIGR03826	NA	NA
UHGV-0340229_3	AcrCatalog	cluster_11486	NA	NA
UHGV-0340229_4	KOfam	K07273	acm; lysozyme	NA
UHGV-0340229_4	PHROG	phrog_291	endolysin	lysis
UHGV-0340229_4	UniRef90	UniRef90_D4M5A7	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	NA
UHGV-0340229_4	eggNOG-mapper	515620.EUBELI_01316	Glycoside Hydrolase Family 25-like lysozyme endolysin	NA
UHGV-0340229_4	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0340229_4	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0340229_4	Structural annotation	PF01183, NF003627, COG3757, COG5492	NA	NA
UHGV-0340229_5	Structural annotation	PF13384, NF001074, COG3677	NA	NA
UHGV-0340229_6	PHROG	phrog_37799	NA	unknown function
UHGV-0340229_6	UniRef90	UniRef90_A0A373N7C7	Protein utxA	NA
UHGV-0340229_6	eggNOG-mapper	411470.RUMGNA_02086	NA	NA
UHGV-0340229_6	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0340229_6	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0340229_6	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0340229_6	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0340229_7	PHROG	phrog_20274	NA	unknown function
UHGV-0340229_7	UniRef90	UniRef90_A0A173TUK0	Predicted membrane protein	NA
UHGV-0340229_7	eggNOG-mapper	1235799.C818_04238	Putative ABC-transporter type IV	NA
UHGV-0340229_7	Pfam	PF06541	Putative ABC-transporter type IV	ABC_trans_CmpB
UHGV-0340229_7	COG	COG4905	NA	NA
UHGV-0340229_7	Structural annotation	PF06541, COG4905	NA	NA
UHGV-0340229_8	UniRef90	UniRef90_UPI001BC63046	Acyl carrier protein	NA
UHGV-0340229_8	eggNOG-mapper	1235799.C818_04237	NA	NA
UHGV-0340229_8	Structural annotation	PF14301	NA	NA
UHGV-0340229_9	eggNOG-mapper	553973.CLOHYLEM_06551	to Mitochondrial intermediate peptidase K01410	NA
UHGV-0340229_9	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0340229_9	Structural annotation	NF012201	NA	NA
UHGV-0340229_10	PHROG	phrog_819	tail protein	tail
UHGV-0340229_10	UniRef90	UniRef90_UPI001A9A6571	collagen-like protein	NA
UHGV-0340229_10	eggNOG-mapper	877414.ATWA01000019_gene2051	NA	NA
UHGV-0340229_10	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0340229_10	Structural annotation	PF05737	NA	NA
UHGV-0340229_11	KOfam	K16628	COL7A; collagen type VII alpha	NA
UHGV-0340229_11	PHROG	phrog_819	tail protein	tail
UHGV-0340229_11	UniRef90	UniRef90_UPI0011C154AF	collagen-like protein	NA
UHGV-0340229_11	eggNOG-mapper	290402.Cbei_3387	NA	NA
UHGV-0340229_11	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0340229_12	PHROG	phrog_16164	NA	unknown function
UHGV-0340229_12	eggNOG-mapper	33035.JPJF01000093_gene2236	NA	NA
UHGV-0340229_12	Structural annotation	PF10651, NF032891	NA	NA
UHGV-0340229_13	KOfam	K07296	ADIPOQ, ACDC; adiponectin	NA
UHGV-0340229_13	PHROG	phrog_10972	tail fiber protein	tail
UHGV-0340229_13	UniRef90	UniRef90_A0A374E9Q0	Collagen-like protein	NA
UHGV-0340229_13	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0340229_13	Structural annotation	PF10651, NF007636, COG5456	NA	NA
UHGV-0340229_14	PHROG	phrog_14030	NA	unknown function
UHGV-0340229_14	UniRef90	UniRef90_A0A373N7H3	Peptidase M23	NA
UHGV-0340229_14	eggNOG-mapper	33035.JPJF01000093_gene2240	NlpC/P60 family	NA
UHGV-0340229_14	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0340229_14	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-0340229_14	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0340229_14	Structural annotation	PF18013, PF05382, NF033742, COG0791	NA	NA
UHGV-0340229_15	PHROG	phrog_13289	tail protein	tail
UHGV-0340229_15	UniRef90	UniRef90_D4M5A0	Phage minor structural protein, N-terminal region	NA
UHGV-0340229_15	eggNOG-mapper	1235798.C817_02568	Prophage endopeptidase tail	NA
UHGV-0340229_15	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0340229_15	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0340229_15	COG	COG2885	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	NA
UHGV-0340229_15	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0340229_16	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0340229_16	UniRef90	UniRef90_UPI000E50043B	phage tail protein	NA
UHGV-0340229_16	eggNOG-mapper	1235798.C817_04593	phage tail	NA
UHGV-0340229_16	COG	COG4722	Phage-related protein YomH	NA
UHGV-0340229_16	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0340229_17	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0340229_17	UniRef90	UniRef90_A0A373N7M8	PhageMin_Tail domain-containing protein	NA
UHGV-0340229_17	eggNOG-mapper	1035184.HMPREF1042_1328	Phage tail tape measure protein	NA
UHGV-0340229_17	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0340229_17	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0340229_17	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0340229_20	PHROG	phrog_88	major tail protein	tail
UHGV-0340229_20	UniRef90	UniRef90_D4M596	Phage major tail protein, phi13 family	NA
UHGV-0340229_20	Pfam	PF04630	Phage tail tube protein	Phage_TTP_1
UHGV-0340229_20	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0340229_20	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0340229_21	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0340229_21	UniRef90	UniRef90_D4M595	Phage protein, HK97 gp10 family	NA
UHGV-0340229_21	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0340229_21	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-0340229_22	Structural annotation	PF05657	NA	NA
UHGV-0340229_23	UniRef90	UniRef90_D4M593	Phage head-tail adaptor, putative, SPP1 family	NA
UHGV-0340229_23	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0340229_23	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0340229_25	PHROG	phrog_10	major head protein	head and packaging
UHGV-0340229_25	UniRef90	UniRef90_D4M591	Phage capsid family	NA
UHGV-0340229_25	eggNOG-mapper	1232452.BAIB02000007_gene1625	Phage capsid family	NA
UHGV-0340229_25	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0340229_25	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0340229_25	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0340229_25	Structural annotation	PF05065, TIGR01554, COG4653	NA	NA
UHGV-0340229_26	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0340229_26	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0340229_26	UniRef90	UniRef90_D4M590	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0340229_26	eggNOG-mapper	1235792.C808_00085	Clp protease	NA
UHGV-0340229_26	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0340229_26	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0340229_26	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0340229_27	PHROG	phrog_12	portal protein	head and packaging
UHGV-0340229_27	UniRef90	UniRef90_UPI00156D5DC9	phage portal protein	NA
UHGV-0340229_27	eggNOG-mapper	1232452.BAIB02000007_gene1627	Phage portal protein, HK97 family	NA
UHGV-0340229_27	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0340229_27	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0340229_27	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0340229_28	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0340229_28	UniRef90	UniRef90_D4M588	Phage terminase-like protein, large subunit	NA
UHGV-0340229_28	eggNOG-mapper	1232452.BAIB02000007_gene1629	Phage terminase-like protein large subunit	NA
UHGV-0340229_28	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0340229_28	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0340229_28	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0340229_28	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0340229_29	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0340229_29	UniRef90	UniRef90_A0A1C5LZF0	Phage terminase, small subunit	NA
UHGV-0340229_29	eggNOG-mapper	1211817.CCAT010000008_gene938	Phage terminase, small subunit	NA
UHGV-0340229_29	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0340229_29	COG	COG5484	NA	NA
UHGV-0340229_29	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0340229_30	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0340229_30	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0340229_30	UniRef90	UniRef90_D4M587	HNH endonuclease	NA
UHGV-0340229_30	eggNOG-mapper	1232452.BAIB02000007_gene1631	HNH nucleases	NA
UHGV-0340229_30	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0340229_30	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0340229_30	Structural annotation	PF09889, COG4068	NA	NA
UHGV-0340229_31	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0340229_31	UniRef90	UniRef90_UPI001899709D	NA	NA
UHGV-0340229_31	eggNOG-mapper	658655.HMPREF0988_02569	sigma factor activity	NA
UHGV-0340229_31	Pfam	PF07374	NA	DUF1492
UHGV-0340229_31	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0340229_31	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-0340229_33	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0340229_33	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0340229_33	UniRef90	UniRef90_A0A844KFT8	Helix-turn-helix domain-containing protein	NA
UHGV-0340229_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0340229_33	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0340229_35	PHROG	phrog_7566	NA	unknown function
UHGV-0340229_35	eggNOG-mapper	665950.HMPREF1025_02547	NA	NA
UHGV-0340229_36	eggNOG-mapper	1196322.A370_05726	NA	NA
UHGV-0340229_37	PHROG	phrog_15077	NA	unknown function
UHGV-0340229_37	UniRef90	UniRef90_A0A3A6HZA9	NA	NA
UHGV-0340229_37	eggNOG-mapper	1280698.AUJS01000007_gene1019	NA	NA
UHGV-0340229_37	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0340229_38	PHROG	phrog_8470	NA	unknown function
UHGV-0340229_38	UniRef90	UniRef90_UPI001C01E393	PcfJ domain-containing protein	NA
UHGV-0340229_38	eggNOG-mapper	1280698.AUJS01000007_gene1018	NA	NA
UHGV-0340229_38	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0340229_38	Structural annotation	PF14284	NA	NA
UHGV-0340229_39	PHROG	phrog_4433	NA	unknown function
UHGV-0340229_39	eggNOG-mapper	1280698.AUJS01000007_gene1017	NA	NA
UHGV-0340229_40	eggNOG-mapper	1280698.AUJS01000007_gene1016	NA	NA
UHGV-0340229_41	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0340229_41	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0340229_41	UniRef90	UniRef90_D4M578	Ribonuclease HI	NA
UHGV-0340229_41	eggNOG-mapper	665950.HMPREF1025_02551	RNase H	NA
UHGV-0340229_41	Pfam	PF00075	RNase H	RNase_H
UHGV-0340229_41	COG	COG0328	Ribonuclease HI	NA
UHGV-0340229_41	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0340229_42	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0340229_42	eggNOG-mapper	665950.HMPREF1025_02552	NA	NA
UHGV-0340229_42	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0340229_46	Structural annotation	PF20037, COG3212	NA	NA
UHGV-0340229_47	Structural annotation	COG1321	NA	NA
UHGV-0340229_49	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0340229_49	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0340229_49	UniRef90	UniRef90_A0A1Q6K9L5	Transcriptional regulator	NA
UHGV-0340229_49	eggNOG-mapper	1280698.AUJS01000007_gene1002	Helix-turn-helix XRE-family like proteins	NA
UHGV-0340229_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0340229_49	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0340229_49	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0340229_50	KOfam	K10716	kch, trkA, mthK, pch; voltage-gated potassium channel	NA
UHGV-0340229_50	PHROG	phrog_7872	NA	unknown function
UHGV-0340229_50	UniRef90	UniRef90_D4M567	Ion channel	NA
UHGV-0340229_50	eggNOG-mapper	411459.RUMOBE_00964	Ion channel	NA
UHGV-0340229_50	Pfam	PF07885	Ion channel	Ion_trans_2
UHGV-0340229_50	COG	COG1226	Voltage-gated potassium channel Kch	NA
UHGV-0340229_50	Structural annotation	PF07885, NF040645	NA	NA
UHGV-0340229_51	PHROG	phrog_10934	NA	unknown function
UHGV-0340229_51	eggNOG-mapper	742722.HMPREF9463_00385	NA	NA
UHGV-0340229_52	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0340229_52	PHROG	phrog_95	integrase	integration and excision
UHGV-0340229_52	UniRef90	UniRef90_A0A374E9M4	Recombinase family protein	NA
UHGV-0340229_52	eggNOG-mapper	97139.C824_00068	Recombinase	NA
UHGV-0340229_52	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0340229_52	Pfam	PF07508	Recombinase	Recombinase
UHGV-0340229_52	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0340229_52	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0340229	Yes	36,552 bps	42.82%	100.00%	0.9790
UHGV-1450594	No	37,157 bps	42.34%	99.90%	0.9795
UHGV-2035078	No	37,011 bps	42.79%	99.90%	0.9805
UHGV-2018906	No	36,744 bps	42.91%	99.90%	0.9751
UHGV-0085121	No	36,701 bps	42.93%	99.90%	0.9786
UHGV-2079449	No	36,620 bps	42.81%	99.90%	0.9777
UHGV-1507408	No	36,510 bps	42.83%	99.90%	0.9800
UHGV-0123931	No	36,479 bps	42.81%	99.90%	0.9800
UHGV-2039528	No	36,478 bps	42.83%	99.90%	0.9750
UHGV-2138230	No	36,104 bps	42.76%	99.90%	0.9715
UHGV-0122000	No	35,360 bps	43.00%	98.76%	0.9767
UHGV-1526776	No	34,954 bps	42.75%	97.65%	0.9806
UHGV-0078431	No	32,667 bps	42.65%	92.24%	0.9770
UHGV-2095068	No	33,024 bps	43.01%	92.23%	0.9803
UHGV-1514101	No	29,804 bps	43.24%	83.51%	0.9824
UHGV-1459489	No	24,069 bps	42.31%	67.85%	0.9796
UHGV-0241075	No	22,555 bps	42.49%	62.93%	0.9744
UHGV-1428678	No	21,654 bps	43.22%	61.32%	0.9812
UHGV-1460603	No	21,445 bps	42.84%	60.75%	0.9823
UHGV-0262520	No	20,311 bps	43.22%	57.79%	0.9825
UHGV-1440593	No	20,213 bps	43.26%	57.26%	0.9821
UHGV-1482542	No	19,460 bps	42.85%	55.10%	0.9816
UHGV-1583422	No	17,003 bps	43.29%	48.34%	0.9824
UHGV-1594736	No	16,791 bps	43.13%	47.76%	0.9816
UHGV-2136986	No	14,673 bps	43.43%	41.14%	0.9726
UHGV-2082095	No	12,983 bps	43.77%	36.35%	0.9819
UHGV-1877874	No	12,328 bps	43.67%	34.44%	0.9817
UHGV-1723687	No	10,557 bps	43.96%	27.00%	0.9795
UHGV-1719704	No	10,517 bps	44.10%	26.90%	0.9795