vOTU-050885

Overview

No. of genomes 26

Genome length 40,661 bps

Completeness 100.00% (complete)

Host Eubacterium R sp000436835

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-050885
Number of genomes	26
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-02743 › vGENUS-09975 › vSUBGEN-12506 › vOTU-050885
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Eubacterium R › Eubacterium R sp000436835
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0345315
BioSample	SAMN12751420
Genome length	40,661 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	57
CDS density	93.02%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0345315_1	KOfam	K14059	int; integrase	NA
UHGV-0345315_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0345315_1	UniRef90	UniRef90_A0A316RE68	Tyr recombinase domain-containing protein	NA
UHGV-0345315_1	eggNOG-mapper	1161902.HMPREF0378_0144	DNA integration	NA
UHGV-0345315_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0345315_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0345315_1	Structural annotation	PF00589, PF13102, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0345315_2	PHROG	phrog_20233	NA	unknown function
UHGV-0345315_2	eggNOG-mapper	97139.C824_00758	NA	NA
UHGV-0345315_3	PHROG	phrog_87	metallo-protease	other
UHGV-0345315_3	UniRef90	UniRef90_A0A316RCR6	Peptidase_M78 domain-containing protein	NA
UHGV-0345315_3	eggNOG-mapper	1507.HMPREF0262_00423	IrrE N-terminal-like domain	NA
UHGV-0345315_3	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0345315_3	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0345315_3	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0345315_4	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0345315_4	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0345315_4	UniRef90	UniRef90_R5R078	HTH cro/C1-type domain-containing protein	NA
UHGV-0345315_4	eggNOG-mapper	536233.CLO_1401	transcriptional regulator	NA
UHGV-0345315_4	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0345315_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0345315_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0345315_4	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0345315_5	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0345315_5	UniRef90	UniRef90_UPI0018E38DB7	helix-turn-helix domain-containing protein	NA
UHGV-0345315_5	eggNOG-mapper	997350.HMPREF9129_1691	PFAM Helix-turn-helix	NA
UHGV-0345315_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0345315_5	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0345315_8	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0345315_8	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-0345315_8	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0345315_10	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0345315_10	UniRef90	UniRef90_R6ISF1	NA	NA
UHGV-0345315_10	eggNOG-mapper	1029823.AFIE01000007_gene1906	NA	NA
UHGV-0345315_10	Pfam	PF06356	NA	DUF1064
UHGV-0345315_10	Structural annotation	PF06356, NF033179	NA	NA
UHGV-0345315_11	PHROG	phrog_24518	NA	unknown function
UHGV-0345315_11	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-0345315_12	Pfam	PF14058	PcfK-like protein	PcfK
UHGV-0345315_13	PHROG	phrog_8470	NA	unknown function
UHGV-0345315_13	UniRef90	UniRef90_A0A238ZSA1	PcfJ-like protein	NA
UHGV-0345315_13	eggNOG-mapper	742740.HMPREF9474_03121	PcfJ-like protein	NA
UHGV-0345315_13	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0345315_13	Structural annotation	PF14284	NA	NA
UHGV-0345315_14	PHROG	phrog_15609	NA	unknown function
UHGV-0345315_14	UniRef90	UniRef90_A0A6N7XVA9	NA	NA
UHGV-0345315_14	eggNOG-mapper	641112.ACOK01000073_gene2872	NA	NA
UHGV-0345315_14	Pfam	PF11300	NA	DUF3102
UHGV-0345315_14	Structural annotation	PF11300, NF038070	NA	NA
UHGV-0345315_15	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0345315_15	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-0345315_15	UniRef90	UniRef90_UPI001B3C6DA9	N-6 DNA methylase	NA
UHGV-0345315_15	eggNOG-mapper	1444306.JFZC01000034_gene2643	type I restriction-modification system	NA
UHGV-0345315_15	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-0345315_15	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0345315_15	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0345315_15	Structural annotation	PF02384, MF_01872, TIGR00497, COG0286	NA	NA
UHGV-0345315_16	Structural annotation	PF09871, COG4014	NA	NA
UHGV-0345315_17	eggNOG-mapper	1232449.BAHV02000018_gene1537	NA	NA
UHGV-0345315_19	PHROG	phrog_10714	NA	unknown function
UHGV-0345315_22	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0345315_22	UniRef90	UniRef90_A0A7U9S1Q6	Sigma70_r4_2 domain-containing protein	NA
UHGV-0345315_22	eggNOG-mapper	478749.BRYFOR_07530	NA	NA
UHGV-0345315_22	Structural annotation	PF07374, MF_00245, TIGR02984, COG2739	NA	NA
UHGV-0345315_23	KOfam	K04078	groES, HSPE1; chaperonin GroES	NA
UHGV-0345315_23	PHROG	phrog_3188	co-chaperonin GroES	other
UHGV-0345315_23	UniRef90	UniRef90_UPI000C06CB4D	co-chaperone GroES	NA
UHGV-0345315_23	eggNOG-mapper	760011.Spico_0631	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter	NA
UHGV-0345315_23	Pfam	PF00166	Chaperonin 10 Kd subunit	Cpn10
UHGV-0345315_23	COG	COG0234	Co-chaperonin GroES (HSP10)	NA
UHGV-0345315_23	Structural annotation	PF00166, MF_00580, NF001531, COG0234	NA	NA
UHGV-0345315_27	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-0345315_27	UniRef90	UniRef90_E5VKE3	SLIT-ROBO Rho GTPase-activating protein 3	NA
UHGV-0345315_27	eggNOG-mapper	1235835.C814_01177	NA	NA
UHGV-0345315_27	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0345315_27	Structural annotation	PF07471, TIGR01764, COG4220	NA	NA
UHGV-0345315_28	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-0345315_28	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-0345315_28	UniRef90	UniRef90_A0A3D5LV46	Terminase	NA
UHGV-0345315_28	eggNOG-mapper	138119.DSY2184	Phage terminase large subunit (GpA)	NA
UHGV-0345315_28	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-0345315_28	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-0345315_28	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-0345315_28	HAMAP	MF_04144	Terminase, large subunit	NA
UHGV-0345315_28	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-0345315_29	PHROG	phrog_118	head-tail adaptor	connector
UHGV-0345315_29	UniRef90	UniRef90_A0A316SI17	Peptidylprolyl isomerase	NA
UHGV-0345315_29	eggNOG-mapper	411470.RUMGNA_00226	NA	NA
UHGV-0345315_29	Structural annotation	PF19645	NA	NA
UHGV-0345315_30	PHROG	phrog_21	portal protein	head and packaging
UHGV-0345315_30	UniRef90	UniRef90_E5VKE0	Lambda family phage portal protein	NA
UHGV-0345315_30	eggNOG-mapper	887325.HMPREF0381_0384	Phage portal protein, lambda family	NA
UHGV-0345315_30	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-0345315_30	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-0345315_30	COG	COG5511	Phage capsid protein	NA
UHGV-0345315_30	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-0345315_31	KOfam	K06904	NA	NA
UHGV-0345315_31	PHROG	phrog_4523	major head and protease protein	head and packaging
UHGV-0345315_31	UniRef90	UniRef90_UPI0005509110	HK97 family phage prohead protease	NA
UHGV-0345315_31	eggNOG-mapper	1211817.CCAT010000013_gene3185	Caudovirus prohead serine protease	NA
UHGV-0345315_31	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0345315_31	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0345315_31	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0345315_32	PHROG	phrog_4523	major head and protease protein	head and packaging
UHGV-0345315_32	UniRef90	UniRef90_A0A413BFL7	Mu-like_gpT domain-containing protein	NA
UHGV-0345315_32	eggNOG-mapper	1415774.U728_500	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides	NA
UHGV-0345315_32	Pfam	PF10124	Mu-like prophage major head subunit gpT	Mu-like_gpT
UHGV-0345315_32	COG	COG3087	Cell division protein FtsN	NA
UHGV-0345315_32	Structural annotation	COG4397	NA	NA
UHGV-0345315_33	PHROG	phrog_122	head decoration	head and packaging
UHGV-0345315_33	UniRef90	UniRef90_A0A2A7AQS9	DNA breaking-rejoining protein	NA
UHGV-0345315_33	eggNOG-mapper	887325.HMPREF0381_0387	NA	NA
UHGV-0345315_33	Pfam	PF09956	NA	DUF2190
UHGV-0345315_33	Structural annotation	PF09956, COG5471	NA	NA
UHGV-0345315_34	PHROG	phrog_34087	NA	unknown function
UHGV-0345315_34	eggNOG-mapper	887325.HMPREF0381_0388	NA	NA
UHGV-0345315_35	PHROG	phrog_2551	minor tail protein	tail
UHGV-0345315_35	eggNOG-mapper	411470.RUMGNA_00232	ATP-binding sugar transporter from pro-phage	NA
UHGV-0345315_35	Structural annotation	PF13856	NA	NA
UHGV-0345315_36	PHROG	phrog_27	tail completion or Neck1 protein	connector
UHGV-0345315_36	UniRef90	UniRef90_UPI001C3BDE3A	Phage tail protein	NA
UHGV-0345315_36	eggNOG-mapper	478749.BRYFOR_07541	NA	NA
UHGV-0345315_36	Pfam	PF06763	Prophage minor tail protein Z (GPZ)	Minor_tail_Z
UHGV-0345315_36	Structural annotation	PF06763	NA	NA
UHGV-0345315_37	PHROG	phrog_2581	virion structural protein	head and packaging
UHGV-0345315_37	eggNOG-mapper	411470.RUMGNA_00234	NA	NA
UHGV-0345315_37	Structural annotation	PF08873	NA	NA
UHGV-0345315_38	KOfam	K06907	NA	NA
UHGV-0345315_38	PHROG	phrog_23	tail sheath	tail
UHGV-0345315_38	UniRef90	UniRef90_A0A173WPQ5	Phage tail sheath protein	NA
UHGV-0345315_38	eggNOG-mapper	887325.HMPREF0381_0393	COG3497 Phage tail sheath protein FI	NA
UHGV-0345315_38	COG	COG3497	Phage tail sheath protein FI	NA
UHGV-0345315_38	Structural annotation	PF10758, TIGR03355, COG3497	NA	NA
UHGV-0345315_39	KOfam	K06908	NA	NA
UHGV-0345315_39	PHROG	phrog_55	head closure	connector
UHGV-0345315_39	UniRef90	UniRef90_A0A3P6JS79	Phage tail tube protein FII	NA
UHGV-0345315_39	eggNOG-mapper	610130.Closa_0847	Phage tail tube protein FII	NA
UHGV-0345315_39	Pfam	PF04985	Phage tail tube protein FII	Phage_tube
UHGV-0345315_39	COG	COG3498	Phage tail tube protein FII	NA
UHGV-0345315_39	Structural annotation	PF04985, TIGR01611, COG3498	NA	NA
UHGV-0345315_40	PHROG	phrog_3140	tail assembly chaperone	tail
UHGV-0345315_40	UniRef90	UniRef90_UPI0013794F6E	phage tail assembly protein	NA
UHGV-0345315_40	eggNOG-mapper	693746.OBV_22800	Phage tail assembly chaperone proteins, E, or 41 or 14	NA
UHGV-0345315_40	Structural annotation	PF10109	NA	NA
UHGV-0345315_41	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0345315_41	UniRef90	UniRef90_A0A1M7SMG0	Phage tail tape measure protein, TP901 family, core region	NA
UHGV-0345315_41	eggNOG-mapper	478749.BRYFOR_07547	Phage tail tape measure protein, TP901 family	NA
UHGV-0345315_41	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0345315_41	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0345315_41	COG	COG5283	Phage-related tail protein	NA
UHGV-0345315_41	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0345315_42	UniRef90	UniRef90_A0A7X5D9R3	Phage tail protein	NA
UHGV-0345315_42	eggNOG-mapper	411463.EUBVEN_00435	Phage Tail Protein X	NA
UHGV-0345315_42	COG	COG5004	P2-like prophage tail protein X	NA
UHGV-0345315_42	Structural annotation	PF05489, TIGR02899, COG5004	NA	NA
UHGV-0345315_43	KOfam	K06905	NA	NA
UHGV-0345315_43	PHROG	phrog_52	tail protein	tail
UHGV-0345315_43	UniRef90	UniRef90_UPI001EE59FE1	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0345315_43	eggNOG-mapper	411470.RUMGNA_00242	COG3500 Phage protein D	NA
UHGV-0345315_43	COG	COG3500	NA	NA
UHGV-0345315_43	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0345315_44	UniRef90	UniRef90_A0A3P6JP86	Phage baseplate assembly protein V	NA
UHGV-0345315_44	eggNOG-mapper	411470.RUMGNA_00243	Baseplate assembly protein	NA
UHGV-0345315_44	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-0345315_45	PHROG	phrog_76	tail protein	tail
UHGV-0345315_45	UniRef90	UniRef90_A0A6L9HIG7	Phage tail protein	NA
UHGV-0345315_45	eggNOG-mapper	693746.OBV_22760	Phage P2 GpU	NA
UHGV-0345315_45	Pfam	PF06995	Phage P2 GpU	Phage_P2_GpU
UHGV-0345315_45	COG	COG3499	NA	NA
UHGV-0345315_45	Structural annotation	PF06995, TIGR01633, COG3499	NA	NA
UHGV-0345315_46	UniRef90	UniRef90_UPI0018CF747C	GPW/gp25 family protein	NA
UHGV-0345315_46	eggNOG-mapper	1501230.ET33_26370	GPW Gp25 family protein	NA
UHGV-0345315_46	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0345315_47	PHROG	phrog_6	baseplate protein	tail
UHGV-0345315_47	UniRef90	UniRef90_UPI00156E2580	baseplate J/gp47 family protein	NA
UHGV-0345315_47	eggNOG-mapper	411470.RUMGNA_00246	NA	NA
UHGV-0345315_47	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0345315_47	COG	COG3948	Phage-related baseplate assembly protein	NA
UHGV-0345315_47	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3948	NA	NA
UHGV-0345315_48	PHROG	phrog_14404	baseplate protein	tail
UHGV-0345315_48	UniRef90	UniRef90_UPI00143A9FBF	phage tail protein I	NA
UHGV-0345315_48	eggNOG-mapper	478749.BRYFOR_07554	Phage tail protein (Tail_P2_I)	NA
UHGV-0345315_48	Pfam	PF09684	Phage tail protein (Tail_P2_I)	Tail_P2_I
UHGV-0345315_48	NCBIFam	TIGR01634.1	phage tail protein I	NA
UHGV-0345315_48	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-0345315_48	Structural annotation	PF09684, TIGR01634, COG4385	NA	NA
UHGV-0345315_49	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0345315_49	eggNOG-mapper	1122172.KB890259_gene1398	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0345315_49	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0345315_49	Structural annotation	PF12571, PF08931	NA	NA
UHGV-0345315_51	KOfam	K10268	FBXL2_20; F-box and leucine-rich repeat protein 2/20	NA
UHGV-0345315_51	PHROG	phrog_22899	NA	unknown function
UHGV-0345315_51	Pfam	PF03382	NA	DUF285
UHGV-0345315_51	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0345315_51	NCBIFam	TIGR02167.1	bacterial surface protein 26-residue repeat	NA
UHGV-0345315_51	Structural annotation	PF03382	NA	NA
UHGV-0345315_52	PHROG	phrog_1863	NA	unknown function
UHGV-0345315_52	eggNOG-mapper	1203606.HMPREF1526_02027	NA	NA
UHGV-0345315_53	PHROG	phrog_18218	NA	unknown function
UHGV-0345315_53	eggNOG-mapper	1378168.N510_02472	NA	NA
UHGV-0345315_54	UniRef90	UniRef90_A0A3D4CAN7	SH3b domain-containing protein	NA
UHGV-0345315_54	eggNOG-mapper	717606.PaecuDRAFT_1762	Papain-like cysteine protease AvrRpt2	NA
UHGV-0345315_54	Pfam	PF13529	Peptidase_C39 like family	Peptidase_C39_2
UHGV-0345315_54	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0345315_54	COG	COG0768	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	NA
UHGV-0345315_54	Structural annotation	PF03412, PF08239, NF040678, COG3807, COG3271	NA	NA
UHGV-0345315_55	PHROG	phrog_10678	NA	unknown function
UHGV-0345315_56	eggNOG-mapper	411459.RUMOBE_01706	NA	NA
UHGV-0345315_56	Pfam	PF01381	Helix-turn-helix	HTH_3

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0345315	Yes	40,661 bps	37.04%	100.00%	0.9612
UHGV-2064467	No	51,053 bps	37.15%	99.90%	0.9569
UHGV-2047123	No	51,027 bps	37.17%	99.90%	0.9580
UHGV-2060597	No	51,027 bps	37.17%	99.90%	0.9443
UHGV-2075583	No	51,027 bps	37.17%	99.90%	0.9443
UHGV-2119411	No	51,027 bps	37.17%	99.90%	0.9443
UHGV-2145761	No	51,027 bps	37.17%	99.90%	0.9580
UHGV-2146005	No	51,027 bps	37.17%	99.90%	0.9580
UHGV-2152712	No	51,027 bps	37.17%	99.90%	0.9443
UHGV-1936386	No	50,165 bps	37.18%	99.90%	0.9572
UHGV-2088159	No	50,165 bps	37.19%	99.90%	0.9567
UHGV-2224360	No	49,873 bps	37.10%	99.90%	0.9568
UHGV-0089307	No	46,168 bps	36.98%	96.05%	0.9599
UHGV-0086496	No	52,060 bps	37.38%	84.10%	0.9470
UHGV-2134931	No	51,663 bps	37.39%	83.52%	0.9453
UHGV-2120459	No	38,541 bps	37.19%	80.23%	0.9640
UHGV-0203923	No	37,313 bps	37.26%	77.74%	0.9716
UHGV-2164125	No	37,185 bps	37.24%	77.51%	0.9527
UHGV-0112959	No	37,315 bps	37.65%	77.39%	0.9495
UHGV-0189458	No	31,100 bps	37.82%	64.50%	0.9480
UHGV-0076070	No	28,211 bps	37.89%	58.51%	0.9595
UHGV-0286185	No	16,202 bps	35.08%	44.72%	0.9528
UHGV-0057012	No	16,247 bps	35.07%	38.47%	0.9655
UHGV-1924012	No	11,580 bps	35.36%	27.42%	0.8964
UHGV-2143943	No	11,562 bps	37.61%	14.73%	0.7736
UHGV-1343655	No	10,043 bps	37.51%	10.76%	0.8180