vOTU-051087

Overview

No. of genomes 16

Genome length 34,727 bps

Completeness 100.00% (complete)

Host Erysipelatoclostridium ramosum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-051087
Number of genomes	16
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-01076 › vGENUS-01346 › vSUBGEN-22040 › vOTU-051087
Host taxonomy	Bacteria › Firmicutes › Bacilli › Erysipelotrichales › Coprobacillaceae › Erysipelatoclostridium › Erysipelatoclostridium ramosum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0362195
BioSample	SAMN06016352
Genome length	34,727 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	56
CDS density	93.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0362195_1	AcrCatalog	cluster_200940	NA	NA
UHGV-0362195_2	eggNOG-mapper	908337.HMPREF9257_0550	NA	NA
UHGV-0362195_3	PHROG	phrog_22292	NA	unknown function
UHGV-0362195_3	eggNOG-mapper	1232446.BAIE02000002_gene811	NA	NA
UHGV-0362195_4	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-0362195_4	UniRef90	UniRef90_A0A6N3AFA8	NA	NA
UHGV-0362195_4	eggNOG-mapper	39103.U5U430_9CAUD	NA	NA
UHGV-0362195_4	Pfam	PF12961	NA	DUF3850
UHGV-0362195_4	Structural annotation	PF12961, MF_00684, NF003443, COG4043	NA	NA
UHGV-0362195_5	PHROG	phrog_7566	NA	unknown function
UHGV-0362195_5	eggNOG-mapper	1304866.K413DRAFT_1198	NA	NA
UHGV-0362195_6	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0362195_6	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0362195_6	UniRef90	UniRef90_U3PDU0	Putative Holliday junction resolvase	NA
UHGV-0362195_6	eggNOG-mapper	1399942.U3PDU0_9CAUD	magnesium ion binding	NA
UHGV-0362195_6	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0362195_6	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0362195_7	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0362195_7	eggNOG-mapper	428127.EUBDOL_01246	NA	NA
UHGV-0362195_7	Structural annotation	PF05772	NA	NA
UHGV-0362195_8	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0362195_8	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0362195_8	UniRef90	UniRef90_A0A3E3EF61	Single-stranded DNA-binding protein	NA
UHGV-0362195_8	eggNOG-mapper	1232446.BAIE02000064_gene3707	Single-strand binding protein family	NA
UHGV-0362195_8	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0362195_8	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0362195_8	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0362195_8	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0362195_8	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0362195_9	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0362195_9	UniRef90	UniRef90_A0A6N2YYW1	ERF superfamily protein	NA
UHGV-0362195_9	eggNOG-mapper	386415.NT01CX_2192	ERF superfamily	NA
UHGV-0362195_9	Pfam	PF04404	ERF superfamily	ERF
UHGV-0362195_9	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0362195_12	Structural annotation	PF11417	NA	NA
UHGV-0362195_13	PHROG	phrog_4707	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0362195_13	eggNOG-mapper	1122172.KB890259_gene1441	NA	NA
UHGV-0362195_13	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0362195_13	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0362195_13	Structural annotation	PF04492, MF_01819, NF040939, COG3355	NA	NA
UHGV-0362195_14	UniRef90	UniRef90_A0A7U9GQY0	HTH_17 domain-containing protein	NA
UHGV-0362195_14	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0362195_14	COG	COG2452	Predicted site-specific integrase-resolvase	NA
UHGV-0362195_15	PHROG	phrog_2113	NA	unknown function
UHGV-0362195_17	UniRef90	UniRef90_UPI000E4A43B6	transcriptional regulator	NA
UHGV-0362195_17	eggNOG-mapper	1302863.I872_10490	sequence-specific DNA binding	NA
UHGV-0362195_17	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0362195_17	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0362195_18	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0362195_18	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0362195_18	UniRef90	UniRef90_UPI000E54ACF0	helix-turn-helix domain-containing protein	NA
UHGV-0362195_18	eggNOG-mapper	411483.FAEPRAA2165_00756	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0362195_18	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0362195_18	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0362195_18	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0362195_18	Structural annotation	PF00717, PF12844, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-0362195_20	KOfam	K14059	int; integrase	NA
UHGV-0362195_20	PHROG	phrog_1	integrase	integration and excision
UHGV-0362195_20	UniRef90	UniRef90_UPI000E46F6FE	site-specific integrase	NA
UHGV-0362195_20	eggNOG-mapper	1232446.BAIE02000002_gene793	Phage integrase family	NA
UHGV-0362195_20	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0362195_20	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0362195_20	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0362195_20	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-0362195_21	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0362195_21	PHROG	phrog_435	endolysin	lysis
UHGV-0362195_21	UniRef90	UniRef90_UPI001D075068	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0362195_21	eggNOG-mapper	33035.JPJF01000090_gene96	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0362195_21	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0362195_21	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0362195_21	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0362195_21	Structural annotation	PF01520, PF01471, MF_00562, TIGR02883, NF038080, COG0860, COG3409	NA	NA
UHGV-0362195_23	PHROG	phrog_33625	holin	lysis
UHGV-0362195_23	UniRef90	UniRef90_A0A6N3AF02	Bacteriophage holin	NA
UHGV-0362195_23	eggNOG-mapper	1196031.ALEG01000039_gene1391	Bacteriophage holin	NA
UHGV-0362195_23	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0362195_23	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0362195_23	COG	COG5546	NA	NA
UHGV-0362195_23	Structural annotation	COG5546	NA	NA
UHGV-0362195_24	PHROG	phrog_24267	NA	unknown function
UHGV-0362195_24	eggNOG-mapper	553973.CLOHYLEM_06931	tail collar domain protein	NA
UHGV-0362195_24	COG	COG4675	Phage tail collar domain	NA
UHGV-0362195_24	Structural annotation	PF10651	NA	NA
UHGV-0362195_25	PHROG	phrog_3558	tail protein	tail
UHGV-0362195_25	UniRef90	UniRef90_A0A6N3AEF7	Peptidase S74 domain-containing protein	NA
UHGV-0362195_25	eggNOG-mapper	610130.Closa_0754	NA	NA
UHGV-0362195_25	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0362195_25	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0362195_25	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0362195_25	COG	COG4926	Phage-related protein	NA
UHGV-0362195_25	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0362195_26	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0362195_26	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-0362195_26	COG	COG4722	Phage-related protein YomH	NA
UHGV-0362195_26	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-0362195_27	KOfam	K10398	KIF11, EG5; kinesin family member 11	NA
UHGV-0362195_27	PHROG	phrog_5218	NA	unknown function
UHGV-0362195_27	UniRef90	UniRef90_A0A6N3ADB1	Phage-related minor tail protein	NA
UHGV-0362195_27	eggNOG-mapper	658655.HMPREF0988_00531	Phage-related minor tail protein	NA
UHGV-0362195_27	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0362195_27	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0362195_27	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0362195_28	PHROG	phrog_706	NA	unknown function
UHGV-0362195_28	UniRef90	UniRef90_A0A6N3ADJ1	Bacteriophage Gp15 protein	NA
UHGV-0362195_28	eggNOG-mapper	428125.CLOLEP_01787	Bacteriophage Gp15 protein	NA
UHGV-0362195_28	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0362195_28	Structural annotation	PF06854	NA	NA
UHGV-0362195_29	Structural annotation	PF10666	NA	NA
UHGV-0362195_30	PHROG	phrog_820	major tail protein	tail
UHGV-0362195_30	UniRef90	UniRef90_A0A3A6EPU8	S-l_SbsC_C domain-containing protein	NA
UHGV-0362195_30	eggNOG-mapper	428125.CLOLEP_00178	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0362195_30	COG	COG5492	NA	NA
UHGV-0362195_30	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0362195_31	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0362195_31	Structural annotation	PF12691	NA	NA
UHGV-0362195_32	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0362195_32	UniRef90	UniRef90_A0A6N3ACU8	Minor capsid protein	NA
UHGV-0362195_32	eggNOG-mapper	1027396.LMOSA_9610	Minor capsid protein	NA
UHGV-0362195_32	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0362195_32	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0362195_33	UniRef90	UniRef90_UPI001D06E7F2	minor capsid protein	NA
UHGV-0362195_33	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0362195_34	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0362195_34	eggNOG-mapper	1497679.EP56_07555	NA	NA
UHGV-0362195_35	PHROG	phrog_422	major head protein	head and packaging
UHGV-0362195_35	UniRef90	UniRef90_A0A316T938	S-l_SbsC_C domain-containing protein	NA
UHGV-0362195_35	eggNOG-mapper	428125.CLOLEP_00183	COG NOG28280 non supervised orthologous group	NA
UHGV-0362195_35	Structural annotation	PF19821, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0362195_37	eggNOG-mapper	596323.HMPREF0554_1580	Belongs to the Dps family	NA
UHGV-0362195_37	COG	COG0783	DNA-binding ferritin-like protein (oxidative damage protectant)	NA
UHGV-0362195_37	Structural annotation	PF14530, MF_01441, NF009990, COG0783	NA	NA
UHGV-0362195_39	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0362195_39	UniRef90	UniRef90_A0A6N3A974	Phage minor capsid protein 2	NA
UHGV-0362195_39	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0362195_39	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0362195_39	COG	COG2369	NA	NA
UHGV-0362195_39	Structural annotation	PF06152	NA	NA
UHGV-0362195_40	PHROG	phrog_533	portal protein	head and packaging
UHGV-0362195_40	UniRef90	UniRef90_A0A6N3AB16	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0362195_40	eggNOG-mapper	428125.CLOLEP_01803	NA	NA
UHGV-0362195_40	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0362195_40	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0362195_40	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0362195_41	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0362195_41	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0362195_41	UniRef90	UniRef90_A0A6N3ALZ5	Terminase-like family protein	NA
UHGV-0362195_41	eggNOG-mapper	642492.Clole_0814	Phage terminase, large subunit, PBSX family	NA
UHGV-0362195_41	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0362195_41	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0362195_41	COG	COG1783	Phage terminase large subunit	NA
UHGV-0362195_41	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0362195_42	UniRef90	UniRef90_A0A3E3EF98	Helix-turn-helix domain-containing protein	NA
UHGV-0362195_42	eggNOG-mapper	428125.CLOLEP_01805	NA	NA
UHGV-0362195_42	Structural annotation	PF13542	NA	NA
UHGV-0362195_46	UniRef90	UniRef90_A0A7U9CJ41	Phosphagen kinase N-terminal domain-containing protein	NA
UHGV-0362195_46	Structural annotation	COG5475	NA	NA
UHGV-0362195_47	eggNOG-mapper	1235799.C818_00262	NA	NA
UHGV-0362195_50	PHROG	phrog_10455	NA	unknown function
UHGV-0362195_50	UniRef90	UniRef90_R7N9Z9	Conserved domain protein	NA
UHGV-0362195_51	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0362195_51	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-0362195_51	UniRef90	UniRef90_G9R0Z5	N6_Mtase domain-containing protein	NA
UHGV-0362195_51	eggNOG-mapper	1095750.HMPREF9970_0172	site-specific DNA-methyltransferase (adenine-specific) activity	NA
UHGV-0362195_51	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-0362195_51	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0362195_51	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0362195_51	Structural annotation	PF02384, TIGR00497, COG0286	NA	NA
UHGV-0362195_52	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0362195_52	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-0362195_52	UniRef90	UniRef90_G9R0Z4	N6_Mtase domain-containing protein	NA
UHGV-0362195_52	eggNOG-mapper	1095750.HMPREF9970_0171	site-specific DNA-methyltransferase (adenine-specific) activity	NA
UHGV-0362195_52	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0362195_52	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0362195_52	Structural annotation	PF02475, MF_02217, NF000058, COG2263	NA	NA
UHGV-0362195_53	eggNOG-mapper	645991.Sgly_0337	NA	NA
UHGV-0362195_54	PHROG	phrog_4601	NA	unknown function
UHGV-0362195_55	PHROG	phrog_30930	NA	unknown function
UHGV-0362195_55	UniRef90	UniRef90_D2BQD3	NA	NA
UHGV-0362195_55	eggNOG-mapper	1214184.ALKY01000039_gene933	NA	NA
UHGV-0362195_56	PHROG	phrog_419	NA	unknown function
UHGV-0362195_56	UniRef90	UniRef90_UPI0011A81AA2	potassium-transporting ATPase subunit KdpA	NA
UHGV-0362195_56	eggNOG-mapper	279010.BL00889	NA	NA
UHGV-0362195_56	Structural annotation	PF14083	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0362195	Yes	34,727 bps	33.84%	100.00%	0.9783
UHGV-0108939	No	41,694 bps	32.76%	99.90%	0.9752
UHGV-0096166	No	37,095 bps	33.50%	99.90%	0.9757
UHGV-0333789	No	35,592 bps	33.72%	99.90%	0.9755
UHGV-0092702	No	34,085 bps	33.57%	97.78%	0.9766
UHGV-2110460	No	34,028 bps	33.87%	97.60%	0.9766
UHGV-0335606	No	33,440 bps	34.01%	95.90%	0.9770
UHGV-0307481	No	32,374 bps	34.15%	92.84%	0.9774
UHGV-1441475	No	29,175 bps	34.31%	83.66%	0.9807
UHGV-0288988	No	29,125 bps	34.33%	83.51%	0.9809
UHGV-0129329	No	28,016 bps	34.40%	80.32%	0.9798
UHGV-0044889	No	18,130 bps	35.63%	52.00%	0.9818
UHGV-1518990	No	17,921 bps	35.67%	51.40%	0.9819
UHGV-1604896	No	16,717 bps	35.40%	47.93%	0.9813
UHGV-1707126	No	14,500 bps	32.59%	41.64%	0.9704
UHGV-0125433	No	14,139 bps	32.62%	40.60%	0.9683