vOTU-053002

Overview

vOTU representative UHGV-0451901

No. of genomes 11

Genome length 31,456 bps

Completeness 100.00% (complete)

Host Woodwardibium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-053002
Number of genomes	11
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-01675 › vGENUS-02094 › vSUBGEN-03767 › vOTU-053002
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › CAG-382 › Woodwardibium
Host range breadth	Genus
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0451901
BioSample	NA
Genome length	31,456 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	43
CDS density	89.83%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0451901_1	PHROG	phrog_4433	NA	unknown function
UHGV-0451901_1	eggNOG-mapper	665950.HMPREF1025_01373	regulation of DNA-templated transcription, elongation	NA
UHGV-0451901_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0451901_2	PHROG	phrog_111	DNA methyltransferase	other
UHGV-0451901_2	UniRef90	UniRef90_A0A1C6GCR8	Phage N-6-adenine-methyltransferase	NA
UHGV-0451901_2	eggNOG-mapper	445972.ANACOL_03344	DNA N-6-adenine-methyltransferase (Dam)	NA
UHGV-0451901_2	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-0451901_2	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0451901_3	PHROG	phrog_824	NA	unknown function
UHGV-0451901_3	UniRef90	UniRef90_UPI00189BCDD7	VRR-NUC domain-containing protein	NA
UHGV-0451901_3	eggNOG-mapper	767434.Fraau_0982	VRR-NUC domain	NA
UHGV-0451901_3	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0451901_4	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-0451901_4	UniRef90	UniRef90_A0A2Z4QA35	Putative radical SAM domain protein	NA
UHGV-0451901_4	eggNOG-mapper	397290.C810_00564	NA	NA
UHGV-0451901_4	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-0451901_4	Structural annotation	MF_01864, NF010916, COG2516	NA	NA
UHGV-0451901_9	PHROG	phrog_750	NA	unknown function
UHGV-0451901_9	eggNOG-mapper	742723.HMPREF9477_00931	NA	NA
UHGV-0451901_9	Structural annotation	PF13835, NF040858	NA	NA
UHGV-0451901_10	UniRef90	UniRef90_A0A1Y4THT0	HTH cro/C1-type domain-containing protein	NA
UHGV-0451901_10	eggNOG-mapper	445972.ANACOL_00136	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0451901_10	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0451901_10	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0451901_11	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0451901_11	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0451901_11	UniRef90	UniRef90_A0A7X5E3N4	Helix-turn-helix domain-containing protein	NA
UHGV-0451901_11	eggNOG-mapper	1507.HMPREF0262_00168	Peptidase S24-like	NA
UHGV-0451901_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0451901_11	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0451901_11	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0451901_11	Structural annotation	PF00717, PF01381, MF_00015, NF041951, NF007621, COG2932	NA	NA
UHGV-0451901_12	KOfam	K02342	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	NA
UHGV-0451901_12	PHROG	phrog_192	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UHGV-0451901_12	UniRef90	UniRef90_A0A1Y4S764	BRCT domain-containing protein	NA
UHGV-0451901_12	eggNOG-mapper	264732.Moth_1154	HELICc2	NA
UHGV-0451901_12	PADLOC	cd06127	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
UHGV-0451901_12	Pfam	PF00929	Exonuclease	RNase_T
UHGV-0451901_12	Pfam	PF00533	BRCA1 C Terminus (BRCT) domain	BRCT
UHGV-0451901_12	NCBIFam	TIGR00573.1	exonuclease, DNA polymerase III, epsilon subunit family	NA
UHGV-0451901_12	COG	COG1199	Rad3-related DNA helicase DinG	NA
UHGV-0451901_13	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0451901_13	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-0451901_13	UniRef90	UniRef90_UPI000C08A710	type II toxin-antitoxin system HicB family antitoxin	NA
UHGV-0451901_13	eggNOG-mapper	138119.DSY3841	PFAM Uncharacterised protein family UPF0150	NA
UHGV-0451901_13	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-0451901_13	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0451901_13	Structural annotation	PF15919, COG1598	NA	NA
UHGV-0451901_14	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-0451901_14	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0451901_14	UniRef90	UniRef90_UPI000C07CF86	type II toxin-antitoxin system HicA family toxin	NA
UHGV-0451901_14	eggNOG-mapper	768710.DesyoDRAFT_1274	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-0451901_14	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-0451901_14	COG	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	NA
UHGV-0451901_14	Structural annotation	PF07927, COG1724	NA	NA
UHGV-0451901_15	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0451901_15	PHROG	phrog_95	integrase	integration and excision
UHGV-0451901_15	UniRef90	UniRef90_UPI00189960B8	recombinase family protein	NA
UHGV-0451901_15	eggNOG-mapper	1235835.C814_03413	Resolvase, N terminal domain	NA
UHGV-0451901_15	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0451901_15	Pfam	PF07508	Recombinase	Recombinase
UHGV-0451901_15	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0451901_15	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0451901_15	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0451901_16	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0451901_16	PHROG	phrog_435	endolysin	lysis
UHGV-0451901_16	UniRef90	UniRef90_W8T9Y1	SPOR domain-containing protein	NA
UHGV-0451901_16	eggNOG-mapper	1286171.EAL2_808p01900	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0451901_16	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0451901_16	Pfam	PF00395	S-layer homology domain	SLH
UHGV-0451901_16	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0451901_16	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0451901_17	PHROG	phrog_1129	holin	lysis
UHGV-0451901_17	UniRef90	UniRef90_A0A316LUD8	Enolase (Fragment)	NA
UHGV-0451901_17	eggNOG-mapper	411473.RUMCAL_01944	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0451901_17	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0451901_17	Structural annotation	PF06946	NA	NA
UHGV-0451901_18	PHROG	phrog_9428	NA	unknown function
UHGV-0451901_18	UniRef90	UniRef90_A0A316LVP0	Serine/threonine protein kinase	NA
UHGV-0451901_18	eggNOG-mapper	1226322.HMPREF1545_03573	NA	NA
UHGV-0451901_19	Pfam	PF01079	Hint module	Hint
UHGV-0451901_19	COG	COG3209	NA	NA
UHGV-0451901_20	PHROG	phrog_18725	NA	unknown function
UHGV-0451901_20	UniRef90	UniRef90_G9YSD2	Big_13 domain-containing protein	NA
UHGV-0451901_20	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0451901_20	Structural annotation	PF13754, COG2372	NA	NA
UHGV-0451901_21	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-0451901_21	PHROG	phrog_11157	NA	unknown function
UHGV-0451901_21	UniRef90	UniRef90_UPI001C10C6DC	Ig-like domain-containing protein	NA
UHGV-0451901_21	eggNOG-mapper	1286171.EAL2_c11220	amine dehydrogenase activity	NA
UHGV-0451901_21	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0451901_21	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0451901_21	COG	COG3391	DNA-binding beta-propeller fold protein YncE	NA
UHGV-0451901_21	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0451901_23	PHROG	phrog_13879	NA	unknown function
UHGV-0451901_23	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-0451901_23	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0451901_24	eggNOG-mapper	1235797.C816_02660	NA	NA
UHGV-0451901_24	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0451901_25	PHROG	phrog_58	tail length tape measure protein	tail
UHGV-0451901_25	UniRef90	UniRef90_A0A7X8V908	Phage tail protein	NA
UHGV-0451901_25	eggNOG-mapper	431943.CKL_2631	tape measure	NA
UHGV-0451901_25	COG	COG5185	Chromosome segregation protein NDC80, interacts with SMC proteins	NA
UHGV-0451901_25	Structural annotation	PF20155, COG5280	NA	NA
UHGV-0451901_26	Structural annotation	PF11836	NA	NA
UHGV-0451901_27	PHROG	phrog_88	major tail protein	tail
UHGV-0451901_27	UniRef90	UniRef90_UPI0018771F27	phage tail protein	NA
UHGV-0451901_27	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-0451901_27	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0451901_27	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0451901_28	UniRef90	UniRef90_A0A1C6FG30	Phage protein, HK97 gp10 family	NA
UHGV-0451901_28	eggNOG-mapper	1235798.C817_04589	NA	NA
UHGV-0451901_28	Structural annotation	TIGR01725	NA	NA
UHGV-0451901_29	eggNOG-mapper	999413.HMPREF1094_02005	NA	NA
UHGV-0451901_29	Structural annotation	PF05657	NA	NA
UHGV-0451901_30	PHROG	phrog_19734	NA	unknown function
UHGV-0451901_30	UniRef90	UniRef90_A0A6I7GNS7	Phage head closure protein	NA
UHGV-0451901_30	eggNOG-mapper	349161.Dred_2602	NA	NA
UHGV-0451901_30	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0451901_30	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0451901_31	PHROG	phrog_749	NA	unknown function
UHGV-0451901_31	eggNOG-mapper	349161.Dred_2603	NA	NA
UHGV-0451901_32	PHROG	phrog_10	major head protein	head and packaging
UHGV-0451901_32	UniRef90	UniRef90_UPI0018757887	phage major capsid protein	NA
UHGV-0451901_32	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-0451901_32	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0451901_32	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0451901_32	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0451901_32	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0451901_32	Structural annotation	PF05065, PF12733, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0451901_33	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0451901_33	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0451901_33	UniRef90	UniRef90_UPI00111E41DA	Clp protease ClpP	NA
UHGV-0451901_33	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-0451901_33	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0451901_33	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0451901_33	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0451901_34	PHROG	phrog_12	portal protein	head and packaging
UHGV-0451901_34	UniRef90	UniRef90_UPI0018755FA4	phage portal protein	NA
UHGV-0451901_34	eggNOG-mapper	610130.Closa_0742	Phage portal protein, HK97 family	NA
UHGV-0451901_34	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0451901_34	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0451901_34	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0451901_34	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0451901_35	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0451901_35	UniRef90	UniRef90_A0A1C6FFC9	Phage terminase-like protein, large subunit	NA
UHGV-0451901_35	eggNOG-mapper	1235792.C808_00083	Phage terminase-like protein large subunit	NA
UHGV-0451901_35	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0451901_35	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0451901_35	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0451901_36	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0451901_36	UniRef90	UniRef90_UPI001874172A	P27 family phage terminase small subunit	NA
UHGV-0451901_36	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0451901_36	COG	COG5484	NA	NA
UHGV-0451901_36	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0451901_37	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0451901_37	UniRef90	UniRef90_UPI00164ADA1B	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0451901_37	eggNOG-mapper	484770.UFO1_1680	NA	NA
UHGV-0451901_37	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-0451901_38	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0451901_38	eggNOG-mapper	537013.CLOSTMETH_02141	NA	NA
UHGV-0451901_38	Structural annotation	PF21578, MF_00360	NA	NA
UHGV-0451901_39	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0451901_39	PHROG	phrog_363	DNA methyltransferase	other
UHGV-0451901_39	UniRef90	UniRef90_UPI0018A8D167	DNA cytosine methyltransferase	NA
UHGV-0451901_39	eggNOG-mapper	903814.ELI_3130	C-5 cytosine-specific DNA methylase	NA
UHGV-0451901_39	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0451901_39	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0451901_39	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0451901_39	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0451901_41	UniRef90	UniRef90_UPI0006DCB293	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0451901_41	eggNOG-mapper	1232452.BAIB02000007_gene1640	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0451901_41	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0451901_42	KOfam	K19170	dndC; DNA sulfur modification protein DndC	NA
UHGV-0451901_42	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0451901_42	UniRef90	UniRef90_UPI000E4171E5	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0451901_42	eggNOG-mapper	1095750.HMPREF9970_1672	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0451901_42	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0451901_42	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0451901_43	eggNOG-mapper	645991.Sgly_0315	regulation of DNA-templated transcription, elongation	NA
UHGV-0451901_43	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0451901_43	Structural annotation	NF007410	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0451901	Yes	31,456 bps	53.18%	100.00%	0.9695
UHGV-0998249	No	32,730 bps	53.53%	99.90%	0.9673
UHGV-0083907	No	30,053 bps	54.23%	94.67%	0.9710
UHGV-0090193	No	20,087 bps	51.92%	63.28%	0.9305
UHGV-1442333	No	19,990 bps	56.17%	62.97%	0.9779
UHGV-0098188	No	18,927 bps	55.49%	59.62%	0.9772
UHGV-0057001	No	17,773 bps	53.81%	55.99%	0.9788
UHGV-0148498	No	17,526 bps	56.26%	55.21%	0.9807
UHGV-1534475	No	17,118 bps	55.36%	48.83%	0.9742
UHGV-0089365	No	12,725 bps	54.06%	35.07%	0.9815
UHGV-0056129	No	11,498 bps	53.45%	30.88%	0.9814