vOTU-054050

Overview

No. of genomes 4

Genome length 41,126 bps

Completeness 100.00% (complete)

Host CAG-170 sp900548625

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-054050
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00060 › vGENUS-01007 › vSUBGEN-04167 › vOTU-054050
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170 › CAG-170 sp900548625
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1342169
BioSample	SAMN00715149
Genome length	41,126 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	57
CDS density	94.68%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1342169_1	Pfam	PF00560	Leucine Rich Repeat	LRR_1
UHGV-1342169_1	Pfam	PF12799	Leucine Rich repeats (2 copies)	LRR_4
UHGV-1342169_2	Structural annotation	PF21291, TIGR03070, COG3655	NA	NA
UHGV-1342169_7	PHROG	phrog_1090	NA	unknown function
UHGV-1342169_7	UniRef90	UniRef90_A0A1S1YCV1	CRISPR-associated protein Cas2	NA
UHGV-1342169_7	eggNOG-mapper	1163617.SCD_n00252	NA	NA
UHGV-1342169_9	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1342169_9	UniRef90	UniRef90_A0A1Y4L0A2	HTH cro/C1-type domain-containing protein	NA
UHGV-1342169_9	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-1342169_9	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1342169_9	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1342169_9	Structural annotation	PF01381, MF_00535, NF007257, COG1396	NA	NA
UHGV-1342169_12	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1342169_12	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-1342169_13	KOfam	K14059	int; integrase	NA
UHGV-1342169_13	PHROG	phrog_1	integrase	integration and excision
UHGV-1342169_13	UniRef90	UniRef90_A0A2Z4QB94	Tyr recombinase domain-containing protein	NA
UHGV-1342169_13	eggNOG-mapper	1410630.JNKP01000001_gene1832	Phage integrase family	NA
UHGV-1342169_13	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1342169_13	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1342169_13	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-1342169_14	UniRef90	UniRef90_A0A7M1RS47	RNA polymerase sigma factor/ubiquitin-like protein	NA
UHGV-1342169_14	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-1342169_17	UniRef90	UniRef90_A0A843IZ65	Sigma70_r4 domain-containing protein	NA
UHGV-1342169_17	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-1342169_17	Structural annotation	PF04545, MF_00245, TIGR02985, COG2739	NA	NA
UHGV-1342169_18	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1342169_18	PHROG	phrog_1794	amidase	lysis
UHGV-1342169_18	UniRef90	UniRef90_A0A3D4VSU2	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1342169_18	eggNOG-mapper	411470.RUMGNA_02087	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-1342169_18	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1342169_18	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1342169_18	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1342169_19	PHROG	phrog_13256	NA	unknown function
UHGV-1342169_19	eggNOG-mapper	1226322.HMPREF1545_00166	NA	NA
UHGV-1342169_21	PHROG	phrog_937	hemolysin	other
UHGV-1342169_21	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-1342169_22	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-1342169_22	PHROG	phrog_7158	NA	unknown function
UHGV-1342169_22	UniRef90	UniRef90_A0A1E8F0N5	3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA	NA
UHGV-1342169_22	Structural annotation	PF02368, PF09423, MF_00575, NF003743, NF005261, COG5492	NA	NA
UHGV-1342169_23	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1342169_25	KOfam	K16617	COL13A; collagen type XIII alpha	NA
UHGV-1342169_25	PHROG	phrog_819	tail protein	tail
UHGV-1342169_25	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1342169_25	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-1342169_26	Structural annotation	PF01835, NF005176, COG5456	NA	NA
UHGV-1342169_27	eggNOG-mapper	1408437.JNJN01000039_gene389	heme binding	NA
UHGV-1342169_27	Pfam	PF18819	Phage MuF-C-terminal domain	MuF_C
UHGV-1342169_27	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-1342169_28	UniRef90	UniRef90_R5DCX9	PG_binding_1 domain-containing protein	NA
UHGV-1342169_28	eggNOG-mapper	1410650.JHWL01000003_gene2815	NA	NA
UHGV-1342169_30	eggNOG-mapper	537007.BLAHAN_05255	NA	NA
UHGV-1342169_31	PHROG	phrog_12105	NA	unknown function
UHGV-1342169_31	eggNOG-mapper	1226322.HMPREF1545_03850	NA	NA
UHGV-1342169_32	PHROG	phrog_15239	NA	unknown function
UHGV-1342169_33	PHROG	phrog_1357	major head protein	head and packaging
UHGV-1342169_33	UniRef90	UniRef90_A0A2V2CFL5	N4-gp56 family major capsid protein	NA
UHGV-1342169_33	eggNOG-mapper	748224.HMPREF9436_02545	NA	NA
UHGV-1342169_33	Pfam	PF13252	NA	DUF4043
UHGV-1342169_33	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-1342169_33	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1342169_34	PHROG	phrog_13908	NA	unknown function
UHGV-1342169_34	eggNOG-mapper	1410650.JHWL01000003_gene2831	NA	NA
UHGV-1342169_35	PHROG	phrog_156	portal protein	head and packaging
UHGV-1342169_35	eggNOG-mapper	1410650.JHWL01000003_gene2833	NA	NA
UHGV-1342169_35	Structural annotation	PF16510, MF_04120, TIGR01538, COG4383	NA	NA
UHGV-1342169_36	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-1342169_36	eggNOG-mapper	1410650.JHWL01000003_gene2827	NA	NA
UHGV-1342169_36	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-1342169_37	PHROG	phrog_28563	NA	unknown function
UHGV-1342169_37	UniRef90	UniRef90_A0A7G9GB56	INTEIN_C_TER domain-containing protein	NA
UHGV-1342169_37	NCBIFam	TIGR01443.1	intein C-terminal splicing region	NA
UHGV-1342169_38	PHROG	phrog_15471	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1342169_38	UniRef90	UniRef90_A0A396QEH1	HNH endonuclease	NA
UHGV-1342169_38	eggNOG-mapper	1235800.C819_00490	HNH endonuclease	NA
UHGV-1342169_38	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1342169_39	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1342169_39	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-1342169_39	UniRef90	UniRef90_A0A396QXH8	Terminase-like family protein	NA
UHGV-1342169_39	eggNOG-mapper	1410650.JHWL01000003_gene2834	NA	NA
UHGV-1342169_39	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1342169_39	NCBIFam	TIGR01445.1	intein N-terminal splicing region	NA
UHGV-1342169_39	COG	COG1783	Phage terminase large subunit	NA
UHGV-1342169_39	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1342169_41	UniRef90	UniRef90_A0A3D2I6C5	Conjugal transfer protein	NA
UHGV-1342169_41	eggNOG-mapper	272563.CD630_05081	Cysteine-rich KTR	NA
UHGV-1342169_41	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-1342169_41	Structural annotation	PF14205	NA	NA
UHGV-1342169_42	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1342169_42	eggNOG-mapper	537013.CLOSTMETH_02141	NA	NA
UHGV-1342169_42	Structural annotation	PF21578, MF_00360	NA	NA
UHGV-1342169_44	Structural annotation	PF20111, NF033202	NA	NA
UHGV-1342169_46	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1342169_46	UniRef90	UniRef90_UPI0006C2AC63	NA	NA
UHGV-1342169_46	eggNOG-mapper	693746.OBV_25250	NA	NA
UHGV-1342169_46	Pfam	PF06356	NA	DUF1064
UHGV-1342169_46	Structural annotation	PF06356	NA	NA
UHGV-1342169_47	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-1342169_48	PHROG	phrog_4019	NA	unknown function
UHGV-1342169_49	PHROG	phrog_3136	NA	unknown function
UHGV-1342169_49	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-1342169_49	eggNOG-mapper	693746.OBV_25380	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-1342169_49	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-1342169_49	Structural annotation	PF04266, MF_00684, NF008917, COG4933	NA	NA
UHGV-1342169_50	PHROG	phrog_15609	NA	unknown function
UHGV-1342169_50	UniRef90	UniRef90_A0A7G9WGA3	NA	NA
UHGV-1342169_50	eggNOG-mapper	1501230.ET33_21155	NA	NA
UHGV-1342169_50	Pfam	PF11300	NA	DUF3102
UHGV-1342169_50	COG	COG0188	DNA gyrase/topoisomerase IV, subunit A	NA
UHGV-1342169_51	PHROG	phrog_111	DNA methyltransferase	other
UHGV-1342169_51	UniRef90	UniRef90_UPI001C10E283	phage N-6-adenine-methyltransferase	NA
UHGV-1342169_51	eggNOG-mapper	760568.Desku_0784	DNA N-6-adenine-methyltransferase	NA
UHGV-1342169_51	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-1342169_51	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-1342169_51	Structural annotation	PF05869, MF_03187, TIGR01712, COG2263	NA	NA
UHGV-1342169_55	Structural annotation	PF05082	NA	NA
UHGV-1342169_57	UniRef90	UniRef90_A0A2Z4GU98	Ribonuclease inhibitor	NA
UHGV-1342169_57	eggNOG-mapper	563031.HMPREF0666_01114	NA	NA
UHGV-1342169_57	Pfam	PF00560	Leucine Rich Repeat	LRR_1

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1342169	Yes	41,126 bps	59.36%	100.00%	0.9815
UHGV-0126393	No	40,946 bps	59.33%	100.00%	0.9814
UHGV-1459592	No	41,355 bps	59.37%	99.83%	0.9815
UHGV-1472848	No	40,822 bps	59.33%	98.54%	0.9814