vOTU-054309

Overview

vOTU representative UHGV-1351942

No. of genomes 4

Genome length 41,577 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-054309
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-00034 › vSUBGEN-19228 › vOTU-054309
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1351942
BioSample	SAMEA2338824
Genome length	41,577 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	78
CDS density	89.73%
tRNA count	4
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1351942_1	COG	COG1670	Protein N-acetyltransferase, RimJ/RimL family	NA
UHGV-1351942_1	Structural annotation	PF11039, MF_02210, NF000360, COG3981	NA	NA
UHGV-1351942_2	Structural annotation	PF07374, MF_00245, NF001072, COG2739	NA	NA
UHGV-1351942_5	Structural annotation	PF07870, MF_01506	NA	NA
UHGV-1351942_6	PHROG	phrog_15303	NA	unknown function
UHGV-1351942_6	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-1351942_8	KOfam	K07273	acm; lysozyme	NA
UHGV-1351942_8	PHROG	phrog_291	endolysin	lysis
UHGV-1351942_8	UniRef90	UniRef90_E2ZES5	Glycosyl hydrolase family 25	NA
UHGV-1351942_8	eggNOG-mapper	748224.HMPREF9436_00154	hydrolase, family 25	NA
UHGV-1351942_8	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1351942_8	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-1351942_8	Structural annotation	PF01183, COG3757	NA	NA
UHGV-1351942_9	PHROG	phrog_1382	NA	unknown function
UHGV-1351942_9	eggNOG-mapper	411468.CLOSCI_00272	NA	NA
UHGV-1351942_11	PHROG	phrog_9534	head protein	head and packaging
UHGV-1351942_11	eggNOG-mapper	748224.HMPREF9436_00405	domain, Protein	NA
UHGV-1351942_11	COG	COG5492	NA	NA
UHGV-1351942_11	Structural annotation	MF_04106	NA	NA
UHGV-1351942_12	PHROG	phrog_3558	tail protein	tail
UHGV-1351942_12	UniRef90	UniRef90_F9P917	Phage minor structural protein, N-terminal domain protein	NA
UHGV-1351942_12	eggNOG-mapper	1035184.HMPREF1042_1326	Prophage endopeptidase tail	NA
UHGV-1351942_12	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1351942_12	COG	COG4926	Phage-related protein	NA
UHGV-1351942_12	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-1351942_13	UniRef90	UniRef90_A0A417QGC1	MtfA protein	NA
UHGV-1351942_13	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-1351942_13	COG	COG4722	Phage-related protein YomH	NA
UHGV-1351942_13	Structural annotation	PF05709, PF02408, TIGR01633, COG4722	NA	NA
UHGV-1351942_14	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-1351942_14	UniRef90	UniRef90_A0A6N7TLD3	Tape measure protein	NA
UHGV-1351942_14	eggNOG-mapper	883066.HMPREF9233_00612	tape measure	NA
UHGV-1351942_14	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1351942_14	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-1351942_14	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1351942_14	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1351942_17	PHROG	phrog_885	major tail protein	tail
UHGV-1351942_17	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-1351942_17	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1351942_18	Structural annotation	PF13554	NA	NA
UHGV-1351942_19	PHROG	phrog_17977	NA	unknown function
UHGV-1351942_19	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-1351942_19	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1351942_21	PHROG	phrog_544	major head protein	head and packaging
UHGV-1351942_21	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-1351942_21	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-1351942_21	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1351942_22	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-1351942_24	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1351942_24	UniRef90	UniRef90_A0A844DDB3	HK97 gp10 family phage protein	NA
UHGV-1351942_24	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1351942_24	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1351942_24	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1351942_27	PHROG	phrog_8680	NA	unknown function
UHGV-1351942_27	UniRef90	UniRef90_A0A844D688	NA	NA
UHGV-1351942_27	eggNOG-mapper	1423790.BN53_04265	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-1351942_27	Pfam	PF14386	NA	DUF4417
UHGV-1351942_27	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1351942_27	Structural annotation	PF14386	NA	NA
UHGV-1351942_28	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-1351942_28	UniRef90	UniRef90_A0A6N7TLR7	Phage_Mu_F domain-containing protein	NA
UHGV-1351942_28	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-1351942_28	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1351942_28	COG	COG2369	NA	NA
UHGV-1351942_28	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1351942_30	PHROG	phrog_64	portal protein	head and packaging
UHGV-1351942_30	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-1351942_30	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1351942_30	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1351942_30	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1351942_31	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1351942_31	PHROG	phrog_10250	NA	unknown function
UHGV-1351942_31	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-1351942_31	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-1351942_31	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1351942_31	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1351942_31	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1351942_31	COG	COG1783	Phage terminase large subunit	NA
UHGV-1351942_31	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1351942_32	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-1351942_32	UniRef90	UniRef90_UPI001C02EFD1	DNA-packaging protein	NA
UHGV-1351942_32	eggNOG-mapper	397290.C810_05185	DNA-packaging protein gp3	NA
UHGV-1351942_32	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-1351942_32	Structural annotation	PF16677	NA	NA
UHGV-1351942_33	UniRef90	UniRef90_A0A6N7TNN9	NA	NA
UHGV-1351942_33	Structural annotation	PF07374	NA	NA
UHGV-1351942_35	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1351942_35	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1351942_35	UniRef90	UniRef90_A0A6N7TND6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1351942_35	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-1351942_35	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-1351942_35	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1351942_35	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-1351942_36	PHROG	phrog_7711	NA	unknown function
UHGV-1351942_36	eggNOG-mapper	1304866.K413DRAFT_1204	NA	NA
UHGV-1351942_38	PHROG	phrog_757	DNA methyltransferase	other
UHGV-1351942_38	UniRef90	UniRef90_A0A7J2R6L5	DNA cytosine methyltransferase (Fragment)	NA
UHGV-1351942_38	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-1351942_38	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1351942_40	UniRef90	UniRef90_UPI001C009709	NA	NA
UHGV-1351942_41	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1351942_41	UniRef90	UniRef90_E2ZNS5	Siphovirus Gp157	NA
UHGV-1351942_41	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-1351942_41	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1351942_41	Structural annotation	PF05565	NA	NA
UHGV-1351942_42	PHROG	phrog_15768	NA	unknown function
UHGV-1351942_42	UniRef90	UniRef90_A0A6N7TND1	NA	NA
UHGV-1351942_42	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-1351942_42	Pfam	PF19808	NA	DUF6291
UHGV-1351942_42	Structural annotation	PF19808	NA	NA
UHGV-1351942_44	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1351942_44	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1351942_44	UniRef90	UniRef90_A0A6N7TNV3	Single-stranded DNA-binding protein	NA
UHGV-1351942_44	eggNOG-mapper	748224.HMPREF9436_03359	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1351942_44	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1351942_44	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1351942_44	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1351942_44	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1351942_44	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-1351942_45	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1351942_45	UniRef90	UniRef90_E2ZNS9	Erf family protein	NA
UHGV-1351942_45	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-1351942_45	Pfam	PF04404	ERF superfamily	ERF
UHGV-1351942_45	Structural annotation	PF04404, COG4712	NA	NA
UHGV-1351942_46	PHROG	phrog_38771	NA	unknown function
UHGV-1351942_50	Structural annotation	PF12270, NF040944	NA	NA
UHGV-1351942_51	Structural annotation	PF10743, NF033787	NA	NA
UHGV-1351942_52	PHROG	phrog_4433	NA	unknown function
UHGV-1351942_52	eggNOG-mapper	106648.BBLJ01000054_gene3814	regulation of DNA-templated transcription, elongation	NA
UHGV-1351942_52	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1351942_52	Structural annotation	PF12120, NF007410	NA	NA
UHGV-1351942_53	eggNOG-mapper	1121865.OMW_01950	NA	NA
UHGV-1351942_53	Structural annotation	PF17516, NF007197	NA	NA
UHGV-1351942_55	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-1351942_55	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-1351942_57	Structural annotation	PF16857, NF001981	NA	NA
UHGV-1351942_58	PHROG	phrog_32852	NA	unknown function
UHGV-1351942_59	UniRef90	UniRef90_UPI001C2618C7	helix-turn-helix domain-containing protein	NA
UHGV-1351942_59	eggNOG-mapper	411483.FAEPRAA2165_00452	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1351942_59	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1351942_61	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1351942_61	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1351942_61	UniRef90	UniRef90_A0A844DFR0	Helix-turn-helix domain-containing protein	NA
UHGV-1351942_61	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-1351942_61	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1351942_61	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1351942_61	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1351942_64	PHROG	phrog_888	NA	unknown function
UHGV-1351942_64	UniRef90	UniRef90_A0A6N7TMA2	SHOCT domain-containing protein	NA
UHGV-1351942_64	eggNOG-mapper	1415774.U728_165	Short C-terminal domain	NA
UHGV-1351942_64	Pfam	PF14471	NA	DUF4428
UHGV-1351942_64	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-1351942_64	Structural annotation	PF15947, PF14471	NA	NA
UHGV-1351942_67	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-1351942_67	eggNOG-mapper	266265.Bxe_A3948	Helix-turn-helix domain	NA
UHGV-1351942_67	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1351942_67	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1351942_67	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-1351942_68	KOfam	K14059	int; integrase	NA
UHGV-1351942_68	PHROG	phrog_1	integrase	integration and excision
UHGV-1351942_68	UniRef90	UniRef90_A0A6N7TNQ4	Tyrosine-type recombinase/integrase	NA
UHGV-1351942_68	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-1351942_68	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1351942_68	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1351942_68	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-1351942_70	Structural annotation	PF12510	NA	NA
UHGV-1351942_71	PHROG	phrog_20016	NA	unknown function
UHGV-1351942_71	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1351942_71	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-1351942_71	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1351942_73	PHROG	phrog_16490	NA	unknown function
UHGV-1351942_73	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-1351942_74	PHROG	phrog_22984	NA	unknown function
UHGV-1351942_75	PHROG	phrog_21718	NA	unknown function
UHGV-1351942_75	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-1351942_76	PHROG	phrog_3754	NA	unknown function
UHGV-1351942_76	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-1351942_78	eggNOG-mapper	1235802.C823_04625	NA	NA
UHGV-1351942_78	Structural annotation	PF13560, NF040522	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1351942	Yes	41,577 bps	53.81%	100.00%	0.9817
UHGV-1385477	No	42,085 bps	53.73%	99.81%	0.9806
UHGV-0065154	No	33,085 bps	54.16%	78.47%	0.9809
UHGV-1428610	No	33,085 bps	54.16%	78.47%	0.9809