vOTU-056046

Overview

No. of genomes 6

Genome length 40,693 bps

Completeness 100.00% (complete)

Host Corynebacterium matruchotii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-056046
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00119 › vSUBFAM-01279 › vGENUS-01245 › vSUBGEN-01375 › vOTU-056046
Host taxonomy	Bacteria › Actinobacteriota › Actinomycetia › Mycobacteriales › Mycobacteriaceae › Corynebacterium › Corynebacterium matruchotii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1367234
BioSample	SAMEA2738020
Genome length	40,693 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	50
CDS density	90.73%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1367234_2	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1367234_2	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-1367234_2	UniRef90	UniRef90_UPI0018D2CF6C	phage regulatory protein/antirepressor Ant	NA
UHGV-1367234_2	eggNOG-mapper	645127.ckrop_1634	SOS response	NA
UHGV-1367234_2	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-1367234_2	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1367234_2	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-1367234_2	Structural annotation	PF09669, PF03374, TIGR02681, COG3646, COG3645	NA	NA
UHGV-1367234_3	PHROG	phrog_1793	head scaffolding protein	head and packaging
UHGV-1367234_3	Pfam	PF14265	NA	DUF4355
UHGV-1367234_3	Structural annotation	PF14265	NA	NA
UHGV-1367234_4	PHROG	phrog_673	head scaffolding protein	head and packaging
UHGV-1367234_4	UniRef90	UniRef90_A0A7U0D8M6	NA	NA
UHGV-1367234_4	eggNOG-mapper	1223542.GM1_030_00610	NA	NA
UHGV-1367234_4	Pfam	PF09956	NA	DUF2190
UHGV-1367234_4	Structural annotation	PF09956, COG5471	NA	NA
UHGV-1367234_5	PHROG	phrog_1650	major head protein	head and packaging
UHGV-1367234_5	UniRef90	UniRef90_A0A385UD91	Major capsid protein	NA
UHGV-1367234_5	eggNOG-mapper	1224164.B843_01015	NA	NA
UHGV-1367234_5	Structural annotation	PF05065, MF_04133, TIGR01554, COG4653	NA	NA
UHGV-1367234_6	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-1367234_6	UniRef90	UniRef90_A0A6B8VNV6	Phage protein Gp19/Gp15/Gp42	NA
UHGV-1367234_6	eggNOG-mapper	1206741.BAFX01000186_gene6746	NA	NA
UHGV-1367234_7	PHROG	phrog_123	tail terminator	connector
UHGV-1367234_8	PHROG	phrog_476	major tail protein	tail
UHGV-1367234_8	UniRef90	UniRef90_A0A2Z4Q8R5	Major tail protein	NA
UHGV-1367234_8	eggNOG-mapper	28358.Q9MBJ3_9CAUD	NA	NA
UHGV-1367234_10	PHROG	phrog_2624	tail assembly chaperone	tail
UHGV-1367234_10	eggNOG-mapper	1109713.G9FH42_9CAUD	NA	NA
UHGV-1367234_11	PHROG	phrog_6090	tail length tape measure protein	tail
UHGV-1367234_11	UniRef90	UniRef90_C0E266	SLT domain-containing protein	NA
UHGV-1367234_11	eggNOG-mapper	1224164.B843_01055	Tail protein	NA
UHGV-1367234_11	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-1367234_12	PHROG	phrog_106	minor tail protein	tail
UHGV-1367234_12	UniRef90	UniRef90_A0A496MYZ1	Phage tail protein	NA
UHGV-1367234_12	eggNOG-mapper	1224164.B843_01060	NA	NA
UHGV-1367234_13	PHROG	phrog_110	minor tail protein	tail
UHGV-1367234_13	UniRef90	UniRef90_A0A496MXV2	Phage tail protein	NA
UHGV-1367234_13	eggNOG-mapper	1224164.B843_01065	NA	NA
UHGV-1367234_13	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-1367234_14	PHROG	phrog_352	minor tail protein	tail
UHGV-1367234_14	UniRef90	UniRef90_A0A496MXX7	NA	NA
UHGV-1367234_14	eggNOG-mapper	1224164.B843_01070	NA	NA
UHGV-1367234_14	Pfam	PF10910	NA	DUF2744
UHGV-1367234_15	PHROG	phrog_12076	NA	unknown function
UHGV-1367234_15	eggNOG-mapper	558173.CDOO_02000	NA	NA
UHGV-1367234_16	PHROG	phrog_32265	NA	unknown function
UHGV-1367234_16	eggNOG-mapper	234621.RER_22480	tail collar domain protein	NA
UHGV-1367234_16	COG	COG4675	Phage tail collar domain	NA
UHGV-1367234_17	PHROG	phrog_13480	endolysin	lysis
UHGV-1367234_17	UniRef90	UniRef90_C0E274	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1367234_17	eggNOG-mapper	553207.HMPREF0299_7074	NA	NA
UHGV-1367234_17	Pfam	PF08924	Rv2525c-like, glycoside hydrolase-like domain	Rv2525c_GlyHyd-like
UHGV-1367234_17	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1367234_17	Structural annotation	PF08924, PF01510, MF_04111, MF_00606, NF008758, TIGR01361, COG3023, COG2876	NA	NA
UHGV-1367234_18	PHROG	phrog_443	holin	lysis
UHGV-1367234_18	UniRef90	UniRef90_A0A496MST8	Holin	NA
UHGV-1367234_18	eggNOG-mapper	1203190.CAJP01000005_gene1682	Putative lactococcus lactis phage r1t holin	NA
UHGV-1367234_18	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-1367234_18	Structural annotation	PF16945	NA	NA
UHGV-1367234_21	KOfam	K14059	int; integrase	NA
UHGV-1367234_21	PHROG	phrog_1	integrase	integration and excision
UHGV-1367234_21	UniRef90	UniRef90_UPI000368E69A	tyrosine-type recombinase/integrase	NA
UHGV-1367234_21	eggNOG-mapper	1121370.AQUY01000002_gene1618	Belongs to the 'phage' integrase family	NA
UHGV-1367234_21	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1367234_21	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1367234_21	Structural annotation	PF00589, MF_02055, NF040815, COG4974	NA	NA
UHGV-1367234_22	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-1367234_22	PHROG	phrog_56	DNA methyltransferase	other
UHGV-1367234_22	UniRef90	UniRef90_A0A6G8G148	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-1367234_22	eggNOG-mapper	1184607.AUCHE_04_00380	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-1367234_22	PADLOC	MTase_II_00144	Type II methyltransferase	RM
UHGV-1367234_22	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-1367234_22	COG	COG0338	DNA-adenine methylase	NA
UHGV-1367234_22	Structural annotation	PF02086, MF_01872, TIGR00571, COG0338	NA	NA
UHGV-1367234_23	PHROG	phrog_9592	NA	unknown function
UHGV-1367234_23	UniRef90	UniRef90_A0A3C0ZPA3	ParB domain-containing protein (Fragment)	NA
UHGV-1367234_23	eggNOG-mapper	195103.CPF_1605	DNA binding	NA
UHGV-1367234_23	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1367234_23	Structural annotation	MF_02015, TIGR04285, COG1475	NA	NA
UHGV-1367234_24	PHROG	phrog_87	metallo-protease	other
UHGV-1367234_24	UniRef90	UniRef90_C0E229	Peptidase_M78 domain-containing protein	NA
UHGV-1367234_24	eggNOG-mapper	645127.ckrop_1223	IrrE N-terminal-like domain	NA
UHGV-1367234_24	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1367234_24	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-1367234_24	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1367234_25	eggNOG-mapper	553207.HMPREF0299_6317	NA	NA
UHGV-1367234_27	PHROG	phrog_16278	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1367234_27	UniRef90	UniRef90_C0E231	HTH cro/C1-type domain-containing protein	NA
UHGV-1367234_27	eggNOG-mapper	196164.23492660	NA	NA
UHGV-1367234_27	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1367234_28	PHROG	phrog_16278	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1367234_28	UniRef90	UniRef90_S4XJP7	DNA-binding protein	NA
UHGV-1367234_28	eggNOG-mapper	558173.CDOO_01815	NA	NA
UHGV-1367234_29	PHROG	phrog_16278	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1367234_29	UniRef90	UniRef90_UPI001F2CF085	helix-turn-helix transcriptional regulator	NA
UHGV-1367234_29	eggNOG-mapper	1121934.AUDX01000016_gene2692	NA	NA
UHGV-1367234_30	UniRef90	UniRef90_A0A8F4IM65	Helix-turn-helix domain-containing protein	NA
UHGV-1367234_30	eggNOG-mapper	645127.ckrop_1635	NA	NA
UHGV-1367234_31	UniRef90	UniRef90_UPI0006413A1B	helix-turn-helix domain-containing protein	NA
UHGV-1367234_31	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1367234_31	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-1367234_36	PHROG	phrog_26560	NA	unknown function
UHGV-1367234_36	eggNOG-mapper	105420.BBPO01000002_gene7555	NA	NA
UHGV-1367234_39	UniRef90	UniRef90_A0A3S0AUY6	4Fe-4S Wbl-type domain-containing protein	NA
UHGV-1367234_39	eggNOG-mapper	1224164.B843_00945	NA	NA
UHGV-1367234_40	PHROG	phrog_26098	NA	unknown function
UHGV-1367234_40	eggNOG-mapper	698964.CDPW8_0156	HNH endonuclease	NA
UHGV-1367234_40	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1367234_42	PHROG	phrog_12885	NA	unknown function
UHGV-1367234_42	eggNOG-mapper	196164.23492675	NA	NA
UHGV-1367234_42	Structural annotation	NF033787	NA	NA
UHGV-1367234_43	PHROG	phrog_1454	NA	unknown function
UHGV-1367234_44	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1367234_44	PHROG	phrog_589	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1367234_44	UniRef90	UniRef90_C0E248	HNH endonuclease domain protein	NA
UHGV-1367234_44	eggNOG-mapper	351746.Pput_4118	HNH endonuclease	NA
UHGV-1367234_44	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1367234_44	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1367234_44	Structural annotation	PF01844, COG1403	NA	NA
UHGV-1367234_45	PHROG	phrog_8643	DNA polymerase/primase	DNA, RNA and nucleotide metabolism
UHGV-1367234_45	UniRef90	UniRef90_A0A0K2H1F7	DNA primase	NA
UHGV-1367234_45	eggNOG-mapper	1224164.B843_00975	Phage plasmid primase, P4 family domain protein	NA
UHGV-1367234_45	COG	COG4983	Primase-polymerase (Primpol) domain protein	NA
UHGV-1367234_45	Structural annotation	PF09250	NA	NA
UHGV-1367234_46	PHROG	phrog_226	minor tail protein	tail
UHGV-1367234_46	UniRef90	UniRef90_W5XXA9	Gp2	NA
UHGV-1367234_46	eggNOG-mapper	1224164.B843_00980	NA	NA
UHGV-1367234_47	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1367234_47	UniRef90	UniRef90_A0A496MT68	Terminase	NA
UHGV-1367234_47	eggNOG-mapper	1224164.B843_00985	Terminase	NA
UHGV-1367234_47	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1367234_47	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1367234_48	PHROG	phrog_104	portal protein	head and packaging
UHGV-1367234_48	UniRef90	UniRef90_A0A496MUR5	Phage portal protein	NA
UHGV-1367234_48	eggNOG-mapper	1224164.B843_00990	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1367234_48	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1367234_48	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1367234_49	PHROG	phrog_193	head maturation protease	head and packaging
UHGV-1367234_49	UniRef90	UniRef90_A0A0G3H0G1	CdiA_C domain-containing protein	NA
UHGV-1367234_49	eggNOG-mapper	1348662.CARG_02185	NA	NA
UHGV-1367234_49	Pfam	PF18451	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1367234	Yes	40,693 bps	54.02%	100.00%	0.9678
UHGV-1411018	No	45,255 bps	53.61%	99.90%	0.9605
UHGV-1471496	No	39,848 bps	54.47%	98.75%	0.9696
UHGV-1704561	No	18,767 bps	54.06%	46.42%	0.9763
UHGV-1689236	No	14,678 bps	53.88%	35.89%	0.9695
UHGV-1646004	No	14,464 bps	54.56%	35.79%	0.9710