vOTU-058461

Overview

vOTU representative UHGV-1520895

No. of genomes 2

Genome length 40,479 bps

Completeness 100.00% (complete)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-058461
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00005 › vGENUS-13176 › vSUBGEN-20912 › vOTU-058461
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1520895
BioSample	SAMEA3665198
Genome length	40,479 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	72
CDS density	92.66%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1520895_1	eggNOG-mapper	1232443.BAIA02000078_gene6	NA	NA
UHGV-1520895_2	PHROG	phrog_28802	NA	unknown function
UHGV-1520895_2	eggNOG-mapper	476272.RUMHYD_01772	NA	NA
UHGV-1520895_3	PHROG	phrog_20016	NA	unknown function
UHGV-1520895_3	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1520895_3	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-1520895_3	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1520895_4	PHROG	phrog_16490	NA	unknown function
UHGV-1520895_4	eggNOG-mapper	658655.HMPREF0988_00917	NA	NA
UHGV-1520895_5	PHROG	phrog_22984	NA	unknown function
UHGV-1520895_6	PHROG	phrog_21718	NA	unknown function
UHGV-1520895_6	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-1520895_7	PHROG	phrog_3754	NA	unknown function
UHGV-1520895_7	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-1520895_9	KOfam	K17733	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	NA
UHGV-1520895_9	PHROG	phrog_6523	endolysin	lysis
UHGV-1520895_9	UniRef90	UniRef90_A0A316L774	SLH domain-containing protein	NA
UHGV-1520895_9	eggNOG-mapper	1519439.JPJG01000023_gene536	D-alanyl-D-alanine carboxypeptidase	NA
UHGV-1520895_9	Pfam	PF13539	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
UHGV-1520895_9	COG	COG1876	LD-carboxypeptidase LdcB, LAS superfamily	NA
UHGV-1520895_9	Structural annotation	PF02557, MF_01924, NF000380, COG1876	NA	NA
UHGV-1520895_10	PHROG	phrog_13256	NA	unknown function
UHGV-1520895_10	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-1520895_12	PHROG	phrog_937	hemolysin	other
UHGV-1520895_12	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-1520895_13	PHROG	phrog_27545	NA	unknown function
UHGV-1520895_13	UniRef90	UniRef90_A0A2V2GQB6	Chitin-binding type-3 domain-containing protein	NA
UHGV-1520895_13	eggNOG-mapper	1519439.JPJG01000060_gene1895	NA	NA
UHGV-1520895_13	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-1520895_13	Structural annotation	PF16170	NA	NA
UHGV-1520895_14	eggNOG-mapper	1384065.JAGS01000001_gene2507	domain, Protein	NA
UHGV-1520895_14	NCBIFam	TIGR02167.1	bacterial surface protein 26-residue repeat	NA
UHGV-1520895_14	COG	COG1876	LD-carboxypeptidase LdcB, LAS superfamily	NA
UHGV-1520895_15	KOfam	K19721	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	NA
UHGV-1520895_15	PHROG	phrog_21962	tail protein	tail
UHGV-1520895_15	eggNOG-mapper	1519439.JPJG01000060_gene1892	Collagen triple helix repeat (20 copies)	NA
UHGV-1520895_15	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1520895_15	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-1520895_17	Structural annotation	PF20942, NF041894, COG5456	NA	NA
UHGV-1520895_18	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-1520895_18	Structural annotation	PF14594	NA	NA
UHGV-1520895_19	PHROG	phrog_6616	tail protein	tail
UHGV-1520895_19	UniRef90	UniRef90_A0A2Z4QA17	KID repeat-containing protein	NA
UHGV-1520895_19	eggNOG-mapper	1235797.C816_04180	NA	NA
UHGV-1520895_19	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-1520895_20	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-1520895_21	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1520895_21	UniRef90	UniRef90_A0A3D1JBH2	Phage tail protein (Fragment)	NA
UHGV-1520895_21	eggNOG-mapper	411470.RUMGNA_02076	Phage tail tape measure protein, TP901 family	NA
UHGV-1520895_21	COG	COG5283	Phage-related tail protein	NA
UHGV-1520895_21	Structural annotation	PF20155	NA	NA
UHGV-1520895_22	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-1520895_23	PHROG	phrog_885	major tail protein	tail
UHGV-1520895_23	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1520895_23	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-1520895_23	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1520895_24	PHROG	phrog_17405	head protein	head and packaging
UHGV-1520895_24	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-1520895_24	Structural annotation	PF11367	NA	NA
UHGV-1520895_25	PHROG	phrog_17977	NA	unknown function
UHGV-1520895_25	UniRef90	UniRef90_A0A285PT57	Phage head-tail joining protein	NA
UHGV-1520895_25	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1520895_27	PHROG	phrog_544	major head protein	head and packaging
UHGV-1520895_27	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-1520895_27	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-1520895_27	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1520895_28	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-1520895_28	Structural annotation	PF06810	NA	NA
UHGV-1520895_30	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1520895_30	UniRef90	UniRef90_A0A4D7AJK9	HK97 gp10 family phage protein	NA
UHGV-1520895_30	eggNOG-mapper	1280685.AUKC01000004_gene1630	NA	NA
UHGV-1520895_30	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1520895_30	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1520895_30	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1520895_32	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1520895_32	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-1520895_32	eggNOG-mapper	1111135.HMPREF1248_0663	cell adhesion	NA
UHGV-1520895_32	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1520895_32	COG	COG2369	NA	NA
UHGV-1520895_32	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-1520895_33	PHROG	phrog_64	portal protein	head and packaging
UHGV-1520895_33	UniRef90	UniRef90_UPI0018A8A301	phage portal protein	NA
UHGV-1520895_33	eggNOG-mapper	1235800.C819_02239	phage portal protein, SPP1	NA
UHGV-1520895_33	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1520895_33	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1520895_34	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1520895_34	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1520895_34	UniRef90	UniRef90_A0A4D7AZ70	PBSX family phage terminase large subunit	NA
UHGV-1520895_34	eggNOG-mapper	411461.DORFOR_01162	Phage terminase, large subunit, PBSX family	NA
UHGV-1520895_34	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1520895_34	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1520895_34	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1520895_34	COG	COG1783	Phage terminase large subunit	NA
UHGV-1520895_34	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1520895_36	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-1520895_36	PHROG	phrog_498	DNA methyltransferase	other
UHGV-1520895_36	UniRef90	UniRef90_A0A810Q3Z7	N6_N4_Mtase domain-containing protein	NA
UHGV-1520895_36	eggNOG-mapper	1423758.BN55_01455	DNA methylase	NA
UHGV-1520895_36	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1520895_36	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1520895_36	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1520895_36	COG	COG0863	DNA modification methylase	NA
UHGV-1520895_36	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-1520895_37	UniRef90	UniRef90_A0A285PYI3	Homeodomain-like domain	NA
UHGV-1520895_37	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-1520895_37	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-1520895_39	eggNOG-mapper	445972.ANACOL_00168	NA	NA
UHGV-1520895_43	PHROG	phrog_3136	NA	unknown function
UHGV-1520895_43	UniRef90	UniRef90_UPI001A9A8D4F	ASCH domain-containing protein	NA
UHGV-1520895_43	eggNOG-mapper	198628.Dda3937_01763	ASCH	NA
UHGV-1520895_43	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-1520895_43	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-1520895_44	PHROG	phrog_38832	NA	unknown function
UHGV-1520895_44	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-1520895_45	PHROG	phrog_27610	NA	unknown function
UHGV-1520895_46	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1520895_46	PHROG	phrog_116	DNA methyltransferase	other
UHGV-1520895_46	UniRef90	UniRef90_D4JYK0	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1520895_46	eggNOG-mapper	718252.FP2_16350	C-5 cytosine-specific DNA methylase	NA
UHGV-1520895_46	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-1520895_46	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1520895_46	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1520895_46	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1520895_47	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1520895_47	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1520895_47	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1520895_48	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-1520895_48	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1520895_48	UniRef90	UniRef90_A0A0U3FVI4	HTH domain-containing protein	NA
UHGV-1520895_48	eggNOG-mapper	1121468.AUBR01000003_gene609	transcriptional regulator, XRE family	NA
UHGV-1520895_48	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-1520895_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1520895_48	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-1520895_48	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1520895_48	Structural annotation	PF01381, PF13744, NF041951, COG3655, COG2944	NA	NA
UHGV-1520895_50	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1520895_50	UniRef90	UniRef90_UPI001C0170D2	NA	NA
UHGV-1520895_50	eggNOG-mapper	1226322.HMPREF1545_00295	NA	NA
UHGV-1520895_50	Pfam	PF06356	NA	DUF1064
UHGV-1520895_50	Structural annotation	PF06356	NA	NA
UHGV-1520895_51	Structural annotation	PF02767, MF_00317, TIGR00663, COG0592	NA	NA
UHGV-1520895_54	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1520895_54	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1520895_54	UniRef90	UniRef90_UPI00137A9A0F	ATP-binding protein	NA
UHGV-1520895_54	eggNOG-mapper	203119.Cthe_2467	IstB-like ATP binding protein	NA
UHGV-1520895_54	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1520895_54	NCBIFam	NF005992.0	hypothetical protein	NA
UHGV-1520895_54	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1520895_54	Structural annotation	PF01695, MF_00377, NF005992, COG1484	NA	NA
UHGV-1520895_55	PHROG	phrog_15768	NA	unknown function
UHGV-1520895_55	UniRef90	UniRef90_UPI001959E913	NA	NA
UHGV-1520895_55	eggNOG-mapper	203119.Cthe_2466	NA	NA
UHGV-1520895_55	AcrCatalog	cluster_38323	NA	NA
UHGV-1520895_55	Pfam	PF19808	NA	DUF6291
UHGV-1520895_55	Structural annotation	PF19808	NA	NA
UHGV-1520895_56	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1520895_56	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1520895_56	UniRef90	UniRef90_R5SNS5	Single-stranded DNA-binding protein	NA
UHGV-1520895_56	eggNOG-mapper	1519439.JPJG01000082_gene432	Single-strand binding protein family	NA
UHGV-1520895_56	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1520895_56	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1520895_56	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1520895_56	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1520895_56	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1520895_57	PHROG	phrog_7566	NA	unknown function
UHGV-1520895_57	UniRef90	UniRef90_A0A3A5TWB4	Phosphoenolpyruvate carboxykinase	NA
UHGV-1520895_58	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1520895_58	UniRef90	UniRef90_UPI000C7BF263	recombination protein NinB	NA
UHGV-1520895_58	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-1520895_58	Structural annotation	PF05772	NA	NA
UHGV-1520895_59	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1520895_59	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-1520895_59	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-1520895_59	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-1520895_60	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1520895_60	UniRef90	UniRef90_A0A8D9PDS3	Resistance protein	NA
UHGV-1520895_60	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-1520895_60	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1520895_60	Structural annotation	PF05565	NA	NA
UHGV-1520895_62	PHROG	phrog_22529	NA	unknown function
UHGV-1520895_62	UniRef90	UniRef90_A0A352RPR8	3D domain-containing protein	NA
UHGV-1520895_62	eggNOG-mapper	1298920.KI911353_gene568	3D domain	NA
UHGV-1520895_62	Pfam	PF06725	3D domain	3D
UHGV-1520895_62	COG	COG3584	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	NA
UHGV-1520895_62	Structural annotation	PF06725, MF_02071, NF040670, COG3584	NA	NA
UHGV-1520895_65	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1520895_65	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1520895_65	UniRef90	UniRef90_A0A810PZI0	HTH cro/C1-type domain-containing protein	NA
UHGV-1520895_65	eggNOG-mapper	1203606.HMPREF1526_00248	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1520895_65	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-1520895_65	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1520895_65	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1520895_66	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1520895_66	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1520895_66	UniRef90	UniRef90_A0A212J3J9	HTH cro/C1-type domain-containing protein	NA
UHGV-1520895_66	eggNOG-mapper	873447.SPB_1689	sequence-specific DNA binding	NA
UHGV-1520895_66	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1520895_66	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1520895_66	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-1520895_70	PHROG	phrog_301	secreted protein	other
UHGV-1520895_70	eggNOG-mapper	1262449.CP6013_2082	NA	NA
UHGV-1520895_70	Structural annotation	PF11631, TIGR03066	NA	NA
UHGV-1520895_71	eggNOG-mapper	1280676.AUJO01000016_gene1107	Putative restriction endonuclease	NA
UHGV-1520895_71	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1520895_71	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-1520895_71	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-1520895_72	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1520895_72	PHROG	phrog_95	integrase	integration and excision
UHGV-1520895_72	UniRef90	UniRef90_A0A3A9ED02	Site-specific recombinase	NA
UHGV-1520895_72	eggNOG-mapper	357809.Cphy_2997	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-1520895_72	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1520895_72	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1520895_72	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1520895_72	Structural annotation	PF00239, NF041201, COG1961	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1520895	Yes	40,479 bps	54.23%	100.00%	0.9810
UHGV-1734619	No	17,768 bps	53.58%	44.34%	0.9832