vOTU-059164

Overview

vOTU representative UHGV-1952138

No. of genomes 14

Genome length 36,101 bps

Completeness 100.00% (complete)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059164
Number of genomes	14
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00077 › vGENUS-00717 › vSUBGEN-14150 › vOTU-059164
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1952138
BioSample	NA
Genome length	36,101 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	59
CDS density	92.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1952138_1	UniRef90	UniRef90_A0A843GWV6	Rubrerythrin domain-containing protein	NA
UHGV-1952138_3	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1952138_6	AcrCatalog	cluster_39973	NA	NA
UHGV-1952138_7	UniRef90	UniRef90_A0A6N3FXW7	Helix-turn-helix	NA
UHGV-1952138_7	eggNOG-mapper	742738.HMPREF9460_04059	Helix-turn-helix XRE-family like proteins	NA
UHGV-1952138_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1952138_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1952138_7	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1952138_8	eggNOG-mapper	742740.HMPREF9474_00056	NA	NA
UHGV-1952138_8	Structural annotation	TIGR03826	NA	NA
UHGV-1952138_9	UniRef90	UniRef90_A0A8D9PDQ3	ECF sigma factor	NA
UHGV-1952138_9	Structural annotation	PF04545, MF_00674, NF008895, COG1342	NA	NA
UHGV-1952138_10	KOfam	K17733	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	NA
UHGV-1952138_10	PHROG	phrog_6523	endolysin	lysis
UHGV-1952138_10	UniRef90	UniRef90_R5RXG6	Serine-type D-Ala-D-Ala carboxypeptidase	NA
UHGV-1952138_10	eggNOG-mapper	1519439.JPJG01000023_gene536	D-alanyl-D-alanine carboxypeptidase	NA
UHGV-1952138_10	Pfam	PF13539	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
UHGV-1952138_10	COG	COG1876	LD-carboxypeptidase LdcB, LAS superfamily	NA
UHGV-1952138_10	Structural annotation	PF02557, MF_01924, NF000380, COG1876	NA	NA
UHGV-1952138_11	PHROG	phrog_13256	NA	unknown function
UHGV-1952138_11	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-1952138_13	PHROG	phrog_937	hemolysin	other
UHGV-1952138_13	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-1952138_14	PHROG	phrog_27545	NA	unknown function
UHGV-1952138_14	UniRef90	UniRef90_D1PRE7	Glycosyl hydrolase, family 18 family protein	NA
UHGV-1952138_14	eggNOG-mapper	1519439.JPJG01000060_gene1895	NA	NA
UHGV-1952138_14	Structural annotation	PF16170	NA	NA
UHGV-1952138_16	KOfam	K19721	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	NA
UHGV-1952138_16	PHROG	phrog_21962	tail protein	tail
UHGV-1952138_16	UniRef90	UniRef90_A0A858MRS5	Putative tail fiber protein	NA
UHGV-1952138_16	eggNOG-mapper	1519439.JPJG01000060_gene1892	Collagen triple helix repeat (20 copies)	NA
UHGV-1952138_16	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1952138_16	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-1952138_18	Structural annotation	PF20942, NF041894, COG5456	NA	NA
UHGV-1952138_19	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-1952138_19	Structural annotation	PF14594	NA	NA
UHGV-1952138_20	PHROG	phrog_6616	tail protein	tail
UHGV-1952138_20	UniRef90	UniRef90_A0A2Z4QA17	KID repeat-containing protein	NA
UHGV-1952138_20	eggNOG-mapper	1235797.C816_04180	NA	NA
UHGV-1952138_20	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-1952138_21	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1952138_22	PHROG	phrog_23464	NA	unknown function
UHGV-1952138_22	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-1952138_22	COG	COG5412	Phage-related protein	NA
UHGV-1952138_22	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-1952138_24	Structural annotation	PF11836, TIGR01674	NA	NA
UHGV-1952138_25	PHROG	phrog_88	major tail protein	tail
UHGV-1952138_25	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1952138_25	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-1952138_26	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1952138_26	UniRef90	UniRef90_R5IIS5	HK97 gp10 family phage protein	NA
UHGV-1952138_26	eggNOG-mapper	397290.C810_00425	NA	NA
UHGV-1952138_26	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1952138_26	Structural annotation	TIGR01725	NA	NA
UHGV-1952138_27	eggNOG-mapper	1203606.HMPREF1526_00975	NA	NA
UHGV-1952138_27	Structural annotation	PF05657	NA	NA
UHGV-1952138_28	PHROG	phrog_25	head closure Hc1	connector
UHGV-1952138_28	UniRef90	UniRef90_A0A845R2W2	Head-tail adaptor protein	NA
UHGV-1952138_28	eggNOG-mapper	1540257.JQMW01000004_gene414	head-tail adaptor	NA
UHGV-1952138_28	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1952138_28	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1952138_28	COG	COG5614	Phage head-tail adaptor	NA
UHGV-1952138_28	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1952138_29	UniRef90	UniRef90_UPI0002DDE99A	head-tail connector protein	NA
UHGV-1952138_29	eggNOG-mapper	693746.OBV_20060	NA	NA
UHGV-1952138_29	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-1952138_29	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1952138_30	PHROG	phrog_10	major head protein	head and packaging
UHGV-1952138_30	UniRef90	UniRef90_UPI001BB4749F	phage major capsid protein	NA
UHGV-1952138_30	eggNOG-mapper	742740.HMPREF9474_04304	Phage capsid family	NA
UHGV-1952138_30	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1952138_30	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1952138_30	Structural annotation	PF05065, PF14182, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1952138_31	PHROG	phrog_16951	NA	unknown function
UHGV-1952138_31	eggNOG-mapper	742738.HMPREF9460_04070	NA	NA
UHGV-1952138_31	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1952138_32	PHROG	phrog_12	portal protein	head and packaging
UHGV-1952138_32	UniRef90	UniRef90_UPI0013EF1526	phage portal protein	NA
UHGV-1952138_32	eggNOG-mapper	1007103.AFHW01000142_gene1297	Phage portal protein	NA
UHGV-1952138_32	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1952138_32	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1952138_32	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1952138_32	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1952138_33	PHROG	phrog_502	membrane protein	moron, auxiliary metabolic gene and host takeover
UHGV-1952138_34	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1952138_34	UniRef90	UniRef90_UPI0019583763	terminase large subunit	NA
UHGV-1952138_34	eggNOG-mapper	1007096.BAGW01000012_gene2374	Phage Terminase	NA
UHGV-1952138_34	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1952138_34	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1952138_34	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1952138_34	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-1952138_35	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-1952138_35	UniRef90	UniRef90_UPI001EDE2A13	phage terminase small subunit P27 family	NA
UHGV-1952138_35	eggNOG-mapper	1007096.BAGW01000012_gene2373	Phage terminase, small subunit	NA
UHGV-1952138_35	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1952138_35	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-1952138_35	COG	COG3747	Phage terminase, small subunit	NA
UHGV-1952138_35	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1952138_36	PHROG	phrog_21498	NA	unknown function
UHGV-1952138_36	UniRef90	UniRef90_C7MM70	ParB-like nuclease	NA
UHGV-1952138_36	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-1952138_36	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1952138_36	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1952138_36	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1952138_36	Structural annotation	PF02195, PF05869, MF_02015, TIGR04285, TIGR01712, COG1475	NA	NA
UHGV-1952138_37	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1952138_37	UniRef90	UniRef90_UPI001C022B94	HNH endonuclease	NA
UHGV-1952138_37	eggNOG-mapper	693746.OBV_19960	HNH endonuclease	NA
UHGV-1952138_37	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1952138_37	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1952138_37	Structural annotation	PF01844, COG1403	NA	NA
UHGV-1952138_38	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1952138_38	eggNOG-mapper	742738.HMPREF9460_04063	NA	NA
UHGV-1952138_38	Structural annotation	PF21578	NA	NA
UHGV-1952138_39	Pfam	PF00627	UBA/TS-N domain	UBA
UHGV-1952138_42	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-1952138_42	UniRef90	UniRef90_A0A4U9RLZ8	NA	NA
UHGV-1952138_42	eggNOG-mapper	1567010.A0A0A7RU90_9VIRU	protein disulfide oxidoreductase activity	NA
UHGV-1952138_42	Structural annotation	PF12643, MF_01020, TIGR03188	NA	NA
UHGV-1952138_43	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-1952138_43	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1952138_43	UniRef90	UniRef90_A0A1C6E635	Methyltransferase	NA
UHGV-1952138_43	eggNOG-mapper	1329516.JPST01000005_gene1303	DNA methylase	NA
UHGV-1952138_43	PADLOC	MTase_II_00173	Type II methyltransferase	RM
UHGV-1952138_43	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1952138_43	COG	COG0863	DNA modification methylase	NA
UHGV-1952138_43	Structural annotation	PF01555, NF008572, COG0863	NA	NA
UHGV-1952138_44	UniRef90	UniRef90_A0A2V2EEG3	NA	NA
UHGV-1952138_47	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1952138_47	PHROG	phrog_27290	NA	unknown function
UHGV-1952138_47	UniRef90	UniRef90_UPI001BB4839F	ParB N-terminal domain-containing protein	NA
UHGV-1952138_47	eggNOG-mapper	1007096.BAGW01000033_gene1613	ParB-like nuclease domain	NA
UHGV-1952138_47	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1952138_47	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1952138_47	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1952138_47	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-1952138_48	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-1952138_48	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1952138_48	UniRef90	UniRef90_UPI001BB48231	ParA family protein	NA
UHGV-1952138_48	eggNOG-mapper	1007096.BAGW01000011_gene2363	Anion-transporting ATPase	NA
UHGV-1952138_48	Pfam	PF13614	AAA domain	AAA_31
UHGV-1952138_48	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-1952138_48	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-1952138_51	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1952138_51	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1952138_51	UniRef90	UniRef90_UPI00195856D7	AAA family ATPase	NA
UHGV-1952138_51	eggNOG-mapper	1226322.HMPREF1545_00095	DnaB-like helicase N terminal domain	NA
UHGV-1952138_51	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1952138_51	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1952138_51	COG	COG0305	Replicative DNA helicase	NA
UHGV-1952138_51	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-1952138_52	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1952138_52	UniRef90	UniRef90_UPI0002DD08A7	helix-turn-helix domain-containing protein	NA
UHGV-1952138_52	eggNOG-mapper	693746.OBV_19830	DnaD domain protein	NA
UHGV-1952138_52	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-1952138_52	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1952138_52	Structural annotation	PF20714, MF_01177, NF040582, COG3355	NA	NA
UHGV-1952138_54	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-1952138_54	UniRef90	UniRef90_UPI001C01DF91	helix-turn-helix transcriptional regulator	NA
UHGV-1952138_54	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-1952138_54	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-1952138_54	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-1952138_54	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-1952138_55	Structural annotation	PF12728, NF040990	NA	NA
UHGV-1952138_56	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-1952138_56	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1952138_56	UniRef90	UniRef90_A0A645JJK5	HTH cro/C1-type domain-containing protein	NA
UHGV-1952138_56	eggNOG-mapper	658088.HMPREF0987_00908	Helix-turn-helix domain	NA
UHGV-1952138_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1952138_56	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1952138_56	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1952138_57	UniRef90	UniRef90_UPI001F3372B8	helix-turn-helix domain-containing protein	NA
UHGV-1952138_57	eggNOG-mapper	563038.HMPREF0851_00561	Peptidase S24-like	NA
UHGV-1952138_57	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1952138_57	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-1952138_57	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-1952138_58	PHROG	phrog_17982	NA	unknown function
UHGV-1952138_58	eggNOG-mapper	1284686.HMPREF1630_01985	NA	NA
UHGV-1952138_58	Pfam	PF14020	NA	DUF4236
UHGV-1952138_58	Structural annotation	PF14020	NA	NA
UHGV-1952138_59	KOfam	K14059	int; integrase	NA
UHGV-1952138_59	PHROG	phrog_1	integrase	integration and excision
UHGV-1952138_59	UniRef90	UniRef90_A0A1H8A220	Site-specific recombinase XerD	NA
UHGV-1952138_59	eggNOG-mapper	1203606.HMPREF1526_00215	Phage integrase family	NA
UHGV-1952138_59	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1952138_59	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1952138_59	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1952138_59	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1952138	Yes	36,101 bps	59.99%	100.00%	0.9773
UHGV-1981672	No	36,330 bps	59.92%	99.90%	0.9776
UHGV-0213432	No	34,598 bps	60.02%	97.24%	0.9792
UHGV-2230490	No	33,320 bps	60.08%	93.67%	0.9785
UHGV-0161883	No	21,547 bps	61.54%	60.39%	0.9799
UHGV-1958265	No	18,569 bps	58.07%	52.71%	0.9759
UHGV-1882348	No	18,516 bps	60.71%	52.11%	0.9813
UHGV-1918875	No	15,846 bps	59.18%	44.97%	0.9756
UHGV-1901149	No	15,886 bps	58.93%	44.86%	0.9747
UHGV-1947344	No	13,151 bps	59.37%	37.32%	0.9797
UHGV-2216176	No	12,510 bps	58.37%	35.36%	0.9742
UHGV-2228207	No	10,956 bps	59.16%	30.79%	0.9815
UHGV-2221947	No	10,876 bps	59.28%	30.73%	0.9793
UHGV-1557851	No	10,155 bps	59.36%	28.53%	0.9808