vOTU-059245

Overview

vOTU representative UHGV-2001302

No. of genomes 5

Genome length 37,044 bps

Completeness 100.00% (complete)

Host Hungatella sp005845265

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059245
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-01599 › vGENUS-05904 › vSUBGEN-19037 › vOTU-059245
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Hungatella › Hungatella sp005845265
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-2001302
BioSample	SAMEA2579962
Genome length	37,044 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	65
CDS density	89.19%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2001302_1	Structural annotation	PF06141	NA	NA
UHGV-2001302_2	Structural annotation	TIGR01725	NA	NA
UHGV-2001302_3	eggNOG-mapper	596315.HMPREF0634_0222	head-tail adaptor	NA
UHGV-2001302_3	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2001302_3	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2001302_4	PHROG	phrog_5223	neck protein	connector
UHGV-2001302_4	UniRef90	UniRef90_A0A174XSK5	NA	NA
UHGV-2001302_4	eggNOG-mapper	411465.PEPMIC_00737	NA	NA
UHGV-2001302_4	Structural annotation	TIGR01560	NA	NA
UHGV-2001302_5	PHROG	phrog_10	major head protein	head and packaging
UHGV-2001302_5	UniRef90	UniRef90_A0A174XIH6	Phage major capsid protein, HK97 family	NA
UHGV-2001302_5	eggNOG-mapper	1280689.AUJC01000011_gene1521	Phage major capsid protein, HK97 family	NA
UHGV-2001302_5	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2001302_5	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2001302_5	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2001302_5	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2001302_6	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2001302_6	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2001302_6	UniRef90	UniRef90_A0A174XQS2	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2001302_6	eggNOG-mapper	1280689.AUJC01000011_gene1520	Belongs to the peptidase S14 family	NA
UHGV-2001302_6	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2001302_6	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2001302_6	Structural annotation	PF00574, MF_00444, NF011091, COG0740	NA	NA
UHGV-2001302_7	PHROG	phrog_12	portal protein	head and packaging
UHGV-2001302_7	UniRef90	UniRef90_A0A174XIL2	Prophage lambdaBa04, portal protein	NA
UHGV-2001302_7	eggNOG-mapper	1235793.C809_01918	Phage portal protein	NA
UHGV-2001302_7	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2001302_7	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2001302_7	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2001302_8	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2001302_8	UniRef90	UniRef90_A0A174XWB0	Phage terminase, large subunit	NA
UHGV-2001302_8	eggNOG-mapper	1235793.C809_01917	Phage Terminase	NA
UHGV-2001302_8	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2001302_8	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2001302_8	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2001302_8	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2001302_9	PHROG	phrog_1066	NA	unknown function
UHGV-2001302_9	eggNOG-mapper	1235793.C809_01916	NA	NA
UHGV-2001302_9	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2001302_10	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2001302_10	UniRef90	UniRef90_A0A174XSZ8	Prophage LambdaBa04, GP54	NA
UHGV-2001302_10	eggNOG-mapper	318464.IO99_13775	HNH nucleases	NA
UHGV-2001302_10	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2001302_12	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-2001302_12	PHROG	phrog_216	integrase	integration and excision
UHGV-2001302_12	UniRef90	UniRef90_A0A174XIE7	Site-specific recombinase XerD	NA
UHGV-2001302_12	eggNOG-mapper	1235793.C809_02656	PFAM Phage integrase family	NA
UHGV-2001302_12	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2001302_12	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2001302_12	Structural annotation	PF00589, MF_02055, NF040815, COG4973	NA	NA
UHGV-2001302_13	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2001302_13	UniRef90	UniRef90_A0A174XW92	Phage transcriptional regulator, RinA family	NA
UHGV-2001302_13	eggNOG-mapper	1122919.KB905569_gene2945	Transcriptional regulator, RinA family	NA
UHGV-2001302_13	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-2001302_13	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-2001302_14	PHROG	phrog_6568	NA	unknown function
UHGV-2001302_14	eggNOG-mapper	742740.HMPREF9474_02283	NA	NA
UHGV-2001302_15	PHROG	phrog_25231	NA	unknown function
UHGV-2001302_15	Structural annotation	PF04936	NA	NA
UHGV-2001302_16	KOfam	K03733	xerC; integrase/recombinase XerC	NA
UHGV-2001302_16	PHROG	phrog_1	integrase	integration and excision
UHGV-2001302_16	UniRef90	UniRef90_A0A174XQN6	Site-specific recombinase XerD	NA
UHGV-2001302_16	eggNOG-mapper	762984.HMPREF9445_01343	Belongs to the 'phage' integrase family	NA
UHGV-2001302_16	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-2001302_16	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2001302_16	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2001302_16	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-2001302_17	UniRef90	UniRef90_UPI00164D7607	NA	NA
UHGV-2001302_18	UniRef90	UniRef90_A0A413WS40	Ribbon-helix-helix protein, CopG family	NA
UHGV-2001302_18	Structural annotation	PF01402, NF041793, COG3905	NA	NA
UHGV-2001302_21	PHROG	phrog_2600	NA	unknown function
UHGV-2001302_21	eggNOG-mapper	1178540.BA70_18565	NA	NA
UHGV-2001302_23	AcrCatalog	cluster_222026	NA	NA
UHGV-2001302_25	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2001302_25	UniRef90	UniRef90_A0A174X928	LexA repressor LexA	NA
UHGV-2001302_25	eggNOG-mapper	1304866.K413DRAFT_1203	LexA DNA binding domain	NA
UHGV-2001302_25	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-2001302_25	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2001302_25	Structural annotation	PF01726, MF_00732, TIGR02944, COG1321	NA	NA
UHGV-2001302_27	PHROG	phrog_8489	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2001302_27	UniRef90	UniRef90_A0A174X4J3	Phage replication initiation protein	NA
UHGV-2001302_27	eggNOG-mapper	575609.HMPREF0629_01204	DnaD domain protein	NA
UHGV-2001302_27	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2001302_27	Structural annotation	PF09681, TIGR01714	NA	NA
UHGV-2001302_28	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2001302_28	UniRef90	UniRef90_A0A174XC96	AP2 domain-containing protein	NA
UHGV-2001302_28	eggNOG-mapper	86416.Clopa_2526	AP2 domain	NA
UHGV-2001302_28	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-2001302_28	Structural annotation	PF17375	NA	NA
UHGV-2001302_29	PHROG	phrog_398	NA	unknown function
UHGV-2001302_29	UniRef90	UniRef90_UPI0011780B2F	putative HNHc nuclease	NA
UHGV-2001302_29	eggNOG-mapper	33035.JPJF01000122_gene2462	Putative HNHc nuclease	NA
UHGV-2001302_29	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-2001302_29	Structural annotation	PF16784	NA	NA
UHGV-2001302_30	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2001302_30	UniRef90	UniRef90_A0A174X4H7	Recombination function protein	NA
UHGV-2001302_30	eggNOG-mapper	1298920.KI911353_gene4870	ERF superfamily	NA
UHGV-2001302_30	Pfam	PF04404	ERF superfamily	ERF
UHGV-2001302_30	Structural annotation	PF04404, COG4712	NA	NA
UHGV-2001302_31	PHROG	phrog_674	NA	unknown function
UHGV-2001302_31	UniRef90	UniRef90_A0A413WRE4	NA	NA
UHGV-2001302_31	eggNOG-mapper	411460.RUMTOR_02065	NA	NA
UHGV-2001302_31	Pfam	PF07083	NA	DUF1351
UHGV-2001302_31	Structural annotation	PF07083	NA	NA
UHGV-2001302_33	PHROG	phrog_30542	NA	unknown function
UHGV-2001302_40	PHROG	phrog_750	NA	unknown function
UHGV-2001302_40	eggNOG-mapper	742723.HMPREF9477_00931	NA	NA
UHGV-2001302_40	Structural annotation	PF03444, COG5045	NA	NA
UHGV-2001302_41	PHROG	phrog_643	transcriptional regulator	transcription regulation
UHGV-2001302_41	UniRef90	UniRef90_UPI0003644948	NA	NA
UHGV-2001302_41	eggNOG-mapper	562743.JH976434_gene1050	NA	NA
UHGV-2001302_41	Structural annotation	PF11195	NA	NA
UHGV-2001302_44	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-2001302_44	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2001302_44	UniRef90	UniRef90_A0A174X4D4	XRE family transcriptional regulator	NA
UHGV-2001302_44	eggNOG-mapper	1235798.C817_05486	Helix-turn-helix XRE-family like proteins	NA
UHGV-2001302_44	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-2001302_44	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2001302_44	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-2001302_46	UniRef90	UniRef90_A0A174XDL8	TM2 domain	NA
UHGV-2001302_46	Pfam	PF05154	TM2 domain	TM2
UHGV-2001302_47	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2001302_47	PHROG	phrog_95	integrase	integration and excision
UHGV-2001302_47	UniRef90	UniRef90_UPI000B855A4E	recombinase family protein	NA
UHGV-2001302_47	eggNOG-mapper	748224.HMPREF9436_01242	NA	NA
UHGV-2001302_47	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2001302_47	Pfam	PF07508	Recombinase	Recombinase
UHGV-2001302_47	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2001302_47	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2001302_47	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-2001302_49	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2001302_49	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2001302_49	UniRef90	UniRef90_A0A413LAM0	XRE family transcriptional regulator	NA
UHGV-2001302_49	eggNOG-mapper	1304866.K413DRAFT_1516	Helix-turn-helix XRE-family like proteins	NA
UHGV-2001302_49	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2001302_49	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2001302_49	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-2001302_50	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-2001302_50	UniRef90	UniRef90_D3AUA1	Bro-N domain-containing protein (Fragment)	NA
UHGV-2001302_50	eggNOG-mapper	397290.C810_01420	BRO family, N-terminal domain	NA
UHGV-2001302_50	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-2001302_50	COG	COG3617	Prophage antirepressor	NA
UHGV-2001302_50	Structural annotation	PF02498, NF033622, COG3617	NA	NA
UHGV-2001302_51	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-2001302_51	PHROG	phrog_3088	amidase	lysis
UHGV-2001302_51	UniRef90	UniRef90_A0A174XN03	Putative N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2001302_51	eggNOG-mapper	1151292.QEW_0991	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-2001302_51	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2001302_51	Pfam	PF01473	Putative cell wall binding repeat	Choline_bind_1
UHGV-2001302_51	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2001302_51	Structural annotation	PF01510, PF19127, MF_04111, NF008758, TIGR04035, COG5632	NA	NA
UHGV-2001302_52	PHROG	phrog_1129	holin	lysis
UHGV-2001302_52	UniRef90	UniRef90_A0A2N0KEV2	Enolase	NA
UHGV-2001302_52	eggNOG-mapper	742740.HMPREF9474_03522	NA	NA
UHGV-2001302_52	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-2001302_52	Structural annotation	PF06946	NA	NA
UHGV-2001302_53	PHROG	phrog_1863	NA	unknown function
UHGV-2001302_53	UniRef90	UniRef90_UPI001F223E8B	hemolysin XhlA family protein	NA
UHGV-2001302_53	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-2001302_54	Structural annotation	NF040910	NA	NA
UHGV-2001302_55	eggNOG-mapper	742740.HMPREF9474_04291	NA	NA
UHGV-2001302_57	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-2001302_57	PHROG	phrog_5073	tail fiber protein	tail
UHGV-2001302_57	UniRef90	UniRef90_UPI0012D87B5B	collagen-like protein	NA
UHGV-2001302_57	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2001302_58	KOfam	K07296	ADIPOQ, ACDC; adiponectin	NA
UHGV-2001302_58	PHROG	phrog_6320	tail fiber protein	tail
UHGV-2001302_58	UniRef90	UniRef90_A0A174XQW7	Collagen triple helix repeat-containing protein	NA
UHGV-2001302_58	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2001302_58	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2001302_59	PHROG	phrog_12764	NA	unknown function
UHGV-2001302_59	Structural annotation	PF01176, MF_00085, TIGR00523, COG0361	NA	NA
UHGV-2001302_60	PHROG	phrog_26795	NA	unknown function
UHGV-2001302_60	eggNOG-mapper	742740.HMPREF9474_04294	NA	NA
UHGV-2001302_60	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-2001302_61	PHROG	phrog_37549	virion structural protein	head and packaging
UHGV-2001302_61	UniRef90	UniRef90_UPI00189CF998	DNRLRE domain-containing protein	NA
UHGV-2001302_61	eggNOG-mapper	796940.HMPREF9628_00134	NA	NA
UHGV-2001302_61	NCBIFam	NF033679.1	DNRLRE domain-containing protein	NA
UHGV-2001302_61	Structural annotation	PF06995, PF02010, MF_04116, TIGR02126, NF041431, COG3499, COG2372	NA	NA
UHGV-2001302_62	PHROG	phrog_33680	NA	unknown function
UHGV-2001302_62	UniRef90	UniRef90_A0A174XMM8	Tail tape measure protein TP901 core region	NA
UHGV-2001302_62	eggNOG-mapper	742740.HMPREF9474_04296	Phage tail tape measure protein TP901	NA
UHGV-2001302_62	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2001302_62	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-2001302_65	PHROG	phrog_88	major tail protein	tail
UHGV-2001302_65	UniRef90	UniRef90_A0A174XIJ5	Phi13 family phage major tail protein	NA
UHGV-2001302_65	eggNOG-mapper	742740.HMPREF9474_04299	NA	NA
UHGV-2001302_65	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2001302_65	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2001302	Yes	37,044 bps	43.09%	100.00%	0.9771
UHGV-1444509	No	37,056 bps	43.10%	99.92%	0.9773
UHGV-1393206	No	19,391 bps	43.77%	52.47%	0.9782
UHGV-0048787	No	18,946 bps	43.87%	51.25%	0.9770
UHGV-1587103	No	18,140 bps	43.86%	49.23%	0.9775