vOTU-059247

Overview

vOTU representative UHGV-2002747

No. of genomes 4

Genome length 40,952 bps

Completeness 100.00% (complete)

Host Veillonella parvula A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059247
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00086 › vGENUS-00106 › vSUBGEN-00067 › vOTU-059247
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella › Veillonella parvula A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2002747
BioSample	NA
Genome length	40,952 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	48
CDS density	93.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2002747_1	eggNOG-mapper	1128111.HMPREF0870_01756	gp58-like protein	NA
UHGV-2002747_1	COG	COG1511	NA	NA
UHGV-2002747_2	KOfam	K13695	nlpC; probable lipoprotein NlpC	NA
UHGV-2002747_2	PHROG	phrog_329	minor tail protein	tail
UHGV-2002747_2	UniRef90	UniRef90_UPI00068174D5	NlpC/P60 family protein	NA
UHGV-2002747_2	eggNOG-mapper	1128111.HMPREF0870_01757	cysteine-type peptidase activity	NA
UHGV-2002747_2	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-2002747_2	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2002747_2	Structural annotation	PF00877, NF008096, COG3234	NA	NA
UHGV-2002747_3	PHROG	phrog_18	minor tail protein	tail
UHGV-2002747_3	UniRef90	UniRef90_A0A380N670	Phage minor tail protein L	NA
UHGV-2002747_3	eggNOG-mapper	1128111.HMPREF0870_01758	Phage minor tail protein L	NA
UHGV-2002747_3	Pfam	PF05100	Phage minor tail protein L	Phage_tail_L
UHGV-2002747_3	COG	COG4672	Phage tail protein	NA
UHGV-2002747_3	Structural annotation	PF08875, TIGR01600, COG4672	NA	NA
UHGV-2002747_4	eggNOG-mapper	1009370.ALO_04658	NA	NA
UHGV-2002747_4	Structural annotation	PF05939, TIGR02217, COG4718	NA	NA
UHGV-2002747_5	PHROG	phrog_22443	NA	unknown function
UHGV-2002747_5	UniRef90	UniRef90_F5KZN7	Phage tail tape measure protein, lambda family	NA
UHGV-2002747_5	eggNOG-mapper	1128111.HMPREF0870_01760	Putative exonuclease SbcCD, C subunit	NA
UHGV-2002747_5	Pfam	PF09718	Lambda phage tail tape-measure protein (Tape_meas_lam_C)	Tape_meas_lam_C
UHGV-2002747_5	COG	COG4913	NA	NA
UHGV-2002747_5	Structural annotation	PF20155, PF06120, TIGR02338, TIGR01541, COG5281	NA	NA
UHGV-2002747_6	PHROG	phrog_27248	NA	unknown function
UHGV-2002747_7	PHROG	phrog_290	minor tail protein	tail
UHGV-2002747_7	UniRef90	UniRef90_UPI001E4C5382	phage tail tube protein	NA
UHGV-2002747_7	eggNOG-mapper	1128111.HMPREF0870_01763	NA	NA
UHGV-2002747_7	Pfam	PF18906	Phage tail tube protein	Phage_tube_2
UHGV-2002747_7	Structural annotation	PF18906, TIGR02241, TIGR02126, COG5437, COG3498	NA	NA
UHGV-2002747_8	PHROG	phrog_17431	NA	unknown function
UHGV-2002747_8	eggNOG-mapper	1128111.HMPREF0870_01764	NA	NA
UHGV-2002747_8	Structural annotation	PF20765, COG5003	NA	NA
UHGV-2002747_9	PHROG	phrog_222	tail protein	tail
UHGV-2002747_9	UniRef90	UniRef90_F5KZN2	Conserved domain protein	NA
UHGV-2002747_9	eggNOG-mapper	1128111.HMPREF0870_01765	NA	NA
UHGV-2002747_9	Structural annotation	PF05069, TIGR01725	NA	NA
UHGV-2002747_10	PHROG	phrog_27032	NA	unknown function
UHGV-2002747_10	Structural annotation	PF05354, TIGR01563, COG5614	NA	NA
UHGV-2002747_11	PHROG	phrog_122	head decoration	head and packaging
UHGV-2002747_11	UniRef90	UniRef90_A0A6L9HL55	NA	NA
UHGV-2002747_11	eggNOG-mapper	572547.Amico_1119	NA	NA
UHGV-2002747_11	Pfam	PF09956	NA	DUF2190
UHGV-2002747_11	COG	COG5471	Predicted phage recombinase, RecA/RadA family	NA
UHGV-2002747_11	Structural annotation	PF09956, COG5471	NA	NA
UHGV-2002747_12	KOfam	K06904	NA	NA
UHGV-2002747_12	PHROG	phrog_4523	major head and protease protein	head and packaging
UHGV-2002747_12	UniRef90	UniRef90_A0A2S7YZ16	Peptidase	NA
UHGV-2002747_12	eggNOG-mapper	1128111.HMPREF0870_01768	Caudovirus prohead protease	NA
UHGV-2002747_12	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2002747_12	Pfam	PF10124	Mu-like prophage major head subunit gpT	Mu-like_gpT
UHGV-2002747_12	COG	COG3087	Cell division protein FtsN	NA
UHGV-2002747_12	Structural annotation	PF19821, PF04586, MF_04119, TIGR04387, TIGR01543, COG3740, COG4653	NA	NA
UHGV-2002747_13	PHROG	phrog_21	portal protein	head and packaging
UHGV-2002747_13	UniRef90	UniRef90_A0A2S7YZ05	Phage portal protein	NA
UHGV-2002747_13	eggNOG-mapper	1128111.HMPREF0870_01769	Phage portal protein, lambda family	NA
UHGV-2002747_13	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-2002747_13	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-2002747_13	COG	COG5511	Phage capsid protein	NA
UHGV-2002747_13	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-2002747_14	PHROG	phrog_20307	NA	unknown function
UHGV-2002747_14	UniRef90	UniRef90_F5KZM7	Conserved domain protein	NA
UHGV-2002747_14	Structural annotation	PF19645, COG1382	NA	NA
UHGV-2002747_15	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-2002747_15	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-2002747_15	UniRef90	UniRef90_A0A2S7YYZ0	Terminase	NA
UHGV-2002747_15	eggNOG-mapper	1128111.HMPREF0870_01771	Phage terminase large subunit (GpA)	NA
UHGV-2002747_15	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-2002747_15	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-2002747_15	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-2002747_15	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-2002747_16	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-2002747_16	eggNOG-mapper	1128111.HMPREF0870_01772	transposase activity	NA
UHGV-2002747_16	COG	COG4220	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-2002747_17	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2002747_17	UniRef90	UniRef90_U7UBY9	PF07374 family protein	NA
UHGV-2002747_17	eggNOG-mapper	1111454.HMPREF1250_0009	NA	NA
UHGV-2002747_17	Pfam	PF07374	NA	DUF1492
UHGV-2002747_17	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-2002747_18	Structural annotation	PF18895, NF009243	NA	NA
UHGV-2002747_20	PHROG	phrog_236	nucleotide kinase	other
UHGV-2002747_20	UniRef90	UniRef90_UPI00098A44D4	NA	NA
UHGV-2002747_20	eggNOG-mapper	546273.VEIDISOL_00707	NA	NA
UHGV-2002747_20	Pfam	PF11753	NA	DUF3310
UHGV-2002747_20	Structural annotation	PF11753	NA	NA
UHGV-2002747_21	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-2002747_21	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2002747_21	UniRef90	UniRef90_A0A2S7YZ18	DEAD/DEAH box helicase	NA
UHGV-2002747_21	eggNOG-mapper	706434.HMPREF9429_00390	SNF2 family N-terminal domain protein	NA
UHGV-2002747_21	PADLOC	DpdE_00010	DpdE	DPD
UHGV-2002747_21	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-2002747_21	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-2002747_21	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-2002747_21	Structural annotation	PF16203, PF04851, MF_01821, NF041790, COG0553	NA	NA
UHGV-2002747_22	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2002747_22	UniRef90	UniRef90_A0A2S7YZ17	VRR-NUC domain-containing protein	NA
UHGV-2002747_22	eggNOG-mapper	1128111.HMPREF0870_01778	VRR_NUC	NA
UHGV-2002747_22	Structural annotation	PF01974, MF_01490, NF011269	NA	NA
UHGV-2002747_23	PHROG	phrog_256	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2002747_23	UniRef90	UniRef90_A0A2S7YZ26	Virulence-associated protein E	NA
UHGV-2002747_23	eggNOG-mapper	706434.HMPREF9429_00392	Virulence-associated protein E	NA
UHGV-2002747_23	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-2002747_23	COG	COG5545	Predicted P-loop ATPase and inactivated derivatives	NA
UHGV-2002747_23	Structural annotation	PF05272, MF_04000, NF005477, NF040562, COG5545	NA	NA
UHGV-2002747_24	KOfam	K02334	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	NA
UHGV-2002747_24	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-2002747_24	UniRef90	UniRef90_A0A2S7YZ14	POLAc domain-containing protein	NA
UHGV-2002747_24	eggNOG-mapper	1128111.HMPREF0870_01780	DNA polymerase	NA
UHGV-2002747_24	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-2002747_24	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-2002747_24	Structural annotation	PF00476, MF_04101, NF011540, COG0749	NA	NA
UHGV-2002747_25	PHROG	phrog_112	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2002747_25	UniRef90	UniRef90_A0A2S7YZ12	NA	NA
UHGV-2002747_25	eggNOG-mapper	706434.HMPREF9429_00394	NA	NA
UHGV-2002747_25	Pfam	PF10991	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
UHGV-2002747_25	Structural annotation	PF10991, MF_04153, NF005241	NA	NA
UHGV-2002747_26	PHROG	phrog_69	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2002747_26	UniRef90	UniRef90_A0A2S7YZ00	NA	NA
UHGV-2002747_26	eggNOG-mapper	706434.HMPREF9429_00395	NA	NA
UHGV-2002747_26	Pfam	PF10926	NA	DUF2800
UHGV-2002747_26	COG	COG2887	RecB family exonuclease	NA
UHGV-2002747_26	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-2002747_27	PHROG	phrog_18562	NA	unknown function
UHGV-2002747_27	eggNOG-mapper	592028.GCWU000321_01361	NA	NA
UHGV-2002747_28	KOfam	K24451	zim; modification methylase	NA
UHGV-2002747_28	PHROG	phrog_67	DNA methyltransferase	other
UHGV-2002747_28	UniRef90	UniRef90_A0A2S7YZ09	Methyltransferase	NA
UHGV-2002747_28	eggNOG-mapper	1111454.HMPREF1250_1036	DNA methylase	NA
UHGV-2002747_28	PADLOC	MTase_II_00139	Type II methyltransferase	RM
UHGV-2002747_28	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2002747_28	COG	COG0863	DNA modification methylase	NA
UHGV-2002747_28	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-2002747_29	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-2002747_29	UniRef90	UniRef90_UPI001D073C21	NA	NA
UHGV-2002747_29	eggNOG-mapper	883156.HMPREF9282_01229	NA	NA
UHGV-2002747_29	Pfam	PF14359	NA	DUF4406
UHGV-2002747_29	Structural annotation	PF14359	NA	NA
UHGV-2002747_30	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-2002747_30	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2002747_30	UniRef90	UniRef90_A0A2S7YZ25	Helicase	NA
UHGV-2002747_30	eggNOG-mapper	592028.GCWU000321_01359	DEAD-like helicases superfamily	NA
UHGV-2002747_30	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-2002747_30	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-2002747_30	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-2002747_30	Structural annotation	PF18766, PF16203, MF_01821, TIGR04095, COG0553	NA	NA
UHGV-2002747_31	PHROG	phrog_3489	NA	unknown function
UHGV-2002747_31	Structural annotation	PF19157	NA	NA
UHGV-2002747_33	PHROG	phrog_30876	NA	unknown function
UHGV-2002747_33	UniRef90	UniRef90_F5KZK9	Conserved domain protein	NA
UHGV-2002747_34	PHROG	phrog_6058	NA	unknown function
UHGV-2002747_34	Structural annotation	PF09035, NF033787	NA	NA
UHGV-2002747_35	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2002747_35	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2002747_35	UniRef90	UniRef90_UPI000989B3E6	helix-turn-helix domain-containing protein	NA
UHGV-2002747_35	eggNOG-mapper	1403946.Q615_SPAC00127G0164	Helix-turn-helix XRE-family like proteins	NA
UHGV-2002747_35	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2002747_35	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2002747_35	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2002747_36	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2002747_36	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2002747_36	UniRef90	UniRef90_UPI001D061FDD	XRE family transcriptional regulator	NA
UHGV-2002747_36	eggNOG-mapper	699218.HMPREF0889_0317	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2002747_36	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2002747_36	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2002747_36	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2002747_36	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-2002747_37	Structural annotation	PF15028, COG5342	NA	NA
UHGV-2002747_38	KOfam	K14059	int; integrase	NA
UHGV-2002747_38	PHROG	phrog_1	integrase	integration and excision
UHGV-2002747_38	UniRef90	UniRef90_A0A563DAX4	Site-specific integrase	NA
UHGV-2002747_38	eggNOG-mapper	883156.HMPREF9282_00919	Belongs to the 'phage' integrase family	NA
UHGV-2002747_38	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2002747_38	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2002747_38	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2002747_39	PHROG	phrog_2655	excisionase	integration and excision
UHGV-2002747_39	UniRef90	UniRef90_F5KZP9	HTH_59 domain-containing protein	NA
UHGV-2002747_39	eggNOG-mapper	1128111.HMPREF0870_00986	NA	NA
UHGV-2002747_39	Pfam	PF20038	Helix-turn-helix domain	HTH_59
UHGV-2002747_39	Structural annotation	PF20038, NF040990	NA	NA
UHGV-2002747_40	PHROG	phrog_18860	NA	unknown function
UHGV-2002747_41	PHROG	phrog_5867	endolysin	lysis
UHGV-2002747_41	UniRef90	UniRef90_A0A496P7H7	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2002747_41	eggNOG-mapper	1123288.SOV_2c01960	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2002747_41	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2002747_41	Structural annotation	MF_04111	NA	NA
UHGV-2002747_42	PHROG	phrog_27828	NA	unknown function
UHGV-2002747_42	UniRef90	UniRef90_F5KZP5	Conserved domain protein	NA
UHGV-2002747_42	eggNOG-mapper	706434.HMPREF9429_00507	NA	NA
UHGV-2002747_44	PHROG	phrog_22483	NA	unknown function
UHGV-2002747_44	UniRef90	UniRef90_A0A563DAK6	Lysyl-tRNA synthetase	NA
UHGV-2002747_44	eggNOG-mapper	706434.HMPREF9429_00509	NA	NA
UHGV-2002747_44	Structural annotation	PF17936, NF033814	NA	NA
UHGV-2002747_45	PHROG	phrog_1084	NA	unknown function
UHGV-2002747_45	Structural annotation	PF17813, NF038186	NA	NA
UHGV-2002747_46	PHROG	phrog_25213	NA	unknown function
UHGV-2002747_47	PHROG	phrog_2427	NA	unknown function
UHGV-2002747_48	PHROG	phrog_31	baseplate hub protein Tal	tail
UHGV-2002747_48	UniRef90	UniRef90_F5KZP0	Fibronectin type III domain protein	NA
UHGV-2002747_48	eggNOG-mapper	1128111.HMPREF0870_01756	gp58-like protein	NA
UHGV-2002747_48	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-2002747_48	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-2002747_48	NCBIFam	NF040662.1	host specificity factor TipJ family phage tail protein	NA
UHGV-2002747_48	COG	COG1511	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2002747	Yes	40,952 bps	42.91%	100.00%	0.9817
UHGV-0077039	No	41,284 bps	42.81%	99.90%	0.9815
UHGV-0190213	No	39,736 bps	42.95%	96.62%	0.9790
UHGV-1446039	No	24,831 bps	44.01%	60.47%	0.9816