vOTU-059248

Overview

vOTU representative UHGV-2002820

No. of genomes 7

Genome length 37,055 bps

Completeness 100.00% (complete)

Host Intestinibacter bartlettii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059248
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-04649 › vGENUS-08408 › vSUBGEN-08257 › vOTU-059248
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Intestinibacter › Intestinibacter bartlettii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2002820
BioSample	NA
Genome length	37,055 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	91.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2002820_1	UniRef90	UniRef90_A0A316S8M7	BppU_N domain-containing protein	NA
UHGV-2002820_1	eggNOG-mapper	411462.DORLON_00771	NA	NA
UHGV-2002820_1	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2002820_4	PHROG	phrog_3558	tail protein	tail
UHGV-2002820_4	UniRef90	UniRef90_UPI0004BA5C05	phage tail protein	NA
UHGV-2002820_4	eggNOG-mapper	1414720.CBYM010000001_gene709	Phage minor structural protein, N-terminal	NA
UHGV-2002820_4	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2002820_4	COG	COG4926	Phage-related protein	NA
UHGV-2002820_4	Structural annotation	PF06605, PF09931, TIGR01665, COG4926	NA	NA
UHGV-2002820_5	UniRef90	UniRef90_UPI0018A9CC06	phage tail family protein	NA
UHGV-2002820_5	eggNOG-mapper	1123298.KB904077_gene469	phage tail	NA
UHGV-2002820_5	COG	COG4722	Phage-related protein YomH	NA
UHGV-2002820_5	Structural annotation	PF20195, PF21621, TIGR01633, COG4722	NA	NA
UHGV-2002820_6	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-2002820_6	UniRef90	UniRef90_UPI000DCFD8A9	phage tail tape measure protein	NA
UHGV-2002820_6	eggNOG-mapper	1341151.ASZU01000004_gene253	Tail tape measure protein, TP901 family	NA
UHGV-2002820_6	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2002820_6	COG	COG4487	NA	NA
UHGV-2002820_6	Structural annotation	PF20155, TIGR02675, COG3941	NA	NA
UHGV-2002820_7	PHROG	phrog_709	NA	unknown function
UHGV-2002820_7	eggNOG-mapper	1211814.CAPG01000074_gene3447	NA	NA
UHGV-2002820_7	Structural annotation	PF11836	NA	NA
UHGV-2002820_8	PHROG	phrog_88	major tail protein	tail
UHGV-2002820_8	UniRef90	UniRef90_UPI00057C17E5	phage tail protein	NA
UHGV-2002820_8	eggNOG-mapper	202752.JL53_03780	phage tail protein	NA
UHGV-2002820_8	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2002820_8	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2002820_9	PHROG	phrog_78	tail terminator	connector
UHGV-2002820_9	UniRef90	UniRef90_A6XMK2	Aminopeptidase	NA
UHGV-2002820_9	eggNOG-mapper	396034.A6XMK2_9CAUD	aminopeptidase activity	NA
UHGV-2002820_9	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-2002820_10	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2002820_10	UniRef90	UniRef90_UPI001748A5D5	HK97 gp10 family phage protein	NA
UHGV-2002820_10	eggNOG-mapper	1341151.ASZU01000004_gene257	NA	NA
UHGV-2002820_10	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2002820_10	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2002820_11	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-2002820_11	UniRef90	UniRef90_A0A366JNI6	SPP1 family predicted phage head-tail adaptor	NA
UHGV-2002820_11	eggNOG-mapper	396034.A6XMK0_9CAUD	NA	NA
UHGV-2002820_11	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2002820_11	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2002820_12	PHROG	phrog_5223	neck protein	connector
UHGV-2002820_12	UniRef90	UniRef90_UPI000F062078	head-tail connector protein	NA
UHGV-2002820_12	eggNOG-mapper	931276.Cspa_c10180	NA	NA
UHGV-2002820_12	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2002820_12	Structural annotation	TIGR01560	NA	NA
UHGV-2002820_13	PHROG	phrog_10	major head protein	head and packaging
UHGV-2002820_13	UniRef90	UniRef90_UPI001034FBDB	phage major capsid protein	NA
UHGV-2002820_13	eggNOG-mapper	1382358.JHVN01000024_gene1707	Phage capsid family	NA
UHGV-2002820_13	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2002820_13	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2002820_13	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2002820_13	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2002820_14	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2002820_14	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2002820_14	UniRef90	UniRef90_UPI0018A9577E	Clp protease ClpP	NA
UHGV-2002820_14	eggNOG-mapper	931276.Cspa_c10160	Belongs to the peptidase S14 family	NA
UHGV-2002820_14	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2002820_14	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2002820_14	Structural annotation	PF00574, MF_00444, NF011091, COG0740	NA	NA
UHGV-2002820_15	PHROG	phrog_12	portal protein	head and packaging
UHGV-2002820_15	UniRef90	UniRef90_A0A090C6M0	Putative portal protein	NA
UHGV-2002820_15	eggNOG-mapper	1437363.A0A090C6M0_9CAUD	Phage portal protein	NA
UHGV-2002820_15	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2002820_15	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2002820_16	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2002820_16	UniRef90	UniRef90_UPI00097FF9FC	terminase large subunit	NA
UHGV-2002820_16	eggNOG-mapper	500633.CLOHIR_00364	Phage terminase-like protein large subunit	NA
UHGV-2002820_16	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2002820_16	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2002820_16	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2002820_16	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2002820_17	PHROG	phrog_1066	NA	unknown function
UHGV-2002820_17	eggNOG-mapper	1094508.Tsac_2428	NA	NA
UHGV-2002820_18	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2002820_18	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2002820_18	UniRef90	UniRef90_UPI000F06AC0F	HNH endonuclease	NA
UHGV-2002820_18	eggNOG-mapper	1280689.AUJC01000011_gene1516	endonuclease activity	NA
UHGV-2002820_18	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2002820_18	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2002820_20	PHROG	phrog_9079	NA	unknown function
UHGV-2002820_20	eggNOG-mapper	445973.CLOBAR_02450	NA	NA
UHGV-2002820_21	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2002820_21	UniRef90	UniRef90_A0A1C5XZI7	Sporulation sigma factor SigG	NA
UHGV-2002820_21	eggNOG-mapper	1151292.QEW_0398	sigma factor activity	NA
UHGV-2002820_21	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-2002820_21	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-2002820_21	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-2002820_24	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2002820_24	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2002820_24	UniRef90	UniRef90_UPI0011060A1D	single-stranded DNA-binding protein	NA
UHGV-2002820_24	eggNOG-mapper	445973.CLOBAR_00026	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-2002820_24	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2002820_24	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2002820_24	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2002820_24	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2002820_24	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2002820_27	PHROG	phrog_5164	NA	unknown function
UHGV-2002820_27	Structural annotation	PF06892	NA	NA
UHGV-2002820_28	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2002820_28	UniRef90	UniRef90_R4KA12	HTH myb-type domain-containing protein	NA
UHGV-2002820_28	eggNOG-mapper	756499.Desde_1065	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-2002820_28	Pfam	PF00249	Myb-like DNA-binding domain	Myb_DNA-binding
UHGV-2002820_28	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-2002820_28	Structural annotation	PF13936, NF040595, COG2771	NA	NA
UHGV-2002820_29	Pfam	PF07453	NUMOD1 domain	NUMOD1
UHGV-2002820_30	UniRef90	UniRef90_UPI00189AE1E0	NA	NA
UHGV-2002820_30	Pfam	PF18892	NA	DUF5651
UHGV-2002820_30	Structural annotation	PF18892	NA	NA
UHGV-2002820_31	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2002820_31	PHROG	phrog_15982	NA	unknown function
UHGV-2002820_31	UniRef90	UniRef90_A0A6N7YJE4	ParB domain-containing protein	NA
UHGV-2002820_31	eggNOG-mapper	742741.HMPREF9475_00414	NA	NA
UHGV-2002820_31	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2002820_31	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2002820_31	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-2002820_32	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2002820_32	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2002820_32	UniRef90	UniRef90_UPI00156DD98C	ParA family protein	NA
UHGV-2002820_32	eggNOG-mapper	411470.RUMGNA_00210	CobQ CobB MinD ParA nucleotide binding domain protein	NA
UHGV-2002820_32	Pfam	PF13614	AAA domain	AAA_31
UHGV-2002820_32	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2002820_32	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-2002820_33	PHROG	phrog_824	NA	unknown function
UHGV-2002820_33	UniRef90	UniRef90_UPI001105A33E	VRR-NUC domain-containing protein	NA
UHGV-2002820_33	eggNOG-mapper	411902.CLOBOL_03887	VRR_NUC	NA
UHGV-2002820_33	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2002820_34	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2002820_34	eggNOG-mapper	642492.Clole_0725	NA	NA
UHGV-2002820_34	Structural annotation	PF21578	NA	NA
UHGV-2002820_38	UniRef90	UniRef90_UPI001105B88F	Rho termination factor N-terminal domain-containing protein	NA
UHGV-2002820_38	Pfam	PF07498	Rho termination factor, N-terminal domain	Rho_N
UHGV-2002820_39	PHROG	phrog_4370	excisionase	integration and excision
UHGV-2002820_39	UniRef90	UniRef90_A0A1G9U323	DNA binding domain-containing protein, excisionase family	NA
UHGV-2002820_41	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-2002820_41	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2002820_41	UniRef90	UniRef90_A0A1C6GW92	Predicted transcriptional regulator	NA
UHGV-2002820_41	eggNOG-mapper	642492.Clole_0718	DNA-binding helix-turn-helix protein	NA
UHGV-2002820_41	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2002820_41	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2002820_41	Structural annotation	PF13560, MF_00535, NF007257, COG1396	NA	NA
UHGV-2002820_43	KOfam	K14059	int; integrase	NA
UHGV-2002820_43	PHROG	phrog_1	integrase	integration and excision
UHGV-2002820_43	UniRef90	UniRef90_A0A2P2BRF6	Integrase	NA
UHGV-2002820_43	eggNOG-mapper	1151292.QEW_3300	Phage integrase, N-terminal SAM-like domain	NA
UHGV-2002820_43	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-2002820_43	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-2002820_43	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2002820_43	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2002820_43	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-2002820_44	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-2002820_44	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-2002820_44	UniRef90	UniRef90_A0A174PGV9	Septum-associated FtsK-like translocase of DNA	NA
UHGV-2002820_44	eggNOG-mapper	1463900.JOIX01000030_gene4772	NA	NA
UHGV-2002820_44	PADLOC	SspH_00004	SspH	SSP
UHGV-2002820_44	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-2002820_44	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-2002820_44	Structural annotation	PF01580, MF_01836, NF041214, COG0433	NA	NA
UHGV-2002820_45	PHROG	phrog_9996	NA	unknown function
UHGV-2002820_45	UniRef90	UniRef90_UPI0011071500	replication-relaxation family protein	NA
UHGV-2002820_45	Pfam	PF13814	Replication-relaxation	Replic_Relax
UHGV-2002820_45	Structural annotation	PF13814, MF_01819, NF041423, COG1733	NA	NA
UHGV-2002820_46	UniRef90	UniRef90_B0AAA5	Serine/threonine protein phosphatase PrpC	NA
UHGV-2002820_46	eggNOG-mapper	445973.CLOBAR_02060	Protein phosphatase 2C	NA
UHGV-2002820_46	Pfam	PF13672	Protein phosphatase 2C	PP2C_2
UHGV-2002820_46	COG	COG0631	Serine/threonine protein phosphatase PrpC	NA
UHGV-2002820_48	KOfam	K03386	PRDX2_4, ahpC; peroxiredoxin 2/4 [EC:1.11.1.24]	NA
UHGV-2002820_48	PHROG	phrog_20402	NA	unknown function
UHGV-2002820_48	UniRef90	UniRef90_A0A1C5Y141	Selenocysteine-containing peroxiredoxin PrxU	NA
UHGV-2002820_48	eggNOG-mapper	445973.CLOBAR_02062	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides	NA
UHGV-2002820_48	Pfam	PF00578	AhpC/TSA family	AhpC-TSA
UHGV-2002820_48	NCBIFam	NF009668.0	peroxiredoxin	NA
UHGV-2002820_48	COG	COG0450	Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)	NA
UHGV-2002820_49	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2002820_49	PHROG	phrog_435	endolysin	lysis
UHGV-2002820_49	UniRef90	UniRef90_W1WMJ9	MurNAc-LAA domain-containing protein	NA
UHGV-2002820_49	eggNOG-mapper	445973.CLOBAR_01731	Ami_3	NA
UHGV-2002820_49	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-2002820_49	Pfam	PF19087	NA	DUF5776
UHGV-2002820_49	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2002820_49	Structural annotation	PF01520, PF19087, TIGR02883, COG0860, COG4991	NA	NA
UHGV-2002820_50	PHROG	phrog_1129	holin	lysis
UHGV-2002820_50	UniRef90	UniRef90_UPI001D164A78	phage holin family protein	NA
UHGV-2002820_50	eggNOG-mapper	1256908.HMPREF0373_00463	Phage holin family Hol44, in holin superfamily V	NA
UHGV-2002820_50	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-2002820_50	Structural annotation	PF06946	NA	NA
UHGV-2002820_51	PHROG	phrog_1193	hemolysin	other
UHGV-2002820_51	UniRef90	UniRef90_U5MTV0	Hemolysin XhlA	NA
UHGV-2002820_51	eggNOG-mapper	1345695.CLSA_c29710	Haemolysin XhlA	NA
UHGV-2002820_51	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-2002820_54	UniRef90	UniRef90_R5XQW1	Putative lipase/acylhydrolase domain-containing protein	NA
UHGV-2002820_54	Structural annotation	PF16255, MF_00169, NF007819, COG2845	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2002820	Yes	37,055 bps	28.11%	100.00%	0.9525
UHGV-1951732	No	15,937 bps	29.99%	40.02%	0.9724
UHGV-1820989	No	15,933 bps	30.01%	40.01%	0.9729
UHGV-1800534	No	15,913 bps	29.98%	39.96%	0.9746
UHGV-0211561	No	15,827 bps	29.99%	38.36%	0.9716
UHGV-2230724	No	12,551 bps	29.68%	31.52%	0.9792
UHGV-0882162	No	10,595 bps	26.12%	25.30%	0.8122