vOTU-059281

Overview

vOTU representative UHGV-2034223

No. of genomes 4

Genome length 42,324 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059281
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00013 › vGENUS-17054 › vSUBGEN-31362 › vOTU-059281
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2034223
BioSample	SAMEA2737677
Genome length	42,324 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	74
CDS density	90.38%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2034223_1	PHROG	phrog_27197	NA	unknown function
UHGV-2034223_1	eggNOG-mapper	394503.Ccel_3068	regulation of DNA-templated transcription, elongation	NA
UHGV-2034223_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-2034223_1	Structural annotation	NF007410	NA	NA
UHGV-2034223_3	Structural annotation	PF10743, NF033787	NA	NA
UHGV-2034223_4	Structural annotation	PF12270, NF040944	NA	NA
UHGV-2034223_5	Structural annotation	PF09537	NA	NA
UHGV-2034223_6	Structural annotation	PF14120	NA	NA
UHGV-2034223_7	PHROG	phrog_674	NA	unknown function
UHGV-2034223_7	UniRef90	UniRef90_A0A3A6E846	NA	NA
UHGV-2034223_7	eggNOG-mapper	556268.OFAG_00840	NA	NA
UHGV-2034223_7	Pfam	PF07083	NA	DUF1351
UHGV-2034223_7	Structural annotation	PF07083	NA	NA
UHGV-2034223_8	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2034223_8	UniRef90	UniRef90_A0A3A6EAW6	Phage recombination protein Bet	NA
UHGV-2034223_8	eggNOG-mapper	1235794.C811_01355	RecT family	NA
UHGV-2034223_8	Pfam	PF03837	RecT family	RecT
UHGV-2034223_8	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-2034223_8	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-2034223_8	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-2034223_9	UniRef90	UniRef90_UPI001CBB85F6	single-stranded DNA-binding protein	NA
UHGV-2034223_9	Structural annotation	PF00436, MF_00720, NF004512, COG0629	NA	NA
UHGV-2034223_10	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-2034223_10	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-2034223_10	UniRef90	UniRef90_A0A844D5V0	DnaD domain protein	NA
UHGV-2034223_10	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-2034223_10	Pfam	PF19808	NA	DUF6291
UHGV-2034223_10	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-2034223_10	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-2034223_10	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-2034223_11	Structural annotation	PF11417	NA	NA
UHGV-2034223_13	UniRef90	UniRef90_A0A845R8R0	NA	NA
UHGV-2034223_16	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2034223_16	UniRef90	UniRef90_A0A7J2R6L5	DNA cytosine methyltransferase (Fragment)	NA
UHGV-2034223_16	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2034223_16	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2034223_17	PHROG	phrog_757	DNA methyltransferase	other
UHGV-2034223_17	UniRef90	UniRef90_A0A417JTT5	DNA cytosine methyltransferase	NA
UHGV-2034223_17	eggNOG-mapper	1095750.HMPREF9970_0173	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-2034223_17	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2034223_18	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-2034223_18	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2034223_18	UniRef90	UniRef90_A0A6N7TND6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-2034223_18	eggNOG-mapper	875454.BAEW01000002_gene491	Endodeoxyribonuclease RusA	NA
UHGV-2034223_18	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-2034223_18	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-2034223_18	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-2034223_19	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2034223_19	PHROG	phrog_23224	DNA methyltransferase	other
UHGV-2034223_19	UniRef90	UniRef90_UPI001CBBED6E	site-specific DNA-methyltransferase	NA
UHGV-2034223_19	eggNOG-mapper	718252.FP2_06750	DNA methylase	NA
UHGV-2034223_19	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-2034223_19	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2034223_19	COG	COG0863	DNA modification methylase	NA
UHGV-2034223_19	Structural annotation	PF01555, NF010253, COG0863	NA	NA
UHGV-2034223_20	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2034223_20	UniRef90	UniRef90_A0A6N7TNN9	NA	NA
UHGV-2034223_20	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-2034223_21	UniRef90	UniRef90_UPI0018CC2891	helix-turn-helix domain-containing protein	NA
UHGV-2034223_21	eggNOG-mapper	1235790.C805_00037	NA	NA
UHGV-2034223_21	Structural annotation	PF04218	NA	NA
UHGV-2034223_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2034223_22	PHROG	phrog_10250	NA	unknown function
UHGV-2034223_22	UniRef90	UniRef90_A0A844D8I4	PBSX family phage terminase large subunit	NA
UHGV-2034223_22	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-2034223_22	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2034223_22	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-2034223_22	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2034223_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-2034223_22	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2034223_23	PHROG	phrog_64	portal protein	head and packaging
UHGV-2034223_23	UniRef90	UniRef90_A0A6N7TNT3	Phage portal protein	NA
UHGV-2034223_23	eggNOG-mapper	642492.Clole_2764	phage portal protein, SPP1	NA
UHGV-2034223_23	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2034223_23	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-2034223_25	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-2034223_25	UniRef90	UniRef90_A0A6N7TLR7	Phage_Mu_F domain-containing protein	NA
UHGV-2034223_25	eggNOG-mapper	386415.NT01CX_2177	Phage Mu protein F like protein	NA
UHGV-2034223_25	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-2034223_25	COG	COG2369	NA	NA
UHGV-2034223_25	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-2034223_26	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-2034223_26	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-2034223_26	UniRef90	UniRef90_UPI001D0E8318	helix-turn-helix transcriptional regulator	NA
UHGV-2034223_26	eggNOG-mapper	1117108.PAALTS15_13457	Transcriptional regulator	NA
UHGV-2034223_26	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2034223_26	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-2034223_26	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-2034223_27	Structural annotation	PF07342	NA	NA
UHGV-2034223_28	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-2034223_28	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-2034223_28	UniRef90	UniRef90_A0A396LJD2	Bro-N domain-containing protein	NA
UHGV-2034223_28	eggNOG-mapper	663952.SDD27957_09050	COG3617 Prophage antirepressor	NA
UHGV-2034223_28	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-2034223_28	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-2034223_28	COG	COG3617	Prophage antirepressor	NA
UHGV-2034223_28	Structural annotation	PF02498, PF03374, TIGR02681, COG3617	NA	NA
UHGV-2034223_29	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2034223_29	UniRef90	UniRef90_A0A6N7TNP6	HK97 gp10 family phage protein	NA
UHGV-2034223_29	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-2034223_29	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2034223_29	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-2034223_29	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2034223_30	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-2034223_30	UniRef90	UniRef90_A0A373Q857	YopX domain-containing protein	NA
UHGV-2034223_30	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-2034223_31	Structural annotation	PF06810	NA	NA
UHGV-2034223_32	PHROG	phrog_544	major head protein	head and packaging
UHGV-2034223_32	UniRef90	UniRef90_R0BKA1	S-l_SbsC_C domain-containing protein	NA
UHGV-2034223_32	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-2034223_32	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-2034223_34	PHROG	phrog_17977	NA	unknown function
UHGV-2034223_34	UniRef90	UniRef90_A0A844DHJ8	Phage head closure protein	NA
UHGV-2034223_34	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2034223_35	Structural annotation	PF13554	NA	NA
UHGV-2034223_36	PHROG	phrog_885	major tail protein	tail
UHGV-2034223_36	eggNOG-mapper	1111121.HMPREF1247_0789	NA	NA
UHGV-2034223_36	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-2034223_39	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-2034223_39	UniRef90	UniRef90_A0A6N7TLD3	Tape measure protein	NA
UHGV-2034223_39	eggNOG-mapper	1492737.FEM08_12070	tape measure	NA
UHGV-2034223_39	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-2034223_39	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-2034223_39	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2034223_39	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2034223_40	PHROG	phrog_3558	tail protein	tail
UHGV-2034223_40	UniRef90	UniRef90_A0A3E2U3C8	Prophage_tail domain-containing protein	NA
UHGV-2034223_40	eggNOG-mapper	411465.PEPMIC_00746	Prophage endopeptidase tail	NA
UHGV-2034223_40	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2034223_40	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2034223_40	COG	COG4926	Phage-related protein	NA
UHGV-2034223_40	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2034223_43	UniRef90	UniRef90_A0A1M6MWV9	Phage tail protein	NA
UHGV-2034223_43	eggNOG-mapper	1120933.ATUY01000004_gene1010	NA	NA
UHGV-2034223_43	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-2034223_44	eggNOG-mapper	748224.HMPREF9436_00405	domain, Protein	NA
UHGV-2034223_44	COG	COG5492	NA	NA
UHGV-2034223_46	PHROG	phrog_1382	NA	unknown function
UHGV-2034223_46	eggNOG-mapper	1410650.JHWL01000003_gene2818	NA	NA
UHGV-2034223_47	KOfam	K07273	acm; lysozyme	NA
UHGV-2034223_47	PHROG	phrog_291	endolysin	lysis
UHGV-2034223_47	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-2034223_47	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-2034223_47	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2034223_47	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-2034223_47	Structural annotation	PF01183, NF007404, COG3757	NA	NA
UHGV-2034223_48	PHROG	phrog_1863	NA	unknown function
UHGV-2034223_48	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-2034223_49	PHROG	phrog_15303	NA	unknown function
UHGV-2034223_51	Structural annotation	PF07374, MF_00245, NF001072, COG2739	NA	NA
UHGV-2034223_52	PHROG	phrog_5765	NA	unknown function
UHGV-2034223_52	UniRef90	UniRef90_UPI001D0EF465	BC1881 family protein	NA
UHGV-2034223_52	eggNOG-mapper	1095750.HMPREF9970_1008	NA	NA
UHGV-2034223_52	NCBIFam	NF033495.1	BC1881 family protein	NA
UHGV-2034223_53	PHROG	phrog_3754	NA	unknown function
UHGV-2034223_53	eggNOG-mapper	1235790.C805_00054	NA	NA
UHGV-2034223_54	PHROG	phrog_21718	NA	unknown function
UHGV-2034223_54	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-2034223_55	PHROG	phrog_22984	NA	unknown function
UHGV-2034223_56	PHROG	phrog_16490	NA	unknown function
UHGV-2034223_56	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2034223_57	PHROG	phrog_20016	NA	unknown function
UHGV-2034223_57	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-2034223_57	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-2034223_57	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2034223_58	Structural annotation	PF12510	NA	NA
UHGV-2034223_60	KOfam	K14059	int; integrase	NA
UHGV-2034223_60	PHROG	phrog_1	integrase	integration and excision
UHGV-2034223_60	UniRef90	UniRef90_A0A6N7TNQ4	Tyrosine-type recombinase/integrase	NA
UHGV-2034223_60	eggNOG-mapper	411471.SUBVAR_05137	Belongs to the 'phage' integrase family	NA
UHGV-2034223_60	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2034223_60	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2034223_60	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2034223_61	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2034223_61	UniRef90	UniRef90_A0A6N7TLT0	Helix-turn-helix domain-containing protein	NA
UHGV-2034223_61	eggNOG-mapper	266265.Bxe_A3948	Helix-turn-helix domain	NA
UHGV-2034223_61	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2034223_61	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2034223_61	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-2034223_64	eggNOG-mapper	748224.HMPREF9436_01443	vancomycin resistance protein	NA
UHGV-2034223_64	COG	COG2720	Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains	NA
UHGV-2034223_67	Structural annotation	PF21715, NF008122, COG1846	NA	NA
UHGV-2034223_68	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2034223_68	UniRef90	UniRef90_UPI001C020D87	helix-turn-helix domain-containing protein	NA
UHGV-2034223_68	eggNOG-mapper	198094.BA_3829	Helix-turn-helix XRE-family like proteins	NA
UHGV-2034223_68	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2034223_68	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2034223_68	Structural annotation	PF12844, MF_00535, NF041951, COG3655	NA	NA
UHGV-2034223_69	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2034223_69	UniRef90	UniRef90_UPI001C009F10	helix-turn-helix transcriptional regulator	NA
UHGV-2034223_69	eggNOG-mapper	699218.HMPREF0889_0208	Helix-turn-helix XRE-family like proteins	NA
UHGV-2034223_69	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2034223_69	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2034223_69	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2034223_70	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-2034223_70	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-2034223_70	UniRef90	UniRef90_A0A6N7TLD1	Phage antirepressor Ant	NA
UHGV-2034223_70	eggNOG-mapper	1230342.CTM_16892	Phage antirepressor protein	NA
UHGV-2034223_70	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-2034223_70	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-2034223_70	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-2034223_70	Structural annotation	PF03374, PF08346, TIGR02681, COG3561, COG3645	NA	NA
UHGV-2034223_71	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-2034223_71	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-2034223_73	eggNOG-mapper	1121865.OMW_01950	NA	NA
UHGV-2034223_73	Structural annotation	PF17516, NF007197	NA	NA
UHGV-2034223_74	PHROG	phrog_4433	NA	unknown function
UHGV-2034223_74	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-2034223_74	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2034223_74	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-2034223_74	Structural annotation	NF000318	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2034223	Yes	42,324 bps	54.51%	100.00%	0.9809
UHGV-1471396	No	42,407 bps	54.53%	99.90%	0.9817
UHGV-0185263	No	42,298 bps	54.50%	99.90%	0.9807
UHGV-0078027	No	24,717 bps	55.33%	58.50%	0.9819