vOTU-059312

Overview

vOTU representative UHGV-2084325

No. of genomes 2

Genome length 41,070 bps

Completeness 100.00% (complete)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059312
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00124 › vGENUS-01155 › vSUBGEN-24827 › vOTU-059312
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-2084325
BioSample	SAMEA3708542
Genome length	41,070 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	67
CDS density	90.43%
tRNA count	2
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2084325_1	KOfam	K14059	int; integrase	NA
UHGV-2084325_1	PHROG	phrog_1	integrase	integration and excision
UHGV-2084325_1	UniRef90	UniRef90_UPI0018989279	site-specific integrase	NA
UHGV-2084325_1	eggNOG-mapper	882086.SacxiDRAFT_2909	Belongs to the 'phage' integrase family	NA
UHGV-2084325_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2084325_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2084325_2	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-2084325_2	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-2084325_2	UniRef90	UniRef90_A0A2A7B6N3	HTH cro/C1-type domain-containing protein	NA
UHGV-2084325_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2084325_2	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-2084325_2	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-2084325_6	PHROG	phrog_192	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UHGV-2084325_6	eggNOG-mapper	1121864.OMO_01137	Exonuclease	NA
UHGV-2084325_6	COG	COG0847	DNA polymerase III, epsilon subunit or related 3'-5' exonuclease	NA
UHGV-2084325_7	eggNOG-mapper	1536770.R50345_07130	NA	NA
UHGV-2084325_7	Structural annotation	PF06776, COG5342	NA	NA
UHGV-2084325_9	UniRef90	UniRef90_A0A2A7AM72	HTH cro/C1-type domain-containing protein	NA
UHGV-2084325_17	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-2084325_17	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-2084325_20	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-2084325_21	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-2084325_21	eggNOG-mapper	411471.SUBVAR_05829	NA	NA
UHGV-2084325_21	Structural annotation	PF05772, NF007281	NA	NA
UHGV-2084325_24	PHROG	phrog_7566	NA	unknown function
UHGV-2084325_24	eggNOG-mapper	411471.SUBVAR_05830	NA	NA
UHGV-2084325_25	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2084325_25	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2084325_25	UniRef90	UniRef90_A0A2A7B6R5	Single-stranded DNA-binding protein	NA
UHGV-2084325_25	eggNOG-mapper	411483.FAEPRAA2165_01975	Single-stranded DNA-binding protein	NA
UHGV-2084325_25	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2084325_25	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2084325_25	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2084325_25	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2084325_25	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-2084325_26	PHROG	phrog_6969	NA	unknown function
UHGV-2084325_26	eggNOG-mapper	748224.HMPREF9436_00735	NA	NA
UHGV-2084325_26	Pfam	PF19481	NA	DUF6017
UHGV-2084325_26	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2084325_26	Structural annotation	PF19481, PF01978, MF_01819, TIGR01610, COG5625	NA	NA
UHGV-2084325_28	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2084325_28	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2084325_28	UniRef90	UniRef90_A0A2A7B6H3	AAA_31 domain-containing protein	NA
UHGV-2084325_28	eggNOG-mapper	411471.SUBVAR_05839	AAA domain	NA
UHGV-2084325_28	Pfam	PF13614	AAA domain	AAA_31
UHGV-2084325_28	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2084325_28	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-2084325_29	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2084325_29	PHROG	phrog_4715	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2084325_29	UniRef90	UniRef90_A0A2A7B6Q0	ParB domain-containing protein	NA
UHGV-2084325_29	eggNOG-mapper	411471.SUBVAR_05842	ParB-like nuclease domain	NA
UHGV-2084325_29	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2084325_29	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2084325_30	Structural annotation	PF04545	NA	NA
UHGV-2084325_34	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2084325_34	PHROG	phrog_12862	NA	unknown function
UHGV-2084325_34	UniRef90	UniRef90_UPI001AE2BBEF	site-specific DNA-methyltransferase	NA
UHGV-2084325_34	eggNOG-mapper	1474867.A0A076FIB3_9PHYC	N-methyltransferase activity	NA
UHGV-2084325_34	PADLOC	MTase_II_00037	Type II methyltransferase	RM
UHGV-2084325_34	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-2084325_35	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2084325_35	UniRef90	UniRef90_A0A2A7AM49	HNH endonuclease	NA
UHGV-2084325_35	eggNOG-mapper	349161.Dred_2609	HNH nucleases	NA
UHGV-2084325_35	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2084325_36	PHROG	phrog_13845	NA	unknown function
UHGV-2084325_36	eggNOG-mapper	1399942.U3PDR2_9CAUD	NA	NA
UHGV-2084325_36	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2084325_36	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2084325_37	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2084325_37	UniRef90	UniRef90_A0A2A7ALT4	Terminase	NA
UHGV-2084325_37	eggNOG-mapper	610130.Closa_0741	Phage Terminase	NA
UHGV-2084325_37	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2084325_37	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2084325_37	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2084325_38	PHROG	phrog_12	portal protein	head and packaging
UHGV-2084325_38	UniRef90	UniRef90_A0A2A7B6S8	Phage portal protein	NA
UHGV-2084325_38	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-2084325_38	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2084325_38	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2084325_38	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2084325_38	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2084325_39	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2084325_39	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2084325_39	UniRef90	UniRef90_UPI001C10F40E	Clp protease ClpP	NA
UHGV-2084325_39	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-2084325_39	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2084325_39	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2084325_39	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-2084325_40	PHROG	phrog_10	major head protein	head and packaging
UHGV-2084325_40	UniRef90	UniRef90_A0A2A7B712	Phage major capsid protein	NA
UHGV-2084325_40	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-2084325_40	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2084325_40	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-2084325_40	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2084325_40	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2084325_40	Structural annotation	PF05065, PF12733, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2084325_41	PHROG	phrog_749	NA	unknown function
UHGV-2084325_41	UniRef90	UniRef90_A0A7V7BBS9	Phage gp6-like head-tail connector protein	NA
UHGV-2084325_41	eggNOG-mapper	1235792.C808_00087	NA	NA
UHGV-2084325_42	PHROG	phrog_19734	NA	unknown function
UHGV-2084325_42	UniRef90	UniRef90_A0A6I7GNS7	Phage head closure protein	NA
UHGV-2084325_42	eggNOG-mapper	349161.Dred_2602	NA	NA
UHGV-2084325_42	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2084325_43	eggNOG-mapper	999413.HMPREF1094_02005	NA	NA
UHGV-2084325_43	Structural annotation	PF05657, COG3167	NA	NA
UHGV-2084325_44	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2084325_44	UniRef90	UniRef90_A0A1C6FG30	Phage protein, HK97 gp10 family	NA
UHGV-2084325_44	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-2084325_44	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2084325_44	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-2084325_44	Structural annotation	TIGR01725	NA	NA
UHGV-2084325_45	PHROG	phrog_88	major tail protein	tail
UHGV-2084325_45	UniRef90	UniRef90_A0A7U9IBX1	Phage major tail protein, phi13 family	NA
UHGV-2084325_45	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-2084325_45	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2084325_45	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2084325_47	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-2084325_47	UniRef90	UniRef90_A0A2A7ALS3	TMP_3 domain-containing protein	NA
UHGV-2084325_47	eggNOG-mapper	596328.HMPREF0578_1241	phage tail tape measure protein	NA
UHGV-2084325_47	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-2084325_47	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-2084325_47	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2084325_47	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2084325_48	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2084325_48	UniRef90	UniRef90_A0A1C6H6D2	Phage-related protein	NA
UHGV-2084325_48	eggNOG-mapper	439292.Bsel_2995	tail component	NA
UHGV-2084325_48	COG	COG4722	Phage-related protein YomH	NA
UHGV-2084325_48	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2084325_49	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2084325_49	UniRef90	UniRef90_A0A2A7AM44	Prophage_tail domain-containing protein	NA
UHGV-2084325_49	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-2084325_49	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2084325_49	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2084325_49	COG	COG4926	Phage-related protein	NA
UHGV-2084325_49	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2084325_51	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-2084325_51	PHROG	phrog_7158	NA	unknown function
UHGV-2084325_51	eggNOG-mapper	657309.BXY_05130	Calcineurin-like phosphoesterase	NA
UHGV-2084325_51	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-2084325_51	COG	COG1409	3',5'-cyclic AMP phosphodiesterase CpdA	NA
UHGV-2084325_51	Structural annotation	PF10651, PF12850, MF_00905, NF008359, NF038186, COG1409	NA	NA
UHGV-2084325_52	KOfam	K07273	acm; lysozyme	NA
UHGV-2084325_52	PHROG	phrog_291	endolysin	lysis
UHGV-2084325_52	UniRef90	UniRef90_A0A564U0D3	Autolytic lysozyme	NA
UHGV-2084325_52	eggNOG-mapper	718252.FP2_04890	hydrolase, family 25	NA
UHGV-2084325_52	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2084325_52	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-2084325_52	Structural annotation	PF01183, TIGR04053, COG3757	NA	NA
UHGV-2084325_53	PHROG	phrog_1863	NA	unknown function
UHGV-2084325_53	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-2084325_54	PHROG	phrog_15303	NA	unknown function
UHGV-2084325_56	Structural annotation	PF04545, MF_00245, NF001074, COG2739	NA	NA
UHGV-2084325_58	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-2084325_58	Structural annotation	PF13560, NF040522	NA	NA
UHGV-2084325_61	UniRef90	UniRef90_A0A1Y3R5J8	RHH_1 domain-containing protein	NA
UHGV-2084325_61	eggNOG-mapper	1160721.RBI_I00206	NA	NA
UHGV-2084325_61	Pfam	PF09274	ParG	ParG
UHGV-2084325_61	Structural annotation	PF10723	NA	NA
UHGV-2084325_64	PHROG	phrog_16490	NA	unknown function
UHGV-2084325_64	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2084325_65	eggNOG-mapper	1408437.JNJN01000043_gene802	NA	NA
UHGV-2084325_66	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-2084325_67	KOfam	K14059	int; integrase	NA
UHGV-2084325_67	PHROG	phrog_1	integrase	integration and excision
UHGV-2084325_67	eggNOG-mapper	1507.HMPREF0262_00307	Phage integrase family	NA
UHGV-2084325_67	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2084325_67	COG	COG0582	Integrase/recombinase, includes phage integrase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2084325	Yes	41,070 bps	53.95%	100.00%	0.9768
UHGV-0101635	No	36,478 bps	54.10%	90.43%	0.9764