vOTU-059326

Overview

vOTU representative UHGV-2093647

No. of genomes 10

Genome length 30,836 bps

Completeness 100.00% (complete)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059326
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00134 › vGENUS-00111 › vSUBGEN-02270 › vOTU-059326
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2093647
BioSample	NA
Genome length	30,836 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	46
CDS density	91.26%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2093647_1	UniRef90	UniRef90_A0A374N9Y2	NA	NA
UHGV-2093647_1	Structural annotation	PF10651	NA	NA
UHGV-2093647_2	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2093647_2	eggNOG-mapper	1160721.RBI_I01574	Prophage endopeptidase tail	NA
UHGV-2093647_2	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2093647_2	COG	COG4926	Phage-related protein	NA
UHGV-2093647_2	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2093647_3	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2093647_3	UniRef90	UniRef90_R6GVG8	Phage putative tail component N-domain protein	NA
UHGV-2093647_3	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-2093647_3	COG	COG4722	Phage-related protein YomH	NA
UHGV-2093647_3	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2093647_4	KOfam	K20283	GOLGA4; golgin subfamily A member 4	NA
UHGV-2093647_4	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-2093647_4	UniRef90	UniRef90_A0A412ULX0	PhageMin_Tail domain-containing protein	NA
UHGV-2093647_4	eggNOG-mapper	588581.Cpap_1264	Tail tape measure protein, TP901 family	NA
UHGV-2093647_4	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2093647_4	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2093647_4	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-2093647_5	Structural annotation	PF11836	NA	NA
UHGV-2093647_6	PHROG	phrog_88	major tail protein	tail
UHGV-2093647_6	UniRef90	UniRef90_A0A1G5CNS8	Phage major tail protein, phi13 family	NA
UHGV-2093647_6	eggNOG-mapper	1235790.C805_01798	phage major tail protein, phi13 family	NA
UHGV-2093647_6	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2093647_6	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2093647_7	UniRef90	UniRef90_UPI000E5564A4	HK97 gp10 family phage protein	NA
UHGV-2093647_7	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2093647_7	Structural annotation	TIGR01725	NA	NA
UHGV-2093647_8	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-2093647_9	PHROG	phrog_19734	NA	unknown function
UHGV-2093647_9	eggNOG-mapper	86416.Clopa_0343	NA	NA
UHGV-2093647_9	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2093647_9	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2093647_10	PHROG	phrog_749	NA	unknown function
UHGV-2093647_10	UniRef90	UniRef90_A0A1G5CMX8	Phage gp6-like head-tail connector protein	NA
UHGV-2093647_10	eggNOG-mapper	1211817.CCAT010000053_gene2133	NA	NA
UHGV-2093647_11	PHROG	phrog_10	major head protein	head and packaging
UHGV-2093647_11	UniRef90	UniRef90_A0A412ULW9	Phage major capsid protein	NA
UHGV-2093647_11	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-2093647_11	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2093647_11	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2093647_11	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2093647_11	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2093647_12	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2093647_12	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2093647_12	UniRef90	UniRef90_A0A412ULU1	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2093647_12	eggNOG-mapper	1211817.CCAT010000053_gene2131	Belongs to the peptidase S14 family	NA
UHGV-2093647_12	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2093647_12	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2093647_12	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-2093647_13	PHROG	phrog_12	portal protein	head and packaging
UHGV-2093647_13	UniRef90	UniRef90_A0A412ULV9	Phage portal protein	NA
UHGV-2093647_13	eggNOG-mapper	1415774.U728_1254	Phage portal protein	NA
UHGV-2093647_13	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2093647_13	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2093647_13	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2093647_13	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2093647_14	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2093647_14	UniRef90	UniRef90_A0A412UM03	Terminase large subunit	NA
UHGV-2093647_14	eggNOG-mapper	86416.Clopa_0337	Phage Terminase	NA
UHGV-2093647_14	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2093647_14	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2093647_14	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2093647_14	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2093647_15	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-2093647_15	UniRef90	UniRef90_A0A1M5U1D5	Phage terminase, small subunit	NA
UHGV-2093647_15	eggNOG-mapper	86416.Clopa_0336	NA	NA
UHGV-2093647_15	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2093647_15	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2093647_16	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2093647_16	UniRef90	UniRef90_A0A412ULY9	HNH endonuclease	NA
UHGV-2093647_16	eggNOG-mapper	1158607.UAU_01026	HNH endonuclease	NA
UHGV-2093647_16	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2093647_16	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2093647_17	Structural annotation	TIGR01636	NA	NA
UHGV-2093647_18	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2093647_18	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-2093647_18	Structural annotation	PF21578, NF041486	NA	NA
UHGV-2093647_22	UniRef90	UniRef90_UPI000E4DC4DA	helix-turn-helix domain-containing protein	NA
UHGV-2093647_22	Structural annotation	PF15597	NA	NA
UHGV-2093647_23	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2093647_23	UniRef90	UniRef90_A0A374DVG7	HNH endonuclease	NA
UHGV-2093647_23	eggNOG-mapper	610130.Closa_0730	HNH endonuclease	NA
UHGV-2093647_23	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2093647_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2093647_23	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-2093647_25	PHROG	phrog_824	NA	unknown function
UHGV-2093647_25	UniRef90	UniRef90_A0A3D3D6C6	VRR-NUC domain-containing protein	NA
UHGV-2093647_25	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-2093647_25	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2093647_25	Structural annotation	PF08774	NA	NA
UHGV-2093647_26	PHROG	phrog_24518	NA	unknown function
UHGV-2093647_26	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-2093647_28	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2093647_28	PHROG	phrog_6218	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2093647_28	UniRef90	UniRef90_UPI000E47CAB6	ParB/RepB/Spo0J family partition protein	NA
UHGV-2093647_28	eggNOG-mapper	394503.Ccel_3306	Belongs to the ParB family	NA
UHGV-2093647_28	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2093647_28	NCBIFam	TIGR00180.1	ParB/RepB/Spo0J family partition protein	NA
UHGV-2093647_28	COG	COG0710	3-dehydroquinate dehydratase	NA
UHGV-2093647_28	Structural annotation	PF18579, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-2093647_32	PHROG	phrog_6058	NA	unknown function
UHGV-2093647_32	Structural annotation	NF033787	NA	NA
UHGV-2093647_33	PHROG	phrog_8684	NA	unknown function
UHGV-2093647_33	UniRef90	UniRef90_UPI000E48855B	YopX family protein	NA
UHGV-2093647_33	eggNOG-mapper	1450694.BTS2_0501	YopX protein	NA
UHGV-2093647_33	Pfam	PF09643	YopX protein	YopX
UHGV-2093647_33	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-2093647_33	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-2093647_35	PHROG	phrog_585	NA	unknown function
UHGV-2093647_35	UniRef90	UniRef90_UPI00051C896C	NA	NA
UHGV-2093647_35	eggNOG-mapper	1033744.CAEL01000029_gene1306	NA	NA
UHGV-2093647_35	Pfam	PF10711	NA	DUF2513
UHGV-2093647_35	Structural annotation	PF10711, MF_01819, TIGR03433, COG3432	NA	NA
UHGV-2093647_37	UniRef90	UniRef90_A0A374DVN3	DNA-binding protein	NA
UHGV-2093647_37	eggNOG-mapper	1219626.HMPREF1639_07045	NA	NA
UHGV-2093647_38	UniRef90	UniRef90_A0A373XLN2	XRE family transcriptional regulator	NA
UHGV-2093647_38	eggNOG-mapper	1408823.AXUS01000025_gene2653	NA	NA
UHGV-2093647_38	Structural annotation	PF05339, NF007257, COG3655	NA	NA
UHGV-2093647_39	PHROG	phrog_1914	NA	unknown function
UHGV-2093647_39	UniRef90	UniRef90_UPI000E543E50	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-2093647_39	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-2093647_39	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-2093647_39	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-2093647_39	Structural annotation	PF06114, COG2856	NA	NA
UHGV-2093647_41	KOfam	K14059	int; integrase	NA
UHGV-2093647_41	PHROG	phrog_1	integrase	integration and excision
UHGV-2093647_41	UniRef90	UniRef90_A0A1G5CL52	Phage integrase family protein	NA
UHGV-2093647_41	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-2093647_41	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2093647_41	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2093647_41	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2093647_42	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2093647_42	PHROG	phrog_1794	amidase	lysis
UHGV-2093647_42	UniRef90	UniRef90_A0A373KFY8	SH3b domain-containing protein	NA
UHGV-2093647_42	eggNOG-mapper	573061.Clocel_3960	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2093647_42	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-2093647_42	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2093647_42	Structural annotation	PF01520, PF18342, NF038140, COG0860, COG4991	NA	NA
UHGV-2093647_43	PHROG	phrog_881	holin	lysis
UHGV-2093647_43	UniRef90	UniRef90_A0A4Q7P349	Dp-1 family holin	NA
UHGV-2093647_43	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-2093647_43	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-2093647_43	Structural annotation	PF16938	NA	NA
UHGV-2093647_44	PHROG	phrog_1009	NA	unknown function
UHGV-2093647_44	UniRef90	UniRef90_A0A373XMY3	Branched-chain amino acid ABC transporter permease	NA
UHGV-2093647_44	eggNOG-mapper	742765.HMPREF9457_03364	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2093647	Yes	30,836 bps	39.63%	100.00%	0.9800
UHGV-1472349	No	30,836 bps	39.63%	100.00%	0.9792
UHGV-0079082	No	36,583 bps	37.99%	99.90%	0.9736
UHGV-0124286	No	36,448 bps	39.77%	99.90%	0.9763
UHGV-1537627	No	34,083 bps	37.78%	96.87%	0.9722
UHGV-0110086	No	33,373 bps	39.20%	94.86%	0.9753
UHGV-1529151	No	32,736 bps	39.72%	93.04%	0.9770
UHGV-0181867	No	32,350 bps	38.41%	91.95%	0.9799
UHGV-1430144	No	31,039 bps	39.71%	88.22%	0.9785
UHGV-0296046	No	15,177 bps	40.16%	43.14%	0.9759