vOTU-059680

Overview

vOTU representative UHGV-2044780

No. of genomes 2

Genome length 38,115 bps

Completeness 99.27% (high-quality)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059680
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00372 › vGENUS-00435 › vSUBGEN-07265 › vOTU-059680
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2044780
BioSample	SAMEA2737743
Genome length	38,115 bps
CheckV completeness	99.27% (high-quality)
CheckV contamination	0.00%
CDS count	66
CDS density	91.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2044780_1	PHROG	phrog_12	portal protein	head and packaging
UHGV-2044780_1	UniRef90	UniRef90_A0A353J2S9	Phage portal protein (Fragment)	NA
UHGV-2044780_1	eggNOG-mapper	610130.Closa_0742	Phage portal protein, HK97 family	NA
UHGV-2044780_1	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2044780_1	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2044780_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2044780_2	UniRef90	UniRef90_UPI0018737C02	terminase large subunit	NA
UHGV-2044780_2	eggNOG-mapper	1235792.C808_00083	Phage terminase-like protein large subunit	NA
UHGV-2044780_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2044780_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2044780_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2044780_2	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2044780_3	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-2044780_3	UniRef90	UniRef90_UPI00195E8788	P27 family phage terminase small subunit	NA
UHGV-2044780_3	eggNOG-mapper	202752.JL53_00755	Phage terminase, small subunit	NA
UHGV-2044780_3	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2044780_3	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2044780_4	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2044780_4	UniRef90	UniRef90_G9YSB5	HNH domain-containing protein	NA
UHGV-2044780_4	eggNOG-mapper	574375.BAGA_00230	HNH endonuclease	NA
UHGV-2044780_4	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2044780_5	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2044780_5	eggNOG-mapper	693746.OBV_19950	NA	NA
UHGV-2044780_5	Structural annotation	PF05840	NA	NA
UHGV-2044780_10	PHROG	phrog_3136	NA	unknown function
UHGV-2044780_10	UniRef90	UniRef90_UPI001CBCD733	ASCH domain-containing protein	NA
UHGV-2044780_10	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-2044780_10	Pfam	PF04266	ASCH domain	ASCH
UHGV-2044780_10	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-2044780_10	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-2044780_13	Structural annotation	PF06657	NA	NA
UHGV-2044780_14	PHROG	phrog_924	NA	unknown function
UHGV-2044780_14	Pfam	PF04448	NA	DUF551
UHGV-2044780_14	Structural annotation	NF041588	NA	NA
UHGV-2044780_15	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2044780_15	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2044780_15	UniRef90	UniRef90_UPI001C02B0E9	single-stranded DNA-binding protein	NA
UHGV-2044780_15	eggNOG-mapper	693746.OBV_19910	Single-strand binding protein family	NA
UHGV-2044780_15	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2044780_15	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2044780_15	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2044780_15	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2044780_15	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2044780_19	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2044780_19	PHROG	phrog_27290	NA	unknown function
UHGV-2044780_19	UniRef90	UniRef90_UPI00195EFCA8	helix-turn-helix domain-containing protein	NA
UHGV-2044780_19	eggNOG-mapper	742738.HMPREF9460_00856	ParB-like nuclease domain	NA
UHGV-2044780_19	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2044780_19	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2044780_19	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2044780_19	Structural annotation	PF12961, PF02195, MF_02015, MF_00684, TIGR04285, NF003443, COG1475, COG3097	NA	NA
UHGV-2044780_20	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2044780_20	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2044780_20	UniRef90	UniRef90_UPI001BB48231	ParA family protein	NA
UHGV-2044780_20	eggNOG-mapper	693746.OBV_19850	Anion-transporting ATPase	NA
UHGV-2044780_20	Pfam	PF13614	AAA domain	AAA_31
UHGV-2044780_20	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2044780_20	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-2044780_22	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-2044780_22	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-2044780_22	UniRef90	UniRef90_UPI00195856D7	AAA family ATPase	NA
UHGV-2044780_22	eggNOG-mapper	1226322.HMPREF1545_00095	DnaB-like helicase N terminal domain	NA
UHGV-2044780_22	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-2044780_22	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-2044780_22	COG	COG0305	Replicative DNA helicase	NA
UHGV-2044780_22	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-2044780_23	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2044780_23	UniRef90	UniRef90_A0A7X3DHC7	Helix-turn-helix domain-containing protein	NA
UHGV-2044780_23	eggNOG-mapper	1007096.BAGW01000033_gene1617	ROK family	NA
UHGV-2044780_23	COG	COG3355	Predicted transcriptional regulator	NA
UHGV-2044780_23	Structural annotation	PF04182, NF040939, COG3355	NA	NA
UHGV-2044780_24	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-2044780_24	UniRef90	UniRef90_UPI001C01DF91	helix-turn-helix transcriptional regulator	NA
UHGV-2044780_24	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-2044780_24	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-2044780_24	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-2044780_24	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-2044780_25	Structural annotation	PF12728, NF040990	NA	NA
UHGV-2044780_26	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-2044780_26	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2044780_26	UniRef90	UniRef90_UPI00030EB95F	helix-turn-helix domain-containing protein	NA
UHGV-2044780_26	eggNOG-mapper	1007096.BAGW01000011_gene2356	sequence-specific DNA binding	NA
UHGV-2044780_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2044780_26	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2044780_26	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-2044780_27	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2044780_27	UniRef90	UniRef90_A0A096AZX4	HTH cro/C1-type domain-containing protein	NA
UHGV-2044780_27	eggNOG-mapper	742738.HMPREF9460_04038	sequence-specific DNA binding	NA
UHGV-2044780_27	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2044780_27	Structural annotation	PF12844, MF_02017, NF041951, COG1396	NA	NA
UHGV-2044780_28	UniRef90	UniRef90_UPI001956EF77	stalk domain-containing protein	NA
UHGV-2044780_28	eggNOG-mapper	1226322.HMPREF1545_01476	Copper amine oxidase N-terminal domain	NA
UHGV-2044780_28	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-2044780_29	PHROG	phrog_17982	NA	unknown function
UHGV-2044780_29	UniRef90	UniRef90_UPI00195DC4C4	NA	NA
UHGV-2044780_29	eggNOG-mapper	632245.CLP_2952	cell wall binding repeat	NA
UHGV-2044780_29	Pfam	PF14020	NA	DUF4236
UHGV-2044780_29	COG	COG5263	Glucan-binding domain (YG repeat)	NA
UHGV-2044780_29	Structural annotation	PF14020	NA	NA
UHGV-2044780_30	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2044780_30	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2044780_30	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-2044780_31	KOfam	K14059	int; integrase	NA
UHGV-2044780_31	PHROG	phrog_1	integrase	integration and excision
UHGV-2044780_31	UniRef90	UniRef90_A0A1H8A220	Site-specific recombinase XerD	NA
UHGV-2044780_31	eggNOG-mapper	1203606.HMPREF1526_00215	Phage integrase family	NA
UHGV-2044780_31	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2044780_31	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2044780_31	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-2044780_32	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-2044780_34	PHROG	phrog_20016	NA	unknown function
UHGV-2044780_34	UniRef90	UniRef90_A0A2Z4QB67	Carbohydrate binding domain/collagen triple helix repeat protein	NA
UHGV-2044780_34	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-2044780_34	Structural annotation	PF18573, NF033147	NA	NA
UHGV-2044780_35	PHROG	phrog_16490	NA	unknown function
UHGV-2044780_35	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-2044780_36	PHROG	phrog_22984	NA	unknown function
UHGV-2044780_37	PHROG	phrog_21718	NA	unknown function
UHGV-2044780_37	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-2044780_38	PHROG	phrog_3754	NA	unknown function
UHGV-2044780_38	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-2044780_41	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-2044780_41	UniRef90	UniRef90_A0A096AZ46	HTH cro/C1-type domain-containing protein	NA
UHGV-2044780_41	eggNOG-mapper	742738.HMPREF9460_04059	Helix-turn-helix XRE-family like proteins	NA
UHGV-2044780_41	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2044780_41	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2044780_41	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-2044780_42	eggNOG-mapper	742738.HMPREF9460_04058	NA	NA
UHGV-2044780_43	Structural annotation	PF04545, MF_00674, NF008895, COG1342	NA	NA
UHGV-2044780_44	PHROG	phrog_21357	endolysin	lysis
UHGV-2044780_44	UniRef90	UniRef90_UPI001C00DA69	CHAP domain-containing protein	NA
UHGV-2044780_44	eggNOG-mapper	1007096.BAGW01000017_gene816	CHAP domain	NA
UHGV-2044780_44	Pfam	PF05257	CHAP domain	CHAP
UHGV-2044780_44	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2044780_44	Structural annotation	PF06672, TIGR02594, COG4322	NA	NA
UHGV-2044780_46	PHROG	phrog_1129	holin	lysis
UHGV-2044780_46	UniRef90	UniRef90_UPI001C0F421C	phage holin family protein	NA
UHGV-2044780_46	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-2044780_46	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-2044780_46	Structural annotation	PF06946	NA	NA
UHGV-2044780_47	PHROG	phrog_1863	NA	unknown function
UHGV-2044780_47	eggNOG-mapper	748224.HMPREF9436_00408	NA	NA
UHGV-2044780_49	PHROG	phrog_1382	NA	unknown function
UHGV-2044780_49	eggNOG-mapper	1336234.JAGN01000004_gene512	NA	NA
UHGV-2044780_51	eggNOG-mapper	742738.HMPREF9460_01382	NA	NA
UHGV-2044780_51	Structural annotation	PF13620, NF040788, COG2512	NA	NA
UHGV-2044780_52	PHROG	phrog_18725	NA	unknown function
UHGV-2044780_52	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-2044780_52	Structural annotation	PF13754, COG2372	NA	NA
UHGV-2044780_53	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-2044780_53	PHROG	phrog_11157	NA	unknown function
UHGV-2044780_53	UniRef90	UniRef90_UPI001C10C6DC	Ig-like domain-containing protein	NA
UHGV-2044780_53	eggNOG-mapper	1232446.BAIE02000011_gene1582	NA	NA
UHGV-2044780_53	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-2044780_53	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-2044780_53	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-2044780_53	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-2044780_55	PHROG	phrog_13879	NA	unknown function
UHGV-2044780_55	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-2044780_55	Structural annotation	PF14594, PF06588, NF033848, COG4379, COG5156	NA	NA
UHGV-2044780_56	eggNOG-mapper	1235797.C816_02660	NA	NA
UHGV-2044780_56	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-2044780_57	KOfam	K10398	KIF11, EG5; kinesin family member 11	NA
UHGV-2044780_57	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-2044780_57	UniRef90	UniRef90_A0A373CK98	PblA (Fragment)	NA
UHGV-2044780_57	eggNOG-mapper	1216932.CM240_0625	tape measure	NA
UHGV-2044780_57	COG	COG5283	Phage-related tail protein	NA
UHGV-2044780_58	eggNOG-mapper	665950.HMPREF1025_02659	NA	NA
UHGV-2044780_58	Structural annotation	PF11836	NA	NA
UHGV-2044780_59	PHROG	phrog_88	major tail protein	tail
UHGV-2044780_59	UniRef90	UniRef90_UPI0018771F27	phage tail protein	NA
UHGV-2044780_59	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-2044780_59	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2044780_59	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-2044780_60	UniRef90	UniRef90_R6UNR2	HK97 gp10 family phage protein	NA
UHGV-2044780_60	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-2044780_60	Structural annotation	TIGR01725	NA	NA
UHGV-2044780_61	eggNOG-mapper	1235798.C817_04588	NA	NA
UHGV-2044780_61	Structural annotation	PF05657, COG3167	NA	NA
UHGV-2044780_62	PHROG	phrog_19734	NA	unknown function
UHGV-2044780_62	UniRef90	UniRef90_A0A6I7GNS7	Phage head closure protein	NA
UHGV-2044780_62	eggNOG-mapper	349161.Dred_2602	NA	NA
UHGV-2044780_62	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2044780_63	PHROG	phrog_749	NA	unknown function
UHGV-2044780_63	eggNOG-mapper	86416.Clopa_0342	NA	NA
UHGV-2044780_64	PHROG	phrog_10	major head protein	head and packaging
UHGV-2044780_64	UniRef90	UniRef90_G9YSC0	Cadherin-like domain-containing protein	NA
UHGV-2044780_64	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-2044780_64	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2044780_64	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-2044780_64	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2044780_64	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2044780_64	Structural annotation	PF05065, PF12733, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2044780_65	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2044780_65	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2044780_65	UniRef90	UniRef90_A0A1Y4BT12	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2044780_65	eggNOG-mapper	349161.Dred_2605	Belongs to the peptidase S14 family	NA
UHGV-2044780_65	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2044780_65	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2044780_65	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-2044780_66	PHROG	phrog_12	portal protein	head and packaging
UHGV-2044780_66	UniRef90	UniRef90_G9YSB8	Phage portal protein, HK97 family	NA
UHGV-2044780_66	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-2044780_66	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2044780_66	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2044780_66	Structural annotation	PF04860, TIGR01537, COG4695	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2044780	Yes	38,115 bps	58.65%	99.27%	0.9817
UHGV-1749682	No	13,515 bps	59.26%	35.18%	0.9807