vOTU-059853

Overview

vOTU representative UHGV-1982132

No. of genomes 3

Genome length 35,553 bps

Completeness 99.90% (high-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-059853
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00033 › vGENUS-00350 › vSUBGEN-12883 › vOTU-059853
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1982132
BioSample	SAMN03922515
Genome length	35,553 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	48
CDS density	91.43%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1982132_1	KOfam	K01681	ACO, acnA; aconitate hydratase [EC:4.2.1.3]	NA
UHGV-1982132_1	PHROG	phrog_17467	NA	unknown function
UHGV-1982132_1	UniRef90	UniRef90_D4K5R8	Aconitase A	NA
UHGV-1982132_1	eggNOG-mapper	748224.HMPREF9436_00126	aconitate hydratase	NA
UHGV-1982132_1	Pfam	PF00330	Aconitase family (aconitate hydratase)	Aconitase
UHGV-1982132_1	COG	COG1048	Aconitase A	NA
UHGV-1982132_2	KOfam	K14059	int; integrase	NA
UHGV-1982132_2	PHROG	phrog_1	integrase	integration and excision
UHGV-1982132_2	UniRef90	UniRef90_A0A316RZQ6	Tyr recombinase domain-containing protein	NA
UHGV-1982132_2	eggNOG-mapper	693746.OBV_25530	Phage integrase family	NA
UHGV-1982132_2	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1982132_2	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1982132_2	Structural annotation	PF00589, PF14659, MF_01808, NF007246, COG4973	NA	NA
UHGV-1982132_3	eggNOG-mapper	748224.HMPREF9436_01443	vancomycin resistance protein	NA
UHGV-1982132_3	COG	COG2720	Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains	NA
UHGV-1982132_5	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1982132_5	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1982132_5	UniRef90	UniRef90_E2ZIF0	DNA-binding helix-turn-helix protein	NA
UHGV-1982132_5	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-1982132_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1982132_5	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1982132_5	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1982132_6	PHROG	phrog_14088	NA	unknown function
UHGV-1982132_6	UniRef90	UniRef90_UPI001D07CB3C	carboxypeptidase	NA
UHGV-1982132_6	eggNOG-mapper	1235802.C823_04730	NA	NA
UHGV-1982132_7	PHROG	phrog_1305	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1982132_7	UniRef90	UniRef90_A0A3A6EAL3	NA	NA
UHGV-1982132_7	eggNOG-mapper	748224.HMPREF9436_01446	NA	NA
UHGV-1982132_7	Pfam	PF13643	NA	DUF4145
UHGV-1982132_11	UniRef90	UniRef90_A0A2A7BGV7	HTH cro/C1-type domain-containing protein	NA
UHGV-1982132_11	Pfam	PF05339	NA	DUF739
UHGV-1982132_11	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-1982132_11	Structural annotation	PF05339, MF_00535, NF041951, COG3655	NA	NA
UHGV-1982132_13	Structural annotation	PF12270, NF040944	NA	NA
UHGV-1982132_15	UniRef90	UniRef90_UPI001D0E65C2	NA	NA
UHGV-1982132_15	Structural annotation	PF12957	NA	NA
UHGV-1982132_16	PHROG	phrog_1733	NA	unknown function
UHGV-1982132_16	UniRef90	UniRef90_UPI00196846D9	cell envelope integrity protein TolA	NA
UHGV-1982132_16	eggNOG-mapper	665956.HMPREF1032_03597	DNA binding	NA
UHGV-1982132_16	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1982132_17	KOfam	K03546	sbcC, rad50; DNA repair protein SbcC/Rad50	NA
UHGV-1982132_17	PHROG	phrog_1499	NA	unknown function
UHGV-1982132_17	UniRef90	UniRef90_A0A3A6KBP8	Chromosome segregation protein SMC	NA
UHGV-1982132_17	eggNOG-mapper	1235798.C817_04766	AAA ATPase domain	NA
UHGV-1982132_17	Pfam	PF13476	AAA domain	AAA_23
UHGV-1982132_17	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1982132_17	Structural annotation	PF11398, MF_00365, TIGR00634, COG0497	NA	NA
UHGV-1982132_18	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1982132_18	UniRef90	UniRef90_UPI00122C2B12	ATP-binding protein	NA
UHGV-1982132_18	eggNOG-mapper	645991.Sgly_0321	AAA domain	NA
UHGV-1982132_18	Pfam	PF13479	AAA domain	AAA_24
UHGV-1982132_18	Structural annotation	PF13479, MF_00268, TIGR01618, COG0468	NA	NA
UHGV-1982132_19	PHROG	phrog_2698	NA	unknown function
UHGV-1982132_19	UniRef90	UniRef90_A0A291T9B6	NA	NA
UHGV-1982132_19	eggNOG-mapper	394503.Ccel_3308	NA	NA
UHGV-1982132_19	Structural annotation	PF05037	NA	NA
UHGV-1982132_20	KOfam	K17677	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	NA
UHGV-1982132_20	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1982132_20	UniRef90	UniRef90_A0A3A6K1C0	DEAD/DEAH box helicase	NA
UHGV-1982132_20	eggNOG-mapper	610130.Closa_1369	DEAD-like helicases superfamily	NA
UHGV-1982132_20	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-1982132_20	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-1982132_20	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-1982132_20	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-1982132_20	Structural annotation	PF04851, PF16203, MF_01489, NF008521, COG1061	NA	NA
UHGV-1982132_21	KOfam	K07505	repA; regulatory protein RepA	NA
UHGV-1982132_21	PHROG	phrog_2597	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1982132_21	UniRef90	UniRef90_A0A2A6Z731	DNA primase	NA
UHGV-1982132_21	eggNOG-mapper	742738.HMPREF9460_01357	Primase C terminal 2 (PriCT-2)	NA
UHGV-1982132_21	Pfam	PF08707	Primase C terminal 2 (PriCT-2)	PriCT_2
UHGV-1982132_21	Pfam	PF13481	AAA domain	AAA_25
UHGV-1982132_21	COG	COG3598	RecA-family ATPase	NA
UHGV-1982132_21	Structural annotation	PF13481, PF16793, PF08220, MF_00350, MF_00700, NF006606, NF001641, COG3598, COG3285	NA	NA
UHGV-1982132_22	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1982132_22	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1982132_22	UniRef90	UniRef90_UPI00122CFAB3	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1982132_22	eggNOG-mapper	478749.BRYFOR_07588	endodeoxyribonuclease RusA	NA
UHGV-1982132_22	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-1982132_22	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1982132_22	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-1982132_23	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1982132_23	UniRef90	UniRef90_A0A3A6JSY6	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-1982132_23	eggNOG-mapper	748224.HMPREF9436_01463	NA	NA
UHGV-1982132_23	Structural annotation	PF04545, MF_00674, NF005248, COG1595	NA	NA
UHGV-1982132_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1982132_25	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1982132_25	UniRef90	UniRef90_A0A844EGH8	PBSX family phage terminase large subunit	NA
UHGV-1982132_25	eggNOG-mapper	1449050.JNLE01000003_gene3895	phage terminase, large subunit, PBSX family	NA
UHGV-1982132_25	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1982132_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-1982132_25	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1982132_26	PHROG	phrog_533	portal protein	head and packaging
UHGV-1982132_26	UniRef90	UniRef90_A0A7G9WF85	Phage portal protein	NA
UHGV-1982132_26	eggNOG-mapper	718252.FP2_06700	NA	NA
UHGV-1982132_26	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1982132_27	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1982132_27	UniRef90	UniRef90_UPI001C0164DE	phage minor capsid protein	NA
UHGV-1982132_27	eggNOG-mapper	718252.FP2_06690	NA	NA
UHGV-1982132_27	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1982132_27	COG	COG2369	NA	NA
UHGV-1982132_27	Structural annotation	PF06152, PF12106	NA	NA
UHGV-1982132_28	PHROG	phrog_27009	NA	unknown function
UHGV-1982132_29	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1982132_29	UniRef90	UniRef90_D4K444	Phage minor structural protein GP20	NA
UHGV-1982132_29	eggNOG-mapper	748224.HMPREF9436_03336	Phage minor structural protein GP20	NA
UHGV-1982132_29	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1982132_29	Structural annotation	PF06810	NA	NA
UHGV-1982132_30	PHROG	phrog_267	major head protein	head and packaging
UHGV-1982132_30	UniRef90	UniRef90_A0A0D8J2H9	p22 coat protein 5	NA
UHGV-1982132_30	eggNOG-mapper	718252.FP2_06660	NA	NA
UHGV-1982132_30	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1982132_31	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1982132_32	PHROG	phrog_3366	NA	unknown function
UHGV-1982132_32	Pfam	PF20536	NA	DUF6751
UHGV-1982132_32	Structural annotation	PF20536	NA	NA
UHGV-1982132_33	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1982132_33	UniRef90	UniRef90_UPI000B10EF5E	minor capsid protein	NA
UHGV-1982132_33	eggNOG-mapper	718252.FP2_06630	Minor capsid protein	NA
UHGV-1982132_33	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1982132_33	Structural annotation	PF11114	NA	NA
UHGV-1982132_34	PHROG	phrog_3266	tail completion	connector
UHGV-1982132_34	UniRef90	UniRef90_A0A848BCA5	Chloramphenicol resistance protein	NA
UHGV-1982132_34	eggNOG-mapper	748224.HMPREF9436_03331	NA	NA
UHGV-1982132_34	Structural annotation	PF12691	NA	NA
UHGV-1982132_35	PHROG	phrog_820	major tail protein	tail
UHGV-1982132_35	eggNOG-mapper	748224.HMPREF9436_03330	NA	NA
UHGV-1982132_35	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1982132_36	PHROG	phrog_4450	NA	unknown function
UHGV-1982132_36	Structural annotation	PF20378	NA	NA
UHGV-1982132_37	PHROG	phrog_706	NA	unknown function
UHGV-1982132_37	UniRef90	UniRef90_E2ZNP9	Bacteriophage Gp15 protein	NA
UHGV-1982132_37	eggNOG-mapper	748224.HMPREF9436_03328	Bacteriophage Gp15 protein	NA
UHGV-1982132_37	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1982132_37	Structural annotation	PF06854	NA	NA
UHGV-1982132_38	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-1982132_38	UniRef90	UniRef90_A0A3F3JUJ4	TMP_3 domain-containing protein	NA
UHGV-1982132_38	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-1982132_38	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-1982132_38	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1982132_38	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1982132_39	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-1982132_39	eggNOG-mapper	748224.HMPREF9436_03326	Phage tail tape measure protein, TP901 family	NA
UHGV-1982132_39	COG	COG5283	Phage-related tail protein	NA
UHGV-1982132_40	PHROG	phrog_36410	NA	unknown function
UHGV-1982132_40	UniRef90	UniRef90_UPI00130E98E0	phage tail family protein	NA
UHGV-1982132_40	eggNOG-mapper	748224.HMPREF9436_03325	Phage tail protein	NA
UHGV-1982132_40	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1982132_41	PHROG	phrog_538	minor tail protein	tail
UHGV-1982132_41	UniRef90	UniRef90_UPI001899858F	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1982132_41	eggNOG-mapper	748224.HMPREF9436_03324	NA	NA
UHGV-1982132_41	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1982132_41	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1982132_42	PHROG	phrog_9534	head protein	head and packaging
UHGV-1982132_42	eggNOG-mapper	748224.HMPREF9436_03323	COG NOG18825 non supervised orthologous group	NA
UHGV-1982132_42	Structural annotation	PF21567	NA	NA
UHGV-1982132_43	PHROG	phrog_2310	NA	unknown function
UHGV-1982132_44	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-1982132_44	PHROG	phrog_894	endolysin	lysis
UHGV-1982132_44	UniRef90	UniRef90_A0A1C5NY12	Zinc D-Ala-D-Ala carboxypeptidase	NA
UHGV-1982132_44	eggNOG-mapper	748224.HMPREF9436_03320	Peptidase M15	NA
UHGV-1982132_44	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-1982132_44	COG	COG3108	NA	NA
UHGV-1982132_44	Structural annotation	PF05951, COG3108	NA	NA
UHGV-1982132_45	PHROG	phrog_199	holin	lysis
UHGV-1982132_45	UniRef90	UniRef90_A0A2A6Z8T2	Holin	NA
UHGV-1982132_45	eggNOG-mapper	742740.HMPREF9474_02333	Bacteriophage holin family	NA
UHGV-1982132_45	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1982132_45	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1982132_45	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1982132_45	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1982132_46	PHROG	phrog_13712	holin	lysis
UHGV-1982132_46	eggNOG-mapper	397291.C804_01108	NA	NA
UHGV-1982132_46	Structural annotation	PF09682, TIGR01673	NA	NA
UHGV-1982132_48	KOfam	K00763	pncB, NAPRT1; nicotinate phosphoribosyltransferase [EC:6.3.4.21]	NA
UHGV-1982132_48	UniRef90	UniRef90_A0A316LYV5	Nicotinate phosphoribosyltransferase	NA
UHGV-1982132_48	eggNOG-mapper	657322.FPR_28390	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP	NA
UHGV-1982132_48	Pfam	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain	NAPRTase_C
UHGV-1982132_48	COG	COG1488	Nicotinic acid phosphoribosyltransferase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1982132	Yes	35,553 bps	60.66%	99.90%	0.9789
UHGV-2200600	No	22,449 bps	61.59%	64.19%	0.9798
UHGV-1981174	No	15,439 bps	61.83%	44.17%	0.9813